Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is purC [H]
Identifier: 220916346
GI number: 220916346
Start: 1392130
End: 1393089
Strand: Reverse
Name: purC [H]
Synonym: A2cp1_1240
Alternate gene names: 220916346
Gene position: 1393089-1392130 (Counterclockwise)
Preceding gene: 220916348
Following gene: 220916345
Centisome position: 27.7
GC content: 68.65
Gene sequence:
>960_bases ATGATCCCCGACGACAAGCTGCGGGCCCAGCTCCCGCACACCCTCCAGCAGCTCGACCTCCCCGGTCTCGGCGAGCTGTA CCGGGGGAAGGTCCGCGACAACTACAGCCGCGGCGACCGGATCGTCATGGTCACGACCGACCGGATCTCGGCCTTCGACC ACGTGCTCGGCACCATCCCGTTCAAGGGCGAGGTGCTGTCGCGGCTCACCGCGTTCTGGTTCGACAAGGTGAAGGACATC GCGCCGACGCACATCGTCGAGGTGCCGGATCCGAGCGTGATGGTGGTGAAGCGCGCCAAGGCGCTGCCCATCGAGATCGT CATCCGCGGCTACGTCACCGGCTCGCTCTGGCGCGACTACCAGGCCGGCAAGGCCGACTACGGCATCTCCTGGCCGGCCG GGCTGCGCAAGGACCAGCGGTTCGACCAGCCCATCATCACGCCCTCGACCAAGGCCGAGTACGGCAAGCACGACGAGCCC ATCGGCGAGGCCGAGATCCTGAAGCAGGGTCTGGTGACGCCGGACGTCTGGAAGGAGGCCACCGCCGTCGCGCGGCGGCT GTTCCAGCGCGGCCAGGAGTGGGCGCGGACGCGCGGCCTCATCCTCGTGGACACGAAGTACGAGATGGGGATCGCCGACG GCAAGCTGGTGGTCATCGACGAGATCCACACCCCGGACAGCTCGCGCTACTGGGTGGCGGACGGCTACGAGGAGCGCTTC GCGCGGGGCGAGGACCAGGAGATGCTGGACAAGGAGAACATCCGGCAGTGGCTCATCAAGGAGCACGGGTTCTCCGGGCA CGGCACCCCGCCCCCGCTCACCGACGACGTGCGGGTGATGCTGGCGCGCAAGTACGTCGAGGTCTTCGAGAAGCTCACCG GCGAGACGTTCGCGTCGGAGGTCGGCTCGGTCGCCGCCCGCATCGAGCGGAACCTCCGCGCCACGGGTCACCTCGCCTGA
Upstream 100 bases:
>100_bases CGGGCGGCGGCGCCGACGTTGTCGGCGCTCTGCGGCCGGTGGAGCACGAGGCGGATTTTTCCCGGGTGCATGTGCGCCCG CCACGTATAACATCCCGCCC
Downstream 100 bases:
>100_bases GCCTCGCCGGGGCCGGCGGCCGCTCCCCGGCCGGCCGCCCCGCAGCGGAGTGGCGCCGGGCCCGCGCCCGCGCGCCGGGA GGCGCTCCGCCGCCCGCCCC
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIPDDKLRAQLPHTLQQLDLPGLGELYRGKVRDNYSRGDRIVMVTTDRISAFDHVLGTIPFKGEVLSRLTAFWFDKVKDI APTHIVEVPDPSVMVVKRAKALPIEIVIRGYVTGSLWRDYQAGKADYGISWPAGLRKDQRFDQPIITPSTKAEYGKHDEP IGEAEILKQGLVTPDVWKEATAVARRLFQRGQEWARTRGLILVDTKYEMGIADGKLVVIDEIHTPDSSRYWVADGYEERF ARGEDQEMLDKENIRQWLIKEHGFSGHGTPPPLTDDVRVMLARKYVEVFEKLTGETFASEVGSVAARIERNLRATGHLA
Sequences:
>Translated_319_residues MIPDDKLRAQLPHTLQQLDLPGLGELYRGKVRDNYSRGDRIVMVTTDRISAFDHVLGTIPFKGEVLSRLTAFWFDKVKDI APTHIVEVPDPSVMVVKRAKALPIEIVIRGYVTGSLWRDYQAGKADYGISWPAGLRKDQRFDQPIITPSTKAEYGKHDEP IGEAEILKQGLVTPDVWKEATAVARRLFQRGQEWARTRGLILVDTKYEMGIADGKLVVIDEIHTPDSSRYWVADGYEERF ARGEDQEMLDKENIRQWLIKEHGFSGHGTPPPLTDDVRVMLARKYVEVFEKLTGETFASEVGSVAARIERNLRATGHLA >Mature_319_residues MIPDDKLRAQLPHTLQQLDLPGLGELYRGKVRDNYSRGDRIVMVTTDRISAFDHVLGTIPFKGEVLSRLTAFWFDKVKDI APTHIVEVPDPSVMVVKRAKALPIEIVIRGYVTGSLWRDYQAGKADYGISWPAGLRKDQRFDQPIITPSTKAEYGKHDEP IGEAEILKQGLVTPDVWKEATAVARRLFQRGQEWARTRGLILVDTKYEMGIADGKLVVIDEIHTPDSSRYWVADGYEERF ARGEDQEMLDKENIRQWLIKEHGFSGHGTPPPLTDDVRVMLARKYVEVFEKLTGETFASEVGSVAARIERNLRATGHLA
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=299, Percent_Identity=35.1170568561873, Blast_Score=185, Evalue=8e-48,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 36107; Mature: 36107
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS01057 SAICAR_SYNTHETASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDDKLRAQLPHTLQQLDLPGLGELYRGKVRDNYSRGDRIVMVTTDRISAFDHVLGTIP CCCCHHHHHHHHHHHHHCCCCCCHHHHHCHHCCCCCCCCEEEEEECCHHHHHHHHHHCCC FKGEVLSRLTAFWFDKVKDIAPTHIVEVPDPSVMVVKRAKALPIEIVIRGYVTGSLWRDY CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHCCCCCEEEEEEHHHHHHHHHHH QAGKADYGISWPAGLRKDQRFDQPIITPSTKAEYGKHDEPIGEAEILKQGLVTPDVWKEA CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH TAVARRLFQRGQEWARTRGLILVDTKYEMGIADGKLVVIDEIHTPDSSRYWVADGYEERF HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHH ARGEDQEMLDKENIRQWLIKEHGFSGHGTPPPLTDDVRVMLARKYVEVFEKLTGETFASE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH VGSVAARIERNLRATGHLA HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIPDDKLRAQLPHTLQQLDLPGLGELYRGKVRDNYSRGDRIVMVTTDRISAFDHVLGTIP CCCCHHHHHHHHHHHHHCCCCCCHHHHHCHHCCCCCCCCEEEEEECCHHHHHHHHHHCCC FKGEVLSRLTAFWFDKVKDIAPTHIVEVPDPSVMVVKRAKALPIEIVIRGYVTGSLWRDY CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHCCCCCEEEEEEHHHHHHHHHHH QAGKADYGISWPAGLRKDQRFDQPIITPSTKAEYGKHDEPIGEAEILKQGLVTPDVWKEA CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH TAVARRLFQRGQEWARTRGLILVDTKYEMGIADGKLVVIDEIHTPDSSRYWVADGYEERF HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHH ARGEDQEMLDKENIRQWLIKEHGFSGHGTPPPLTDDVRVMLARKYVEVFEKLTGETFASE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH VGSVAARIERNLRATGHLA HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA