Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916325
Identifier: 220916325
GI number: 220916325
Start: 1368519
End: 1370396
Strand: Reverse
Name: 220916325
Synonym: A2cp1_1219
Alternate gene names: NA
Gene position: 1370396-1368519 (Counterclockwise)
Preceding gene: 220916345
Following gene: 220916309
Centisome position: 27.25
GC content: 78.12
Gene sequence:
>1878_bases GTGCCACGCATCCTGGTCGCCGAGGGACACCCGGCCACGCGCGAGTTCGTCGCCCGGAGCCTCGCCGACGCCGGCCTGGA GGCGATCGCCCCCGAGGACCCTCAGCAGGTGTTCGAGCTGTACGCGGCGCAGCGCCCCGACGCGGTGGTGCTCGCGGCCG ACCTCGCCGCCGGGCCGGCCGGCCCGCTCGCGCAGCGGCTCCGCGGCGCCGATCCCCGCGCGCTCCTGGTGGTCGCCGAC AAGGAGCACCTGGGCAAGGCGCGCGGGCTCGCCGCGGTGCTCCCGCTGAAGCCGAACGCGTACGTGGCCGACCCCACCCG CCGCGAGCTGGTGGACAAGGTGCAGCAGCTCGTGGCGCAGGCCGCGGCGGCGGCGCGCGCCCGGCTGCGAGGCTCGGCGC TGGTGCTGTCGCGGGCGCCGGCAGCGCTCGGCGAGGTGCGGCCCGGCGTGGTGGCGCGGCTGCTGCACCAGATCTGGCGC TCGGCGGCCGAGGGGGTGCTGGTGCTGGAGGAGCCGGCCGGGCCGGCGCGGCGCATGTTCTTCCAGCGCGGCGCGCCGGT GGCGCTCCAGTCCGACGATCCCGCCGACGCGCTGGTGCGCTGGCTGCGCGACGCCGGGCGGCTCGACGCCGCGGCGCAGC GCGCCGCGGTGGAGGGGATGGCGAGCGGCCTCAGCCCCGGCGCCGCGCTGGTGGCGGCGGGCGTGCTCGAGCCCGGCGAG CCGCTCTCGGCGGCGCTGCGCGCGCACCTCGAGGCGCTGGTGGCGCGGGCCGTCGGCGCGCGCGAGGGCCGGTGGCGCTT CCACCCGGGCGGCGAGTTCGCGGGGGAGATCCACGCCACGCCCGTGCTCCCGCTGCGCGCCATCCTCGAGGGCGCCCGCA GCGGCATCCCGGCGCGGCACTTCTCCGAGGCGCTGCGCGCCGTCACCGACGCCTACCCGGTCCGCACCGGCGACTTCCAG CAGATCCTCCCCGCCGCCGGCCTCTCCAGCGCCGACCTGCGACTGGCGGTCTCCCTCGACGGCCGGACCCGCATGCGCGA CTGGCTCGAAGCCCGGCGCACCGAGCTGCGCGACGCGCTGACGCTGCTGTGGTTCCTGTCGATGGTCGGCGCGGTGGCGT TCCACGAGGCGCCCGAGGCCGGCGACGCCGTGTACGGCAAGGTGCCCGCCCCGCCCCGTCGCCGCCCCCTCCCCGCCGAC CGCGCCGAGGCGGTGCGCCAGGCCGCGCTGCAGATCCTGCCCGGCAGCTACTTCCGCGCGCTCGGGGTCGACATCTCGGC CGGGCCGCCGGAGATCGAGGCCGCCTACCGCGAGGTCGCCGGACGCTTCCACCCCGACGCGTTCGCGCAGTTCGAGGTCG GCGACCTCGAGGACCTGCTCGCGGCGGTGCAGGACAAGGTGACCGCCGCGTACAAGGTGCTGTCCACGCCGGAGAAGCGC GAGGCGTACCTCTCGTTCCTGATGCTGCGCTACGAGCTGTCCGGCGTTCGCCGCCCCGGGATCGACGTGGCGGCCGAGAT CGCGCTGAAGCGCGGCGAGCGCGCGCTGCGGGCGAGGCGCATCTCCGACGCGCTGGCCGCGTTCCGCGAGGCGGTGGAGC GCAACCCGCGCGAGCCCGAGTACCTCGCCATGCTCGGGTTCGCCGCGCTGCACGACCCCGCGCTCCCGCCCGGCGAGCGC GCCCAGGAGGCCCGCCGGCAGGCGAGGAAGGCGCTCTCGCTCGCCCCCGACGGCGGCCGCGCCGCCGCCGTGCTGGCGCT CGCCGAGGCCGCGCTGGGCGAGGTGGCCGAGGCGCGCCGCGTGACGCTGGCGGCGCTGAAGGCGCAGCCGGACCGGGAGC TGCTGAAGCAGGTGCTGCACCGGCTGAACGCGGCGTGA
Upstream 100 bases:
>100_bases TCATGGCGCGGGGCCGTGGAGTCTAGCATTCCCGCGCGTCGGCCCGCGCGGTGCGGCCGGGGATCTTCGTCTCGCCGGGG AAGGCACGTACAATCGGCGC
Downstream 100 bases:
>100_bases GGGATCGAGGTCCGCGGGCTGGCGCCGGAGGTCCGCTCAGCGCCCCACGTCCCACCCTCGGGCATCTCGTGAGCCGATCC CCGCGGCCGGGCACCCGTCC
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MPRILVAEGHPATREFVARSLADAGLEAIAPEDPQQVFELYAAQRPDAVVLAADLAAGPAGPLAQRLRGADPRALLVVAD KEHLGKARGLAAVLPLKPNAYVADPTRRELVDKVQQLVAQAAAAARARLRGSALVLSRAPAALGEVRPGVVARLLHQIWR SAAEGVLVLEEPAGPARRMFFQRGAPVALQSDDPADALVRWLRDAGRLDAAAQRAAVEGMASGLSPGAALVAAGVLEPGE PLSAALRAHLEALVARAVGAREGRWRFHPGGEFAGEIHATPVLPLRAILEGARSGIPARHFSEALRAVTDAYPVRTGDFQ QILPAAGLSSADLRLAVSLDGRTRMRDWLEARRTELRDALTLLWFLSMVGAVAFHEAPEAGDAVYGKVPAPPRRRPLPAD RAEAVRQAALQILPGSYFRALGVDISAGPPEIEAAYREVAGRFHPDAFAQFEVGDLEDLLAAVQDKVTAAYKVLSTPEKR EAYLSFLMLRYELSGVRRPGIDVAAEIALKRGERALRARRISDALAAFREAVERNPREPEYLAMLGFAALHDPALPPGER AQEARRQARKALSLAPDGGRAAAVLALAEAALGEVAEARRVTLAALKAQPDRELLKQVLHRLNAA
Sequences:
>Translated_625_residues MPRILVAEGHPATREFVARSLADAGLEAIAPEDPQQVFELYAAQRPDAVVLAADLAAGPAGPLAQRLRGADPRALLVVAD KEHLGKARGLAAVLPLKPNAYVADPTRRELVDKVQQLVAQAAAAARARLRGSALVLSRAPAALGEVRPGVVARLLHQIWR SAAEGVLVLEEPAGPARRMFFQRGAPVALQSDDPADALVRWLRDAGRLDAAAQRAAVEGMASGLSPGAALVAAGVLEPGE PLSAALRAHLEALVARAVGAREGRWRFHPGGEFAGEIHATPVLPLRAILEGARSGIPARHFSEALRAVTDAYPVRTGDFQ QILPAAGLSSADLRLAVSLDGRTRMRDWLEARRTELRDALTLLWFLSMVGAVAFHEAPEAGDAVYGKVPAPPRRRPLPAD RAEAVRQAALQILPGSYFRALGVDISAGPPEIEAAYREVAGRFHPDAFAQFEVGDLEDLLAAVQDKVTAAYKVLSTPEKR EAYLSFLMLRYELSGVRRPGIDVAAEIALKRGERALRARRISDALAAFREAVERNPREPEYLAMLGFAALHDPALPPGER AQEARRQARKALSLAPDGGRAAAVLALAEAALGEVAEARRVTLAALKAQPDRELLKQVLHRLNAA >Mature_624_residues PRILVAEGHPATREFVARSLADAGLEAIAPEDPQQVFELYAAQRPDAVVLAADLAAGPAGPLAQRLRGADPRALLVVADK EHLGKARGLAAVLPLKPNAYVADPTRRELVDKVQQLVAQAAAAARARLRGSALVLSRAPAALGEVRPGVVARLLHQIWRS AAEGVLVLEEPAGPARRMFFQRGAPVALQSDDPADALVRWLRDAGRLDAAAQRAAVEGMASGLSPGAALVAAGVLEPGEP LSAALRAHLEALVARAVGAREGRWRFHPGGEFAGEIHATPVLPLRAILEGARSGIPARHFSEALRAVTDAYPVRTGDFQQ ILPAAGLSSADLRLAVSLDGRTRMRDWLEARRTELRDALTLLWFLSMVGAVAFHEAPEAGDAVYGKVPAPPRRRPLPADR AEAVRQAALQILPGSYFRALGVDISAGPPEIEAAYREVAGRFHPDAFAQFEVGDLEDLLAAVQDKVTAAYKVLSTPEKRE AYLSFLMLRYELSGVRRPGIDVAAEIALKRGERALRARRISDALAAFREAVERNPREPEYLAMLGFAALHDPALPPGERA QEARRQARKALSLAPDGGRAAAVLALAEAALGEVAEARRVTLAALKAQPDRELLKQVLHRLNAA
Specific function: Unknown
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66765; Mature: 66634
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILVAEGHPATREFVARSLADAGLEAIAPEDPQQVFELYAAQRPDAVVLAADLAAGPA CCCEEEECCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCC GPLAQRLRGADPRALLVVADKEHLGKARGLAAVLPLKPNAYVADPTRRELVDKVQQLVAQ CHHHHHHCCCCCCEEEEEECHHHHHHHCCCEEEEECCCCCEECCCHHHHHHHHHHHHHHH AAAAARARLRGSALVLSRAPAALGEVRPGVVARLLHQIWRSAAEGVLVLEEPAGPARRMF HHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH FQRGAPVALQSDDPADALVRWLRDAGRLDAAAQRAAVEGMASGLSPGAALVAAGVLEPGE HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC PLSAALRAHLEALVARAVGAREGRWRFHPGGEFAGEIHATPVLPLRAILEGARSGIPARH HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH FSEALRAVTDAYPVRTGDFQQILPAAGLSSADLRLAVSLDGRTRMRDWLEARRTELRDAL HHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH TLLWFLSMVGAVAFHEAPEAGDAVYGKVPAPPRRRPLPADRAEAVRQAALQILPGSYFRA HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH LGVDISAGPPEIEAAYREVAGRFHPDAFAQFEVGDLEDLLAAVQDKVTAAYKVLSTPEKR HCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH EAYLSFLMLRYELSGVRRPGIDVAAEIALKRGERALRARRISDALAAFREAVERNPREPE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YLAMLGFAALHDPALPPGERAQEARRQARKALSLAPDGGRAAAVLALAEAALGEVAEARR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VTLAALKAQPDRELLKQVLHRLNAA HHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PRILVAEGHPATREFVARSLADAGLEAIAPEDPQQVFELYAAQRPDAVVLAADLAAGPA CCEEEECCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCC GPLAQRLRGADPRALLVVADKEHLGKARGLAAVLPLKPNAYVADPTRRELVDKVQQLVAQ CHHHHHHCCCCCCEEEEEECHHHHHHHCCCEEEEECCCCCEECCCHHHHHHHHHHHHHHH AAAAARARLRGSALVLSRAPAALGEVRPGVVARLLHQIWRSAAEGVLVLEEPAGPARRMF HHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH FQRGAPVALQSDDPADALVRWLRDAGRLDAAAQRAAVEGMASGLSPGAALVAAGVLEPGE HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC PLSAALRAHLEALVARAVGAREGRWRFHPGGEFAGEIHATPVLPLRAILEGARSGIPARH HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH FSEALRAVTDAYPVRTGDFQQILPAAGLSSADLRLAVSLDGRTRMRDWLEARRTELRDAL HHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH TLLWFLSMVGAVAFHEAPEAGDAVYGKVPAPPRRRPLPADRAEAVRQAALQILPGSYFRA HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH LGVDISAGPPEIEAAYREVAGRFHPDAFAQFEVGDLEDLLAAVQDKVTAAYKVLSTPEKR HCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH EAYLSFLMLRYELSGVRRPGIDVAAEIALKRGERALRARRISDALAAFREAVERNPREPE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YLAMLGFAALHDPALPPGERAQEARRQARKALSLAPDGGRAAAVLALAEAALGEVAEARR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VTLAALKAQPDRELLKQVLHRLNAA HHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA