Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916540
Identifier: 220916540
GI number: 220916540
Start: 1605253
End: 1606059
Strand: Reverse
Name: 220916540
Synonym: A2cp1_1434
Alternate gene names: NA
Gene position: 1606059-1605253 (Counterclockwise)
Preceding gene: 220916542
Following gene: 220916537
Centisome position: 31.93
GC content: 68.9
Gene sequence:
>807_bases GTGTCGAGCGATCTCCAGAGCTTCCTCGCCTTCCTGGAAGCGCAGAAGGCGAAGCAGGCCCCCCGTTTCCCATCGGTGAA GTTCGACAAGGTGCTGTCCTTCATGGGCACCACCAGCCTCGGCGGCACCTACAACGCGGTGTCGGTCAACCGCGTGCTCG GGATCGAGCCCGGTCCGACCGGCCGCGAGCTGCGCCTCCGCCTCGCCGGACCGCTGGCGCGCACGCCGGCCCGCGGCGAG TGCATCACCGTCCACCTGACGCGCGTCGAGCAGTACCAGGGCTTCCAGGTGAAGACCCGCGCGCTGTCGGTGAACTCGGT GGCGACCGACCTCCTGGAGGAGGACCGCGACGGCCTGGTGGTGAAGGGCGCGTCGATCTTCACCGTCCACCACAGCCCGT ACACGCTCAAGTTCTTCGAGAACGTGCCGTTCGAGGAGCTGGTGCAGATCGTGGGGAGCGTCCGCTACGCGCTGGTCGGC GTGGGCGAGACCGCGAACATCTCGCCGCGGTTCATCTTCCACCACGAGGTCCGCGACGGCCGCCTCACCCTGTTCCACGG CGACGGGCTCGCGCTGAAGACGTACATGAACCTCAAGTCGAACCGGCTCGAGACCCGGACCGTGATCGACCTCGACACCT ACCGCGGCTACGCGCTGCGCGGCACGGTGGAGGAGTTCGCGCCGCACCAGCACCCCGAGGCGTACGACCGGATCTGCCGC GGGTACACGGCGGGTGGATGGGGCAAGCCCTCGCGCGTCTTCCGCTCGGTCATCGACGACGTCGCGACGCTCGAGCCCGC CGGGTAG
Upstream 100 bases:
>100_bases GCAGCGAGGAAGCGAGCCGACGGTCCGTGATCAGGTGGACAACGGGGACCTCCATCCGTAATCTCCGCCTCCGGCAACAT CCTGCGCGAGGAGAGCATCC
Downstream 100 bases:
>100_bases CCGGACCGCCTCGATCCAGGCGACCGCCTCCGGCTCGCCCGCGCTCGCCCGGAGCGCGGCGTCGCCTCGGCGGCGCACCG TCGAGAGGAGGCGAGGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSSDLQSFLAFLEAQKAKQAPRFPSVKFDKVLSFMGTTSLGGTYNAVSVNRVLGIEPGPTGRELRLRLAGPLARTPARGE CITVHLTRVEQYQGFQVKTRALSVNSVATDLLEEDRDGLVVKGASIFTVHHSPYTLKFFENVPFEELVQIVGSVRYALVG VGETANISPRFIFHHEVRDGRLTLFHGDGLALKTYMNLKSNRLETRTVIDLDTYRGYALRGTVEEFAPHQHPEAYDRICR GYTAGGWGKPSRVFRSVIDDVATLEPAG
Sequences:
>Translated_268_residues MSSDLQSFLAFLEAQKAKQAPRFPSVKFDKVLSFMGTTSLGGTYNAVSVNRVLGIEPGPTGRELRLRLAGPLARTPARGE CITVHLTRVEQYQGFQVKTRALSVNSVATDLLEEDRDGLVVKGASIFTVHHSPYTLKFFENVPFEELVQIVGSVRYALVG VGETANISPRFIFHHEVRDGRLTLFHGDGLALKTYMNLKSNRLETRTVIDLDTYRGYALRGTVEEFAPHQHPEAYDRICR GYTAGGWGKPSRVFRSVIDDVATLEPAG >Mature_267_residues SSDLQSFLAFLEAQKAKQAPRFPSVKFDKVLSFMGTTSLGGTYNAVSVNRVLGIEPGPTGRELRLRLAGPLARTPARGEC ITVHLTRVEQYQGFQVKTRALSVNSVATDLLEEDRDGLVVKGASIFTVHHSPYTLKFFENVPFEELVQIVGSVRYALVGV GETANISPRFIFHHEVRDGRLTLFHGDGLALKTYMNLKSNRLETRTVIDLDTYRGYALRGTVEEFAPHQHPEAYDRICRG YTAGGWGKPSRVFRSVIDDVATLEPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29716; Mature: 29585
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDLQSFLAFLEAQKAKQAPRFPSVKFDKVLSFMGTTSLGGTYNAVSVNRVLGIEPGPT CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC GRELRLRLAGPLARTPARGECITVHLTRVEQYQGFQVKTRALSVNSVATDLLEEDRDGLV CCEEEEEEECCCCCCCCCCCEEEEEEEEHHHHCCCEEEEEEEEHHHHHHHHHHCCCCCEE VKGASIFTVHHSPYTLKFFENVPFEELVQIVGSVRYALVGVGETANISPRFIFHHEVRDG EECCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEECCCC RLTLFHGDGLALKTYMNLKSNRLETRTVIDLDTYRGYALRGTVEEFAPHQHPEAYDRICR EEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHC GYTAGGWGKPSRVFRSVIDDVATLEPAG CCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSDLQSFLAFLEAQKAKQAPRFPSVKFDKVLSFMGTTSLGGTYNAVSVNRVLGIEPGPT CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC GRELRLRLAGPLARTPARGECITVHLTRVEQYQGFQVKTRALSVNSVATDLLEEDRDGLV CCEEEEEEECCCCCCCCCCCEEEEEEEEHHHHCCCEEEEEEEEHHHHHHHHHHCCCCCEE VKGASIFTVHHSPYTLKFFENVPFEELVQIVGSVRYALVGVGETANISPRFIFHHEVRDG EECCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEECCCC RLTLFHGDGLALKTYMNLKSNRLETRTVIDLDTYRGYALRGTVEEFAPHQHPEAYDRICR EEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHC GYTAGGWGKPSRVFRSVIDDVATLEPAG CCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA