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The map label for this gene is yibD [C]

Identifier: 220916603

GI number: 220916603

Start: 1674118

End: 1676814

Strand: Reverse

Name: yibD [C]

Synonym: A2cp1_1497

Alternate gene names: 220916603

Gene position: 1676814-1674118 (Counterclockwise)

Preceding gene: 220916615

Following gene: 220916587

Centisome position: 33.34

GC content: 77.75

Gene sequence:

>2697_bases
GTGCCCATCGCCCTCGAGCGCGAGCCCCGCGAGCCCCACACCCTCCCCGTTCCGGACGCCCCGGAGGCGGATCGCCTCCC
CGCCGAGCTCGCCGCCGCGCGCGCGGTGGCCGAGCGCGAGCGCCGGCGCGCCGAGGCGCTGGAGGATCGGCTCCGGGCGG
TCGAGGGCGCGCTCCGCGACGTCGAGGCGAGCCGCGCCTGGCGCGCGGCGCTCCTGTACTACCGCGTGCGCGACGCCCTG
CCGGCGGCGGCCTGGGCGCGCCGGGCGGCCCGCGCGCTGCGCCGGAGCGTGCGGGCGCGGCGCGGCGCGGGCGGGGCGGA
GCGGGCGCCGGCGCGGCTCCCGTCGGCGAGCGGCGCCGGGCCGCTCGCGGGGATGACGCTCGGGCACCGCGGCCGCGTCA
GCGTGGTCCTGCCGGTGTTCGACCAGGCCGACCTGCTGCCCGCCGCCATCGAGAGCGTGCTCGCCCAGACCCACCGCGAC
CTCGAGCTCATCGTGGTGAACGACGGCTCGCGCGACGGCGTCGAGCGCGTGCTGGACCGCTACGCCGACCATCCGCGGGT
GGTGGTGCTCACGCAGCCCAACCAGAAGCTCCCCTCGGCGCTGAACAGCGGCTTCGCCGTGGCCACCGGCGAGTGGTTCA
CCTGGACGTCCGCCGACAACCTGATGCTGCCGAACCAGCTCGAGGTGCTGCTGTCCCGGCTCCGCGCCCGGCCCGACCTC
GCCATGGTCTACTCGGACTACCAGGCCATCGACGGCGAGGGCCGCCCGCTCCGCGACCCCGCGTTCCGGCCGCAGGACCA
GGATCCGCGCGACCCGAGCCGCATGCGCCTGCCGCGCGAGGTCACCACCGAGAACCTGCTCCGGAGCGGCGACAACTTCA
TCGGCGCGAGCTTCCTGTACCGGCGCGACGCGGCCCGCCTGCTCGGACCGTACGCCGAGGACACGTTCGGCGGCGAGGAC
TACGACTACTGGCTGCGCATGCACGCGCTGTTCGGGATCGGGCACGTGGACGAGGTGCTCTACCGGTACCGCGTCCACGA
GAACAGCCTGAACGCCCGGGCGCGGGCGCTGCGCATCGCCGACGCGGTGGACCGGCTGCGCGCGCGCCACGAGGCGCGGC
TCGCGGCCCTGGCGGCGCCGCTGGCCTGGCGCTGCACCGGCGTGGCGGTCCCCGGCGTGCGGCTGGCCGGGCCCGGCGAG
CCGTGCGACGTCTCCGCCCACCTGCTCTCGCGCCGCGACGACCCCGCGGTCGAGGAGGCGGCGCGCCGGCCCGAGGCGCT
GCAGGTGTGCGTGGTGGACCGGCCGCTCGACGCGCTTGAGCGCGAGGTGCTCGCCCGGTACGACCTGCTCCTCACCCGCG
AGCCGGGCGCGCAGGCGCTCGCGAGCCGCTGGTTCCCGGAGCGCGCGTTCCTGCTCGACCCGGCCGCCGGCGCGCCGCTG
CTCGCGCGCGTGGCCGCCTACCGCCTGTTCGAGAAGCGCCGCGTCCCGGCGCCGCGGCAGCCGCCGGCGCGCGTCTACCC
CGTGGCCGCGCCGCTGCGCGTGGGCCTCCAGGCGGAGGGGCTCGACCGGGGCGGCCTGGAGCAGGTGGTGGCCGACCTGG
CGCTCAACCTGCCGCGCGAGCGGATTCGCGCCACGGTGCTGGTCCACGCGCGCGCGCCCGGCGCGATCGGCGCGCGCCTG
CGCGAGGCCGGGGTGGACCTGGTGATCACCGGCGGAGACGAGCGGCGGCTGGCGCGCGCGGCCGAGGAGCGGAAGCTCCA
GGTCATGAGCCTCCACTACAGCGTGGCCGGCGCGCGCGACCTGGGGCGGCGGGGCATCGCGAGCGCGTACACCGCGCACA
ACGCGTACGTGTGGATGGAGGGCGCGGAGCGCGCGCGCCGCGCGGCGGCGCTGCGCGCCATGGACCTGGTGGTGGCGGTC
TCCACGCCGGTCGAGCGCTACGTCGAGGAGGTGTTCGGGGTGGACGCGCGGCGGGTGCGGGTGATCCCGAACGGCCTCGA
CGTGCGCGGCCTGGAGGCGCCGCCCGCCTCGCGTGCCGCGCTCGGGATCGGCGCAGGGGACGTCGTCTTCGTGCAGGTGG
GACGCTTCGCGCGCGAGAAGCTGCAGGGCGTGACGGTCGAGGCGTTCCGCCGGATCGCGGGCGCGCTCCCCGGCGCGCAC
CTGGTGCTGGCGGGCGCGCCGGCCGACGCCGCCTACGCCGCCGAGGTGACCGCGGCGATCCGGCGGACGGGGCTGGAGGA
CCGGGTGCACCAGGTGCACCAGGCCGGGCGGACCGAGGTGGCGGGGCTGCTCCGGAGCTGCGACTGCCTGGTGCAGCCCT
CGTTGGTGGAGGGCTGGAGCGTGGCGGTGATGGAGGCGATGTACCACGGGCTGCCGCTCGTGCTCACCGACGTCGGCTCC
GCCCGGGAGGTGGTGCGCGGTGGAATCGGCCTGGTGCTGCCCAACCCCTACCCGCGCCTCGCCACGCTCGATCTCGCGGC
GCTCCGCGCGCTGGCCCGCAGCTACCCGGAGGCGAACCTCGCGGCGCTGGCCGAGGCCATGCGCGAGGTGGGCCTGCACC
GCGATGCGTGGCGGACGCGCGCGGCCGCGGGGCGCGCGCGGGTGCTCGGCGAGCTGGACGTCGCCAGCATGGCGCGCGCG
TACGCCGACGCGTTCGAGGACGCCTGGCGACGCGCCCGCAAGCCGGCGCAGGGCTGA

Upstream 100 bases:

>100_bases
CGTGGCAGGCCATCACCGGGGCTGTGGCGCGCCCCCTGCGGCGCGCGCCGCGGGGGCACCGGGCGCTGGCCGCGCGGGCG
CCCGCCCCCTAGCTTTCGAC

Downstream 100 bases:

>100_bases
CGGCTCAGCCGGCCCCGAGCGCCCGCAGGATCTGCTCCGCGCGCCCGGCCCAGGTGTTGGCGGCGACCGCCCGCTCGCGC
AGCGCGCGGTGCGCCGGGTC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 898; Mature: 897

Protein sequence:

>898_residues
MPIALEREPREPHTLPVPDAPEADRLPAELAAARAVAERERRRAEALEDRLRAVEGALRDVEASRAWRAALLYYRVRDAL
PAAAWARRAARALRRSVRARRGAGGAERAPARLPSASGAGPLAGMTLGHRGRVSVVLPVFDQADLLPAAIESVLAQTHRD
LELIVVNDGSRDGVERVLDRYADHPRVVVLTQPNQKLPSALNSGFAVATGEWFTWTSADNLMLPNQLEVLLSRLRARPDL
AMVYSDYQAIDGEGRPLRDPAFRPQDQDPRDPSRMRLPREVTTENLLRSGDNFIGASFLYRRDAARLLGPYAEDTFGGED
YDYWLRMHALFGIGHVDEVLYRYRVHENSLNARARALRIADAVDRLRARHEARLAALAAPLAWRCTGVAVPGVRLAGPGE
PCDVSAHLLSRRDDPAVEEAARRPEALQVCVVDRPLDALEREVLARYDLLLTREPGAQALASRWFPERAFLLDPAAGAPL
LARVAAYRLFEKRRVPAPRQPPARVYPVAAPLRVGLQAEGLDRGGLEQVVADLALNLPRERIRATVLVHARAPGAIGARL
REAGVDLVITGGDERRLARAAEERKLQVMSLHYSVAGARDLGRRGIASAYTAHNAYVWMEGAERARRAAALRAMDLVVAV
STPVERYVEEVFGVDARRVRVIPNGLDVRGLEAPPASRAALGIGAGDVVFVQVGRFAREKLQGVTVEAFRRIAGALPGAH
LVLAGAPADAAYAAEVTAAIRRTGLEDRVHQVHQAGRTEVAGLLRSCDCLVQPSLVEGWSVAVMEAMYHGLPLVLTDVGS
AREVVRGGIGLVLPNPYPRLATLDLAALRALARSYPEANLAALAEAMREVGLHRDAWRTRAAAGRARVLGELDVASMARA
YADAFEDAWRRARKPAQG

Sequences:

>Translated_898_residues
MPIALEREPREPHTLPVPDAPEADRLPAELAAARAVAERERRRAEALEDRLRAVEGALRDVEASRAWRAALLYYRVRDAL
PAAAWARRAARALRRSVRARRGAGGAERAPARLPSASGAGPLAGMTLGHRGRVSVVLPVFDQADLLPAAIESVLAQTHRD
LELIVVNDGSRDGVERVLDRYADHPRVVVLTQPNQKLPSALNSGFAVATGEWFTWTSADNLMLPNQLEVLLSRLRARPDL
AMVYSDYQAIDGEGRPLRDPAFRPQDQDPRDPSRMRLPREVTTENLLRSGDNFIGASFLYRRDAARLLGPYAEDTFGGED
YDYWLRMHALFGIGHVDEVLYRYRVHENSLNARARALRIADAVDRLRARHEARLAALAAPLAWRCTGVAVPGVRLAGPGE
PCDVSAHLLSRRDDPAVEEAARRPEALQVCVVDRPLDALEREVLARYDLLLTREPGAQALASRWFPERAFLLDPAAGAPL
LARVAAYRLFEKRRVPAPRQPPARVYPVAAPLRVGLQAEGLDRGGLEQVVADLALNLPRERIRATVLVHARAPGAIGARL
REAGVDLVITGGDERRLARAAEERKLQVMSLHYSVAGARDLGRRGIASAYTAHNAYVWMEGAERARRAAALRAMDLVVAV
STPVERYVEEVFGVDARRVRVIPNGLDVRGLEAPPASRAALGIGAGDVVFVQVGRFAREKLQGVTVEAFRRIAGALPGAH
LVLAGAPADAAYAAEVTAAIRRTGLEDRVHQVHQAGRTEVAGLLRSCDCLVQPSLVEGWSVAVMEAMYHGLPLVLTDVGS
AREVVRGGIGLVLPNPYPRLATLDLAALRALARSYPEANLAALAEAMREVGLHRDAWRTRAAAGRARVLGELDVASMARA
YADAFEDAWRRARKPAQG
>Mature_897_residues
PIALEREPREPHTLPVPDAPEADRLPAELAAARAVAERERRRAEALEDRLRAVEGALRDVEASRAWRAALLYYRVRDALP
AAAWARRAARALRRSVRARRGAGGAERAPARLPSASGAGPLAGMTLGHRGRVSVVLPVFDQADLLPAAIESVLAQTHRDL
ELIVVNDGSRDGVERVLDRYADHPRVVVLTQPNQKLPSALNSGFAVATGEWFTWTSADNLMLPNQLEVLLSRLRARPDLA
MVYSDYQAIDGEGRPLRDPAFRPQDQDPRDPSRMRLPREVTTENLLRSGDNFIGASFLYRRDAARLLGPYAEDTFGGEDY
DYWLRMHALFGIGHVDEVLYRYRVHENSLNARARALRIADAVDRLRARHEARLAALAAPLAWRCTGVAVPGVRLAGPGEP
CDVSAHLLSRRDDPAVEEAARRPEALQVCVVDRPLDALEREVLARYDLLLTREPGAQALASRWFPERAFLLDPAAGAPLL
ARVAAYRLFEKRRVPAPRQPPARVYPVAAPLRVGLQAEGLDRGGLEQVVADLALNLPRERIRATVLVHARAPGAIGARLR
EAGVDLVITGGDERRLARAAEERKLQVMSLHYSVAGARDLGRRGIASAYTAHNAYVWMEGAERARRAAALRAMDLVVAVS
TPVERYVEEVFGVDARRVRVIPNGLDVRGLEAPPASRAALGIGAGDVVFVQVGRFAREKLQGVTVEAFRRIAGALPGAHL
VLAGAPADAAYAAEVTAAIRRTGLEDRVHQVHQAGRTEVAGLLRSCDCLVQPSLVEGWSVAVMEAMYHGLPLVLTDVGSA
REVVRGGIGLVLPNPYPRLATLDLAALRALARSYPEANLAALAEAMREVGLHRDAWRTRAAAGRARVLGELDVASMARAY
ADAFEDAWRRARKPAQG

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=123, Percent_Identity=31.7073170731707, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 98004; Mature: 97873

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIALEREPREPHTLPVPDAPEADRLPAELAAARAVAERERRRAEALEDRLRAVEGALRD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEASRAWRAALLYYRVRDALPAAAWARRAARALRRSVRARRGAGGAERAPARLPSASGAG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PLAGMTLGHRGRVSVVLPVFDQADLLPAAIESVLAQTHRDLELIVVNDGSRDGVERVLDR
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
YADHPRVVVLTQPNQKLPSALNSGFAVATGEWFTWTSADNLMLPNQLEVLLSRLRARPDL
HCCCCEEEEEECCCHHHHHHHCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHCCCCE
AMVYSDYQAIDGEGRPLRDPAFRPQDQDPRDPSRMRLPREVTTENLLRSGDNFIGASFLY
EEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
RRDAARLLGPYAEDTFGGEDYDYWLRMHALFGIGHVDEVLYRYRVHENSLNARARALRIA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
DAVDRLRARHEARLAALAAPLAWRCTGVAVPGVRLAGPGEPCDVSAHLLSRRDDPAVEEA
HHHHHHHHHHHHHHHHHHCCHHHEECCEECCCEEECCCCCCCCHHHHHHCCCCCHHHHHH
ARRPEALQVCVVDRPLDALEREVLARYDLLLTREPGAQALASRWFPERAFLLDPAAGAPL
HCCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCEEEECCCCCCHH
LARVAAYRLFEKRRVPAPRQPPARVYPVAAPLRVGLQAEGLDRGGLEQVVADLALNLPRE
HHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHH
RIRATVLVHARAPGAIGARLREAGVDLVITGGDERRLARAAEERKLQVMSLHYSVAGARD
HHEEEEEEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCEEHEEEHHHHHCHHH
LGRRGIASAYTAHNAYVWMEGAERARRAAALRAMDLVVAVSTPVERYVEEVFGVDARRVR
HHHCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE
VIPNGLDVRGLEAPPASRAALGIGAGDVVFVQVGRFAREKLQGVTVEAFRRIAGALPGAH
ECCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
LVLAGAPADAAYAAEVTAAIRRTGLEDRVHQVHQAGRTEVAGLLRSCDCLVQPSLVEGWS
EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHCCHH
VAVMEAMYHGLPLVLTDVGSAREVVRGGIGLVLPNPYPRLATLDLAALRALARSYPEANL
HHHHHHHHCCCCEEEECCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH
AALAEAMREVGLHRDAWRTRAAAGRARVLGELDVASMARAYADAFEDAWRRARKPAQG
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PIALEREPREPHTLPVPDAPEADRLPAELAAARAVAERERRRAEALEDRLRAVEGALRD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEASRAWRAALLYYRVRDALPAAAWARRAARALRRSVRARRGAGGAERAPARLPSASGAG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PLAGMTLGHRGRVSVVLPVFDQADLLPAAIESVLAQTHRDLELIVVNDGSRDGVERVLDR
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
YADHPRVVVLTQPNQKLPSALNSGFAVATGEWFTWTSADNLMLPNQLEVLLSRLRARPDL
HCCCCEEEEEECCCHHHHHHHCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHCCCCE
AMVYSDYQAIDGEGRPLRDPAFRPQDQDPRDPSRMRLPREVTTENLLRSGDNFIGASFLY
EEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
RRDAARLLGPYAEDTFGGEDYDYWLRMHALFGIGHVDEVLYRYRVHENSLNARARALRIA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
DAVDRLRARHEARLAALAAPLAWRCTGVAVPGVRLAGPGEPCDVSAHLLSRRDDPAVEEA
HHHHHHHHHHHHHHHHHHCCHHHEECCEECCCEEECCCCCCCCHHHHHHCCCCCHHHHHH
ARRPEALQVCVVDRPLDALEREVLARYDLLLTREPGAQALASRWFPERAFLLDPAAGAPL
HCCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCEEEECCCCCCHH
LARVAAYRLFEKRRVPAPRQPPARVYPVAAPLRVGLQAEGLDRGGLEQVVADLALNLPRE
HHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHH
RIRATVLVHARAPGAIGARLREAGVDLVITGGDERRLARAAEERKLQVMSLHYSVAGARD
HHEEEEEEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCEEHEEEHHHHHCHHH
LGRRGIASAYTAHNAYVWMEGAERARRAAALRAMDLVVAVSTPVERYVEEVFGVDARRVR
HHHCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE
VIPNGLDVRGLEAPPASRAALGIGAGDVVFVQVGRFAREKLQGVTVEAFRRIAGALPGAH
ECCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
LVLAGAPADAAYAAEVTAAIRRTGLEDRVHQVHQAGRTEVAGLLRSCDCLVQPSLVEGWS
EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHCCHH
VAVMEAMYHGLPLVLTDVGSAREVVRGGIGLVLPNPYPRLATLDLAALRALARSYPEANL
HHHHHHHHCCCCEEEECCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH
AALAEAMREVGLHRDAWRTRAAAGRARVLGELDVASMARAYADAFEDAWRRARKPAQG
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA