Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916380
Identifier: 220916380
GI number: 220916380
Start: 1429380
End: 1430288
Strand: Reverse
Name: 220916380
Synonym: A2cp1_1274
Alternate gene names: NA
Gene position: 1430288-1429380 (Counterclockwise)
Preceding gene: 220916382
Following gene: 220916379
Centisome position: 28.44
GC content: 77.34
Gene sequence:
>909_bases GTGATCGCCCCCCTGCTCGCGCTCGCGCTCGGCACCTTCAGCATCGTCGCCGCCGATCCGGCCACCGGCCAGATCGGCGT GGCGGTGCAGTCCAAGTTCCCGGCGGTGGGCGCGCTCGTCCCCGCCGCGCGCGCCGGCGTCGGCGGCGTCGCGACGCAGG CGCTCGCCAACGAGGCGTGGCGCGCGGAGGCGCTGCGGCTGCTGGCCGCGGGCGTGCCCGCGGAGGAGGTGGTGAAGCGG CTCGTGGCGGCGGACCCGCAGGCCGCCGACCGGCAGATCGGGCTGGTGGACGCGAAGGGCGACGCGGCCGCGTACACCGG CGCGCGGTGCTTCGACCACGCCAGCCACGTCACCGGCCCGGGCTTCTCGGTGCAGGGGAACATCCTCGCCGGCCGCGCGG TCCCGGAGGCGATGGCCCGCGCCTACCAGGCGGCGCGCGACGCCGGCAAGCCGCTCGCCGAGCGCCTCCTCGCGGCGCTC GCGGCCGGGCAGGCGGCGGGCGGCGACCGGCGCGGCATGGAGAGCGCCGCGTTGCTGGTGGTGAAGCCGGGCGGCGGGTA CGGCGGCTCCGGCGACGTCTGGGTGGACCTGCGCGTGGACGACCATCCGCAGCCCATCGCCGAGCTCACCCGGCTCTACC GCGACGTGCACCAGTTCTACTTCGGCGAGACGGTCCGGGCGGTCCCGCTCGACGCGAAGGTGGCGCGCGAGGTGCGCGGC GCGCTGCTGCGGCTCGGCTTCCTGAAGGCGCCGGCCGCGCCGGGCGGCGGCGCGTGGGACGCGGCCAGCCAGCAGGCGCT GGAGGACTTCCAGGGCTGGGAGAACCTGGAGGGCCGCACCCGCAAGGACGGCACCATCGACGAGGTGGTGCTCGCGCACC TGCGCAAGGTGGCCGCCCGAAAGCGCTGA
Upstream 100 bases:
>100_bases GCGCCCTGTCGAGGATCCTCGCCACGTTCCCTCCCGCCCGGCGTCCCGAGGAGCGCTACCTTCGGCCCCGCCGGGCGGCG CGTCAACCCTGGAGGTCACG
Downstream 100 bases:
>100_bases TCCGGCGGGGCGTTGAAGATCCGCCGGGCCCGGCGCGTCGCTCCGAGGCGGGACCCTCGACGTGGCCGACGTGCCCGGGC GTGGAATCGCTTCCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Pilin Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MIAPLLALALGTFSIVAADPATGQIGVAVQSKFPAVGALVPAARAGVGGVATQALANEAWRAEALRLLAAGVPAEEVVKR LVAADPQAADRQIGLVDAKGDAAAYTGARCFDHASHVTGPGFSVQGNILAGRAVPEAMARAYQAARDAGKPLAERLLAAL AAGQAAGGDRRGMESAALLVVKPGGGYGGSGDVWVDLRVDDHPQPIAELTRLYRDVHQFYFGETVRAVPLDAKVAREVRG ALLRLGFLKAPAAPGGGAWDAASQQALEDFQGWENLEGRTRKDGTIDEVVLAHLRKVAARKR
Sequences:
>Translated_302_residues MIAPLLALALGTFSIVAADPATGQIGVAVQSKFPAVGALVPAARAGVGGVATQALANEAWRAEALRLLAAGVPAEEVVKR LVAADPQAADRQIGLVDAKGDAAAYTGARCFDHASHVTGPGFSVQGNILAGRAVPEAMARAYQAARDAGKPLAERLLAAL AAGQAAGGDRRGMESAALLVVKPGGGYGGSGDVWVDLRVDDHPQPIAELTRLYRDVHQFYFGETVRAVPLDAKVAREVRG ALLRLGFLKAPAAPGGGAWDAASQQALEDFQGWENLEGRTRKDGTIDEVVLAHLRKVAARKR >Mature_302_residues MIAPLLALALGTFSIVAADPATGQIGVAVQSKFPAVGALVPAARAGVGGVATQALANEAWRAEALRLLAAGVPAEEVVKR LVAADPQAADRQIGLVDAKGDAAAYTGARCFDHASHVTGPGFSVQGNILAGRAVPEAMARAYQAARDAGKPLAERLLAAL AAGQAAGGDRRGMESAALLVVKPGGGYGGSGDVWVDLRVDDHPQPIAELTRLYRDVHQFYFGETVRAVPLDAKVAREVRG ALLRLGFLKAPAAPGGGAWDAASQQALEDFQGWENLEGRTRKDGTIDEVVLAHLRKVAARKR
Specific function: Unknown
COG id: COG3342
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31270; Mature: 31270
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPLLALALGTFSIVAADPATGQIGVAVQSKFPAVGALVPAARAGVGGVATQALANEAW CCHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH RAEALRLLAAGVPAEEVVKRLVAADPQAADRQIGLVDAKGDAAAYTGARCFDHASHVTGP HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC GFSVQGNILAGRAVPEAMARAYQAARDAGKPLAERLLAALAAGQAAGGDRRGMESAALLV CCEEECCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VKPGGGYGGSGDVWVDLRVDDHPQPIAELTRLYRDVHQFYFGETVRAVPLDAKVAREVRG EECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH ALLRLGFLKAPAAPGGGAWDAASQQALEDFQGWENLEGRTRKDGTIDEVVLAHLRKVAAR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC KR CC >Mature Secondary Structure MIAPLLALALGTFSIVAADPATGQIGVAVQSKFPAVGALVPAARAGVGGVATQALANEAW CCHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH RAEALRLLAAGVPAEEVVKRLVAADPQAADRQIGLVDAKGDAAAYTGARCFDHASHVTGP HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC GFSVQGNILAGRAVPEAMARAYQAARDAGKPLAERLLAALAAGQAAGGDRRGMESAALLV CCEEECCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VKPGGGYGGSGDVWVDLRVDDHPQPIAELTRLYRDVHQFYFGETVRAVPLDAKVAREVRG EECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH ALLRLGFLKAPAAPGGGAWDAASQQALEDFQGWENLEGRTRKDGTIDEVVLAHLRKVAAR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC KR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA