Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916710
Identifier: 220916710
GI number: 220916710
Start: 1793909
End: 1794640
Strand: Reverse
Name: 220916710
Synonym: A2cp1_1604
Alternate gene names: NA
Gene position: 1794640-1793909 (Counterclockwise)
Preceding gene: 220916711
Following gene: 220916709
Centisome position: 35.68
GC content: 83.74
Gene sequence:
>732_bases GTGACCGCGGGGCAAGCGCCCAGGGTCCGCGGCCCGCTCGCCGGCGCCGCCGCGGCCTCGCTCCTGCTGCACGCGGCGAT CCTCGCCGCGGCGCTGCGCCTCCCCCAGAGGCCCCGCGAGCGGCCCGCGCCGGTGGTGGTGGACCTCGAGGCCGCGCCGC CGCCGGCCCCGCCGCCCGCCCCGGAGCCGCCCGCCCCTCCACCTCCGCCGCGCCGGGTCGCCGCCGCGGCGCTCCCACCG CCGCGCCCGATCCCGGCGCCGCCCGCGCCGGCGCCGCCGCCGCCCCCGGACGCGCCCGCACCCTCGCCCGCGCCGGCCCG CGCGCCGCGCGTGGGCATCTCGCTCTCGTCCACCACCACCGCGGGCGGCTTCGCGGTGGGCACCGGCGAGACGCTCGCGG GCCGCCCTCGCGAGGTCGCCGACGCGCCGGAGCCGGCCCGGCCGCTCCCCGCCGCGCCGCGGCCCTCGGCGCAGCCGCGG CTGGTGGCGCGACCGGAGATGCCCTACCCGCCCGACGCCCGCCGCGCCGGTCTGGAGGGCCGGGTGGTGCTGCTCCTGCG CGTCGATCGGGAGGGGCGCGTGGCCGCGGCGCGCGTGCTCTCGGAGCCGGGCGGCGGGCTCGGCGCGGCGGCCCGCGCGG CCGCGCTCGGCTTCCGCTTCCAGCCGGCGCTGCTCGAGGGCGAGCCGGTCGAGACCGAGATCCGCTTCACCTACACCTTC GTCCTGGAGTGA
Upstream 100 bases:
>100_bases CCTCGCACGGCGCGGTGGTGTCGCTCATCGACCTGGTGAAGACCGAGGGGCTCACCCGCTTCGCCCTCCAGATCGAGCGC GAGGACGCGGGGGCGGCGCG
Downstream 100 bases:
>100_bases ACCCATGATCCGCCTCCTCACGCTCGCCGTCGCGCTCGTCGCGGCGGCGCCTCCCCTCGCTCGCGCCGGCGAGGGCGAGG GCGCCCTGACCCGCGCACCG
Product: TonB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTAGQAPRVRGPLAGAAAASLLLHAAILAAALRLPQRPRERPAPVVVDLEAAPPPAPPPAPEPPAPPPPPRRVAAAALPP PRPIPAPPAPAPPPPPDAPAPSPAPARAPRVGISLSSTTTAGGFAVGTGETLAGRPREVADAPEPARPLPAAPRPSAQPR LVARPEMPYPPDARRAGLEGRVVLLLRVDREGRVAAARVLSEPGGGLGAAARAAALGFRFQPALLEGEPVETEIRFTYTF VLE
Sequences:
>Translated_243_residues MTAGQAPRVRGPLAGAAAASLLLHAAILAAALRLPQRPRERPAPVVVDLEAAPPPAPPPAPEPPAPPPPPRRVAAAALPP PRPIPAPPAPAPPPPPDAPAPSPAPARAPRVGISLSSTTTAGGFAVGTGETLAGRPREVADAPEPARPLPAAPRPSAQPR LVARPEMPYPPDARRAGLEGRVVLLLRVDREGRVAAARVLSEPGGGLGAAARAAALGFRFQPALLEGEPVETEIRFTYTF VLE >Mature_242_residues TAGQAPRVRGPLAGAAAASLLLHAAILAAALRLPQRPRERPAPVVVDLEAAPPPAPPPAPEPPAPPPPPRRVAAAALPPP RPIPAPPAPAPPPPPDAPAPSPAPARAPRVGISLSSTTTAGGFAVGTGETLAGRPREVADAPEPARPLPAAPRPSAQPRL VARPEMPYPPDARRAGLEGRVVLLLRVDREGRVAAARVLSEPGGGLGAAARAAALGFRFQPALLEGEPVETEIRFTYTFV LE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24753; Mature: 24622
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGQAPRVRGPLAGAAAASLLLHAAILAAALRLPQRPRERPAPVVVDLEAAPPPAPPPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC PEPPAPPPPPRRVAAAALPPPRPIPAPPAPAPPPPPDAPAPSPAPARAPRVGISLSSTTT CCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC AGGFAVGTGETLAGRPREVADAPEPARPLPAAPRPSAQPRLVARPEMPYPPDARRAGLEG CCCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCC RVVLLLRVDREGRVAAARVLSEPGGGLGAAARAAALGFRFQPALLEGEPVETEIRFTYTF CEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEE VLE EEC >Mature Secondary Structure TAGQAPRVRGPLAGAAAASLLLHAAILAAALRLPQRPRERPAPVVVDLEAAPPPAPPPA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC PEPPAPPPPPRRVAAAALPPPRPIPAPPAPAPPPPPDAPAPSPAPARAPRVGISLSSTTT CCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC AGGFAVGTGETLAGRPREVADAPEPARPLPAAPRPSAQPRLVARPEMPYPPDARRAGLEG CCCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCC RVVLLLRVDREGRVAAARVLSEPGGGLGAAARAAALGFRFQPALLEGEPVETEIRFTYTF CEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEE VLE EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA