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The map label for this gene is clpE [H]

Identifier: 220916657

GI number: 220916657

Start: 1731173

End: 1733614

Strand: Reverse

Name: clpE [H]

Synonym: A2cp1_1551

Alternate gene names: 220916657

Gene position: 1733614-1731173 (Counterclockwise)

Preceding gene: 220916669

Following gene: 220916656

Centisome position: 34.47

GC content: 76.82

Gene sequence:

>2442_bases
ATGGCCACGGTCATCGAGTCGATGGAGCTCCTGCAGGTCCTGGCCGAGGCCGAGGACATCGCACGGAGCGTCAACCAGAA
GCTCACCAGCGCGCACCAGCTCCTCGCCTTCTTCACCGTGCCCAACCGCGCGGAGGTCCTGCTCCGGGATCGCGGCATCG
ACGAGGACCGCATCCTGCTCGCCATGACCGGCGCGCCCCGCGAGCCGGAGGGCGTCGAGCGCGACCTCCGCGAGCGCGCG
CGGGACGTGGCCGAGGGCGTGGGCGCCGAGGAGGTGGACTGCCTGCACCTGCTCATCGCCATGAGCCGGGTCCGCGGCGC
CGCCGCCCACCAGCTGCTCGCCGCCTGCGGGCTGCAGCTCGCCTCGCTGCGCAACATCGCGCTGTCCTACTTCACCGCCC
GCATGCCGCGCCGGCTCCGCCAGCTCCAGCCGGTGAAGGTGGGCCCGGCGGCCGGCGCGACCGCCCCCCCGGCCCCGCGG
CGAGGCGCCGACGCGCCGCCCGCGGACGACCTCGACGATCGGCTGGAGGACGCGCTCGGTGAGGCCCCGGCCCTCACCCC
CGCCCCCGCCGCGACCCCGGCGCCCGCGGCGCCCCCGCTCGCCGCCGCCGAGCCTCGCGCCGCCGCGGCGGCCGCGGCCC
CCGCCCGCCGCAACGGCCCGCACGCGCTCGACCCCAAGGTCTTCCCCTGGCTCTCGCAGCTCGGCCGCAACCTCACCGAG
CTCGCCGCGGCCGGCAAGCTCGACCCGCTGGTCGGGCGCGAGCGCGAGGTGGAGGAGGCCATCGACGTCCTCGGCAAGCG
CCGCACCAACAACCCGCTGCTGGTGGGCGAGCCGGGCGTGGGCAAGACCGCCATCGTCGAGGGCATCGCGCAGCGGCTGC
TCGCCTCGGCGGGCCAGGCCCGCGAGCGGATCCTGGTCGAGATCGACATGGCGAGCGTGGTGGCCGGCACCCAGCTCCGC
GGCGCGTTCTCCGAGAAGCTCCTCGGCATCAAGGAGGAGGTCCGCAAGGCCGGCGGCCGGGTGGTGGTGTTCATCGACGA
GGTGCACACGCTCATGGGCGCGGGCGCCGCCGGCGAGGGGCCGCAGGACGCCGCCAACGAGCTGAAGGCGGCGCTGGCGC
GCGGCGAGTTCCCCTGCATCGGCGCCACCACGCACGACGAGTACCGCCAGCACATCGAGAAGGACCCGGCGCTGGAGCGC
CGCTTCACCCCGGTGCTGGTGCGGGAGCCGTCGGTGGCCGACACCGTCACCATCCTGCGCGGGCTCGCCCCCCGCTACGA
GAAGCACCACCAGGTGGCCTACGCGCCGGAGGCGCTCGAGGCCGCCGCCACGCTCTCCGCCCGCCACGTCACCGACCGCT
TCCTGCCCGACAAGGCGGTGGCGGTGCTCGACCTGGCCGGCTCGCGCGCGCACCGCGCCGGCCAGCGGCAGGTCGGCGAG
CGCGAGGTGGCGCAGGTGGTGGCGAAGATGGCGGGCATCCCCGAGTCGCGGCTCCTCGCCTCGGATCGCGAGCGGATCCT
GGGCATCGAGGCGGCGCTGGCCGCCCGGGTGGTGGGGCACGCCGACGCGGTGGCCCGCGTCGCCGGGGTGCTGAAGCGCA
ACTTCGCCGGGTTCGCGTCGCGCCGGCCCATGGGCTCGTTCCTGCTGCTCGGGCCGACCGGCGTGGGCAAGACCGAGCTG
GCCCGCGCGCTCGCCGACGCGCTGTACGGGTCCGCCGACGCGCTGGTGCAGCTCGACATGACCGAGTGCGCCGAGCAGAC
CGGCGTGGCGCGGCTGGTGGGCGCCGCGCCCGGCTACGTGGGCTACGGCGAGGGCGGGCAGCTCACCGACGCGGTCCGCC
GCCGGCCGGCGTCGGTGGTGGTGCTCGACGAGATCGAGAAGGCGCACCGCGACGTGCAGATGCTGCTCCTGCAGATCCTG
GAGGAGGGCCGGCTCACCGACGGGCGCGGGCGGCTGGTGGACTTCTCCAACACCGTGGTGGTGCTCACCTCCAACCTGGG
CGCCGCCGAGGCCACCCGGACCTCCACCGGCACCCTGGGCTTCGGCGCCGCCGACCGGGCCGCGCCGCGCGAGGACCGCG
CGCTGGCGGCCGCCCGGGGCGCGGTGCCGCCGGAGCTGTGGAACCGGCTGGACGAGCGGCTCGTGCTCGCGCCGCTGGCC
CGCGGCGAGGTGGCCCGCATCGCGCGCCTGCTGCTCGCCGACTCCTCGCGCCGCCTCGAGGGCGAGCGCCGCATCCGCTT
CGAGGCGGACGACGCCGCGGTGGAGCACCTGCTCGACCACGGCGGCTGGGACCCGGCGCTCGGCGCGCGTCCCATGCGCG
GCGCCATCCAGCGGCTGGTCGAGGCGCCGCTCGCCGAGCGGATCCTCTCCGGCGAGATCGTCGCCGGCGACACCGTGGCG
GTGACCGCCGCGGACGGCGCGCTCGCGTTCGCCCGCGCCTGA

Upstream 100 bases:

>100_bases
CGGGTCAATGGCAAAGTGCCGCGCTCCCCGCCGGGGCCCGCGTGGCCTGGAAGGGCCCGAAATTTGACCCGTTCGGGCCG
ATATCGCACTCTCCCCGGGA

Downstream 100 bases:

>100_bases
TCCGGCGCCACCTTGCCGCCGGCGGCGCGCGGCGGGACACTCCCCGCATGCCCTCCGCCTACGTCCTCGGCGCCGGCCGG
CTCGCCTCCGCGCTCGTCCC

Product: ATPase AAA-2 domain-containing protein

Products: NA

Alternate protein names: Exported protein 4 [H]

Number of amino acids: Translated: 813; Mature: 812

Protein sequence:

>813_residues
MATVIESMELLQVLAEAEDIARSVNQKLTSAHQLLAFFTVPNRAEVLLRDRGIDEDRILLAMTGAPREPEGVERDLRERA
RDVAEGVGAEEVDCLHLLIAMSRVRGAAAHQLLAACGLQLASLRNIALSYFTARMPRRLRQLQPVKVGPAAGATAPPAPR
RGADAPPADDLDDRLEDALGEAPALTPAPAATPAPAAPPLAAAEPRAAAAAAAPARRNGPHALDPKVFPWLSQLGRNLTE
LAAAGKLDPLVGREREVEEAIDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLLASAGQARERILVEIDMASVVAGTQLR
GAFSEKLLGIKEEVRKAGGRVVVFIDEVHTLMGAGAAGEGPQDAANELKAALARGEFPCIGATTHDEYRQHIEKDPALER
RFTPVLVREPSVADTVTILRGLAPRYEKHHQVAYAPEALEAAATLSARHVTDRFLPDKAVAVLDLAGSRAHRAGQRQVGE
REVAQVVAKMAGIPESRLLASDRERILGIEAALAARVVGHADAVARVAGVLKRNFAGFASRRPMGSFLLLGPTGVGKTEL
ARALADALYGSADALVQLDMTECAEQTGVARLVGAAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQIL
EEGRLTDGRGRLVDFSNTVVVLTSNLGAAEATRTSTGTLGFGAADRAAPREDRALAAARGAVPPELWNRLDERLVLAPLA
RGEVARIARLLLADSSRRLEGERRIRFEADDAAVEHLLDHGGWDPALGARPMRGAIQRLVEAPLAERILSGEIVAGDTVA
VTAADGALAFARA

Sequences:

>Translated_813_residues
MATVIESMELLQVLAEAEDIARSVNQKLTSAHQLLAFFTVPNRAEVLLRDRGIDEDRILLAMTGAPREPEGVERDLRERA
RDVAEGVGAEEVDCLHLLIAMSRVRGAAAHQLLAACGLQLASLRNIALSYFTARMPRRLRQLQPVKVGPAAGATAPPAPR
RGADAPPADDLDDRLEDALGEAPALTPAPAATPAPAAPPLAAAEPRAAAAAAAPARRNGPHALDPKVFPWLSQLGRNLTE
LAAAGKLDPLVGREREVEEAIDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLLASAGQARERILVEIDMASVVAGTQLR
GAFSEKLLGIKEEVRKAGGRVVVFIDEVHTLMGAGAAGEGPQDAANELKAALARGEFPCIGATTHDEYRQHIEKDPALER
RFTPVLVREPSVADTVTILRGLAPRYEKHHQVAYAPEALEAAATLSARHVTDRFLPDKAVAVLDLAGSRAHRAGQRQVGE
REVAQVVAKMAGIPESRLLASDRERILGIEAALAARVVGHADAVARVAGVLKRNFAGFASRRPMGSFLLLGPTGVGKTEL
ARALADALYGSADALVQLDMTECAEQTGVARLVGAAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQIL
EEGRLTDGRGRLVDFSNTVVVLTSNLGAAEATRTSTGTLGFGAADRAAPREDRALAAARGAVPPELWNRLDERLVLAPLA
RGEVARIARLLLADSSRRLEGERRIRFEADDAAVEHLLDHGGWDPALGARPMRGAIQRLVEAPLAERILSGEIVAGDTVA
VTAADGALAFARA
>Mature_812_residues
ATVIESMELLQVLAEAEDIARSVNQKLTSAHQLLAFFTVPNRAEVLLRDRGIDEDRILLAMTGAPREPEGVERDLRERAR
DVAEGVGAEEVDCLHLLIAMSRVRGAAAHQLLAACGLQLASLRNIALSYFTARMPRRLRQLQPVKVGPAAGATAPPAPRR
GADAPPADDLDDRLEDALGEAPALTPAPAATPAPAAPPLAAAEPRAAAAAAAPARRNGPHALDPKVFPWLSQLGRNLTEL
AAAGKLDPLVGREREVEEAIDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLLASAGQARERILVEIDMASVVAGTQLRG
AFSEKLLGIKEEVRKAGGRVVVFIDEVHTLMGAGAAGEGPQDAANELKAALARGEFPCIGATTHDEYRQHIEKDPALERR
FTPVLVREPSVADTVTILRGLAPRYEKHHQVAYAPEALEAAATLSARHVTDRFLPDKAVAVLDLAGSRAHRAGQRQVGER
EVAQVVAKMAGIPESRLLASDRERILGIEAALAARVVGHADAVARVAGVLKRNFAGFASRRPMGSFLLLGPTGVGKTELA
RALADALYGSADALVQLDMTECAEQTGVARLVGAAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQILE
EGRLTDGRGRLVDFSNTVVVLTSNLGAAEATRTSTGTLGFGAADRAAPREDRALAAARGAVPPELWNRLDERLVLAPLAR
GEVARIARLLLADSSRRLEGERRIRFEADDAAVEHLLDHGGWDPALGARPMRGAIQRLVEAPLAERILSGEIVAGDTVAV
TAADGALAFARA

Specific function: Could be necessary for degrading proteins generated by certain types of stress [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=319, Percent_Identity=28.5266457680251, Blast_Score=147, Evalue=5e-35,
Organism=Escherichia coli, GI1787109, Length=580, Percent_Identity=40.3448275862069, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1788943, Length=332, Percent_Identity=48.4939759036145, Blast_Score=298, Evalue=1e-81,
Organism=Saccharomyces cerevisiae, GI6320464, Length=238, Percent_Identity=53.3613445378151, Blast_Score=253, Evalue=7e-68,
Organism=Saccharomyces cerevisiae, GI6323002, Length=241, Percent_Identity=46.4730290456432, Blast_Score=214, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR001943 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small; PF02151 UVR [H]

EC number: NA

Molecular weight: Translated: 86162; Mature: 86030

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVIESMELLQVLAEAEDIARSVNQKLTSAHQLLAFFTVPNRAEVLLRDRGIDEDRILL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCEEE
AMTGAPREPEGVERDLRERARDVAEGVGAEEVDCLHLLIAMSRVRGAAAHQLLAACGLQL
EECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLRNIALSYFTARMPRRLRQLQPVKVGPAAGATAPPAPRRGADAPPADDLDDRLEDALG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
EAPALTPAPAATPAPAAPPLAAAEPRAAAAAAAPARRNGPHALDPKVFPWLSQLGRNLTE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH
LAAAGKLDPLVGREREVEEAIDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLLASAGQA
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHH
RERILVEIDMASVVAGTQLRGAFSEKLLGIKEEVRKAGGRVVVFIDEVHTLMGAGAAGEG
HCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCC
PQDAANELKAALARGEFPCIGATTHDEYRQHIEKDPALERRFTPVLVREPSVADTVTILR
HHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCCHHHCCCCEEEECCCHHHHHHHHH
GLAPRYEKHHQVAYAPEALEAAATLSARHVTDRFLPDKAVAVLDLAGSRAHRAGQRQVGE
HHCHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCH
REVAQVVAKMAGIPESRLLASDRERILGIEAALAARVVGHADAVARVAGVLKRNFAGFAS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPMGSFLLLGPTGVGKTELARALADALYGSADALVQLDMTECAEQTGVARLVGAAPGYV
CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHCHHHHHHCCCCCC
GYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQILEEGRLTDGRGRLVDFSNTVV
CCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEE
VLTSNLGAAEATRTSTGTLGFGAADRAAPREDRALAAARGAVPPELWNRLDERLVLAPLA
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEHHHCC
RGEVARIARLLLADSSRRLEGERRIRFEADDAAVEHLLDHGGWDPALGARPMRGAIQRLV
CCHHHHHHHHHHHCCHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
EAPLAERILSGEIVAGDTVAVTAADGALAFARA
HHHHHHHHHCCCEEECCEEEEEECCCCCHHCCC
>Mature Secondary Structure 
ATVIESMELLQVLAEAEDIARSVNQKLTSAHQLLAFFTVPNRAEVLLRDRGIDEDRILL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCEEE
AMTGAPREPEGVERDLRERARDVAEGVGAEEVDCLHLLIAMSRVRGAAAHQLLAACGLQL
EECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLRNIALSYFTARMPRRLRQLQPVKVGPAAGATAPPAPRRGADAPPADDLDDRLEDALG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
EAPALTPAPAATPAPAAPPLAAAEPRAAAAAAAPARRNGPHALDPKVFPWLSQLGRNLTE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH
LAAAGKLDPLVGREREVEEAIDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLLASAGQA
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHH
RERILVEIDMASVVAGTQLRGAFSEKLLGIKEEVRKAGGRVVVFIDEVHTLMGAGAAGEG
HCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCC
PQDAANELKAALARGEFPCIGATTHDEYRQHIEKDPALERRFTPVLVREPSVADTVTILR
HHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCCHHHCCCCEEEECCCHHHHHHHHH
GLAPRYEKHHQVAYAPEALEAAATLSARHVTDRFLPDKAVAVLDLAGSRAHRAGQRQVGE
HHCHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCH
REVAQVVAKMAGIPESRLLASDRERILGIEAALAARVVGHADAVARVAGVLKRNFAGFAS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPMGSFLLLGPTGVGKTELARALADALYGSADALVQLDMTECAEQTGVARLVGAAPGYV
CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHCHHHHHHCCCCCC
GYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQILEEGRLTDGRGRLVDFSNTVV
CCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEE
VLTSNLGAAEATRTSTGTLGFGAADRAAPREDRALAAARGAVPPELWNRLDERLVLAPLA
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEHHHCC
RGEVARIARLLLADSSRRLEGERRIRFEADDAAVEHLLDHGGWDPALGARPMRGAIQRLV
CCHHHHHHHHHHHCCHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
EAPLAERILSGEIVAGDTVAVTAADGALAFARA
HHHHHHHHHCCCEEECCEEEEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11463916; 7934910 [H]