Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220916500
Identifier: 220916500
GI number: 220916500
Start: 1560528
End: 1561412
Strand: Reverse
Name: 220916500
Synonym: A2cp1_1394
Alternate gene names: NA
Gene position: 1561412-1560528 (Counterclockwise)
Preceding gene: 220916502
Following gene: 220916499
Centisome position: 31.05
GC content: 69.72
Gene sequence:
>885_bases ATGGCAGACGGCAAGCTGGACCGCGACTTCCTCCGCAGCGCGCTCGCGCTCATGTCGCGCACGGACGTGGACCGGCTCCT GTTCGTGTCCGACCACCCGCCCTCGCCGACCGAGATCCGCGGCCGTCCGACCAAGCGCAAGCTGGTCTACGCGGTCAGCA GCGAGGGCATCGCGAACCAGCTCAAGGCCAAGAAGGCGACGGCGGTGCTCATCCCGCCCTACGACTACACCCGCATCGAG AAGATCAAGGTGGCGGTGGTGGCGGCGCAGTCGGCCGGGCTGCTGAAGGACGGGGACACGGTGCTGGCCCTGTGCGGCCC CGGCGACGACCGGGTCATGGACACGCTCGTGAAGCTCGTGATCGGCTCGGAGGACCCGGAGGAGAAGATCCGGGTGGACA CGCTGGGCCTGCCGCCGGAGTTCTCGTCGCAGGTGGTGGAGAGCCTCATCCACACCGCCATGGAGATCGGCGCGGAGGGC TACGAGGGTCACGCGGTGGGCACCATCGTGGTGATCGGCGACTCGACCGCGGTGATGGAGAAGAGCCGGCAGCTCATCCT CAACCCGTTCCAGGGGATCAGCGAGGCGGAGCGGAACGCGCTCGACCCGCCCATCCGCGAGGCCATCAAGACGTTCTCGG CGCTCGACGGCGCCTTCATCATCCGCGAGGACGGGGTGGTGATGGCGGCCGGGCGGTACCTGCTCTCCATGTCGCGCGAC GTGAAGCTGCCCATGGGCCTGGGGGCGCGCCACAGCGCCGCGGCCTCGATCACCGCCGAGTCCAACGCCGTCGCCATCAC GGTGTCCCAGACCACCGGGACGGTGCGGGTGTTCCGCGAGGGCGAGATCGCCCTGGAGCTGCGGCAGAAGCTGCGGCGCG TGTGA
Upstream 100 bases:
>100_bases CGTCCGGCGCGGGCCTCCCGCGTCCGGCGGAGGCGGGCGCAGGCGCGCGGCGCGGGCGTACGATTTTGACTCGGGCACCG GCGCGGCGGATCCTCCGCGC
Downstream 100 bases:
>100_bases CGCCGGCCCGCGCCGCGGCGCTTCGCGCGCGGGGCGCTTCGCGGTACCCTCCGCCGCGTGCCGAGCCCCGCCGAGCCCGC TCCGTCGCCGCGCGCCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MADGKLDRDFLRSALALMSRTDVDRLLFVSDHPPSPTEIRGRPTKRKLVYAVSSEGIANQLKAKKATAVLIPPYDYTRIE KIKVAVVAAQSAGLLKDGDTVLALCGPGDDRVMDTLVKLVIGSEDPEEKIRVDTLGLPPEFSSQVVESLIHTAMEIGAEG YEGHAVGTIVVIGDSTAVMEKSRQLILNPFQGISEAERNALDPPIREAIKTFSALDGAFIIREDGVVMAAGRYLLSMSRD VKLPMGLGARHSAAASITAESNAVAITVSQTTGTVRVFREGEIALELRQKLRRV
Sequences:
>Translated_294_residues MADGKLDRDFLRSALALMSRTDVDRLLFVSDHPPSPTEIRGRPTKRKLVYAVSSEGIANQLKAKKATAVLIPPYDYTRIE KIKVAVVAAQSAGLLKDGDTVLALCGPGDDRVMDTLVKLVIGSEDPEEKIRVDTLGLPPEFSSQVVESLIHTAMEIGAEG YEGHAVGTIVVIGDSTAVMEKSRQLILNPFQGISEAERNALDPPIREAIKTFSALDGAFIIREDGVVMAAGRYLLSMSRD VKLPMGLGARHSAAASITAESNAVAITVSQTTGTVRVFREGEIALELRQKLRRV >Mature_293_residues ADGKLDRDFLRSALALMSRTDVDRLLFVSDHPPSPTEIRGRPTKRKLVYAVSSEGIANQLKAKKATAVLIPPYDYTRIEK IKVAVVAAQSAGLLKDGDTVLALCGPGDDRVMDTLVKLVIGSEDPEEKIRVDTLGLPPEFSSQVVESLIHTAMEIGAEGY EGHAVGTIVVIGDSTAVMEKSRQLILNPFQGISEAERNALDPPIREAIKTFSALDGAFIIREDGVVMAAGRYLLSMSRDV KLPMGLGARHSAAASITAESNAVAITVSQTTGTVRVFREGEIALELRQKLRRV
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003390 - InterPro: IPR015794 - InterPro: IPR015795 - InterPro: IPR014499 [H]
Pfam domain/function: PF02457 DisA_N; PF02887 PK_C [H]
EC number: NA
Molecular weight: Translated: 31705; Mature: 31574
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGKLDRDFLRSALALMSRTDVDRLLFVSDHPPSPTEIRGRPTKRKLVYAVSSEGIANQ CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHH LKAKKATAVLIPPYDYTRIEKIKVAVVAAQSAGLLKDGDTVLALCGPGDDRVMDTLVKLV HHHCCCCEEEECCCCCCHHEEEEEEEEEECCCCCEECCCEEEEEECCCCHHHHHHHHHHH IGSEDPEEKIRVDTLGLPPEFSSQVVESLIHTAMEIGAEGYEGHAVGTIVVIGDSTAVME HCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHH KSRQLILNPFQGISEAERNALDPPIREAIKTFSALDGAFIIREDGVVMAAGRYLLSMSRD HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCEEEECCHHHHHCCCC VKLPMGLGARHSAAASITAESNAVAITVSQTTGTVRVFREGEIALELRQKLRRV CCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure ADGKLDRDFLRSALALMSRTDVDRLLFVSDHPPSPTEIRGRPTKRKLVYAVSSEGIANQ CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHH LKAKKATAVLIPPYDYTRIEKIKVAVVAAQSAGLLKDGDTVLALCGPGDDRVMDTLVKLV HHHCCCCEEEECCCCCCHHEEEEEEEEEECCCCCEECCCEEEEEECCCCHHHHHHHHHHH IGSEDPEEKIRVDTLGLPPEFSSQVVESLIHTAMEIGAEGYEGHAVGTIVVIGDSTAVME HCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHH KSRQLILNPFQGISEAERNALDPPIREAIKTFSALDGAFIIREDGVVMAAGRYLLSMSRD HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCEEEECCHHHHHCCCC VKLPMGLGARHSAAASITAESNAVAITVSQTTGTVRVFREGEIALELRQKLRRV CCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]