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The map label for this gene is yhdH [H]

Identifier: 220916522

GI number: 220916522

Start: 1583329

End: 1584339

Strand: Reverse

Name: yhdH [H]

Synonym: A2cp1_1416

Alternate gene names: 220916522

Gene position: 1584339-1583329 (Counterclockwise)

Preceding gene: 220916523

Following gene: 220916520

Centisome position: 31.5

GC content: 78.14

Gene sequence:

>1011_bases
ATGCCCGCGCCTTCGCTGCCGCAGCGCTTCCGTGCCTTCGTCGTCCGGGAGGGCGACGGCGCCCGCTCCGCCGGGTTCGA
GGAGCTGCCCGCCTCCGCGCTGCCCGAGGGCGAGCTGACGGTCGCGGTCCGCTACTCCAGCCTCAACTACAAGGACGCGC
TCGCGGTCACCGGCAAGGGCAAGGTGATCCGGAAGTTCCCCATGGTCCCGGGCATCGACCTCGCCGGCACGGTGCTCGAG
TCCCGCGATGCGTCGTTCCAGCCGGGCGACGAGGTGCTGGTGACGGGCTGGGGCATCGGCGAGGCCACGTTCGGCGGCTA
CGCCGGCCTGGCGCGCGTTCGCGCCGCGTGGGCCTTGCCGCTGCCGCGTGGCCTGACCGCCCGGCGCGCCATGGCCGTCG
GCACCGCCGGCTTCACCGCGGCGCTGTGCGTGGACGCGCTCGAGGACGCCGGCGTGCGCCCCGGCGGCCGGCCGGTGATC
GTCACCGGCGCGGCCGGCGGCGTGGGCAGCGTGGCCGTCGCGCTGCTGGCGCGCGCGGGCTACGAGGTCGCCGCCTCCAC
CGGCCGCCCCTCGGAGCGTGCCTTCCTGGAGTCCCTGGGCGCCACGCGCATCGTGCCGCGCGAGGAGCTGGCCCGGCCGG
GCACGCGGCCGCTCGAGTCGGAGACCTGGGCGGGCGGCGTGGACGCCGTGGGCGGCGCGGTGCTGGCGAGCGTGCTCCGC
CAGACCGCCTACCGCGGCGCGGTGGCCGCCTGCGGCCTGGCCGGCGGCACCGACCTGCCGGTCACGGTGCTCCCGTTCGT
GCTCCGCGGCGTGCGCCTCCAGGGCGTGGACTCGGTGATGGCGCCCGCGGCGCCGCGCGCGCGCGCCTGGGGCCGCATCG
CGCGCGACCTCACCGCCGACCGGATCGACGCGCTCACGACCGAGATCCCGCTCGCGGAGGTCCCTGCCTGGAGCGAGCGG
ATCCTGGCCGGGCAGGTGCGCGGGCGCGCGGTGGTCGCGGTCGCGCCGTGA

Upstream 100 bases:

>100_bases
GACCTCCCTGATCCGGGCACTGGACCCCTCCGGTGGGCTGGACGCAGGATGGCGGTCCCTCGCCTTCCATCGCCCTCCCC
TCGCCCCCGGAGATCCGCCC

Downstream 100 bases:

>100_bases
GGATCTGACGGGGCTGCGCCCCGCCCCCACCCTGCTCGCCGGGTCCCTTGCGCCGCCGCGGGCGGCTTCGCCGCGGACGC
GGCGGCGTCCCGGCGGGCTC

Product: quinone oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPAPSLPQRFRAFVVREGDGARSAGFEELPASALPEGELTVAVRYSSLNYKDALAVTGKGKVIRKFPMVPGIDLAGTVLE
SRDASFQPGDEVLVTGWGIGEATFGGYAGLARVRAAWALPLPRGLTARRAMAVGTAGFTAALCVDALEDAGVRPGGRPVI
VTGAAGGVGSVAVALLARAGYEVAASTGRPSERAFLESLGATRIVPREELARPGTRPLESETWAGGVDAVGGAVLASVLR
QTAYRGAVAACGLAGGTDLPVTVLPFVLRGVRLQGVDSVMAPAAPRARAWGRIARDLTADRIDALTTEIPLAEVPAWSER
ILAGQVRGRAVVAVAP

Sequences:

>Translated_336_residues
MPAPSLPQRFRAFVVREGDGARSAGFEELPASALPEGELTVAVRYSSLNYKDALAVTGKGKVIRKFPMVPGIDLAGTVLE
SRDASFQPGDEVLVTGWGIGEATFGGYAGLARVRAAWALPLPRGLTARRAMAVGTAGFTAALCVDALEDAGVRPGGRPVI
VTGAAGGVGSVAVALLARAGYEVAASTGRPSERAFLESLGATRIVPREELARPGTRPLESETWAGGVDAVGGAVLASVLR
QTAYRGAVAACGLAGGTDLPVTVLPFVLRGVRLQGVDSVMAPAAPRARAWGRIARDLTADRIDALTTEIPLAEVPAWSER
ILAGQVRGRAVVAVAP
>Mature_335_residues
PAPSLPQRFRAFVVREGDGARSAGFEELPASALPEGELTVAVRYSSLNYKDALAVTGKGKVIRKFPMVPGIDLAGTVLES
RDASFQPGDEVLVTGWGIGEATFGGYAGLARVRAAWALPLPRGLTARRAMAVGTAGFTAALCVDALEDAGVRPGGRPVIV
TGAAGGVGSVAVALLARAGYEVAASTGRPSERAFLESLGATRIVPREELARPGTRPLESETWAGGVDAVGGAVLASVLRQ
TAYRGAVAACGLAGGTDLPVTVLPFVLRGVRLQGVDSVMAPAAPRARAWGRIARDLTADRIDALTTEIPLAEVPAWSERI
LAGQVRGRAVVAVAP

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=56.3076923076923, Blast_Score=365, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI71988145, Length=356, Percent_Identity=24.7191011235955, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34550; Mature: 34419

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPSLPQRFRAFVVREGDGARSAGFEELPASALPEGELTVAVRYSSLNYKDALAVTGKG
CCCCCCCHHHHEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEECCCC
KVIRKFPMVPGIDLAGTVLESRDASFQPGDEVLVTGWGIGEATFGGYAGLARVRAAWALP
CEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC
LPRGLTARRAMAVGTAGFTAALCVDALEDAGVRPGGRPVIVTGAAGGVGSVAVALLARAG
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
YEVAASTGRPSERAFLESLGATRIVPREELARPGTRPLESETWAGGVDAVGGAVLASVLR
CCEEECCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QTAYRGAVAACGLAGGTDLPVTVLPFVLRGVRLQGVDSVMAPAAPRARAWGRIARDLTAD
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
RIDALTTEIPLAEVPAWSERILAGQVRGRAVVAVAP
HHHHHHHCCCHHHCCCHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure 
PAPSLPQRFRAFVVREGDGARSAGFEELPASALPEGELTVAVRYSSLNYKDALAVTGKG
CCCCCCHHHHEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEECCCC
KVIRKFPMVPGIDLAGTVLESRDASFQPGDEVLVTGWGIGEATFGGYAGLARVRAAWALP
CEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC
LPRGLTARRAMAVGTAGFTAALCVDALEDAGVRPGGRPVIVTGAAGGVGSVAVALLARAG
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
YEVAASTGRPSERAFLESLGATRIVPREELARPGTRPLESETWAGGVDAVGGAVLASVLR
CCEEECCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QTAYRGAVAACGLAGGTDLPVTVLPFVLRGVRLQGVDSVMAPAAPRARAWGRIARDLTAD
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
RIDALTTEIPLAEVPAWSERILAGQVRGRAVVAVAP
HHHHHHHCCCHHHCCCHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]