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The map label for this gene is yaeT [C]

Identifier: 220916308

GI number: 220916308

Start: 1346203

End: 1347621

Strand: Reverse

Name: yaeT [C]

Synonym: A2cp1_1201

Alternate gene names: 220916308

Gene position: 1347621-1346203 (Counterclockwise)

Preceding gene: 220916309

Following gene: 220916307

Centisome position: 26.8

GC content: 75.76

Gene sequence:

>1419_bases
ATGCCCGCGCTCCCCACGCTCTGCGCGCTCGCGCTGCTGGCCGCCGCCCCCGGCGCCTCGCCGGTGCCCGCCCCGGCGGT
GCCCGCCCCCGCCCCCGCGCCGGCCGGCGGCCCCGAGGCCGGCCCGCTCGGCCGCCGCTATCACCTGGAGCGCATCGAGC
TGCGCGGCCTCACGCACACGCGCGAGGCCGAGGTGCGGCGCCACCTGCTCGTGGCGCCCGGGGACGTGCTCGACACCGAG
CGGGTGCTCCTGTCCCGCCTGCGCCTCCTGCAGCTCGGCTGGTTCTCGCGGGTGGAGACCCGGGTCGAGCGCGGCTCGGA
GCGCGGCCTGGTGGTGCTCGTCATCGAGGTCACCGAGCGCAACACGCTCATCGTGAGCGATCTCGTGTTCGGCTCGACCG
GCCCGCAGCCGTTCTACGGCGGCCTCGGGCTGTCGCAGCAGAACTTCCTCGGCCGTGGCATGGGGCTCTCCGGCGCGTTC
GTGTACGGCGGGTCCCCGTCGGGCCGGTCCGACGACCCGTCCCGCTTCGCGCTGCGCGGCGGCTTCTTCGCGCCCGACCT
CACGCCGCGGCGGCTGCCGCCGCTCGTGTTCGGCGTCTCCGGCCAGTTCCTGCGCGGCGAGGAGCTGACCTGCGACGACC
CGGGCTGCGAGGCGTACCGCTCCGACTACGGGCGCGCCCCGCGCATCCGGTACCAGCGCGCGGCGGGCGAGGTGACGCTG
GGGATGCGGCCGGGCCCGTTCGAGCGGCTCCTCGCGACCTACCGCTACGAGCGCCTGCACGCGGCCGCCATCGACGACTC
GCCCGCGCTGGCGGCGGCGCGCGGGCCCGGCCCCGCCATCCTGGTCGGCTGGTCCGACCTGTCCGCGCTCACCGGCACCT
ACGAGATCGACACGCGGGACGACTTCTTCTTCCCGACCGACGGCTTCCGCGGGGTGGCGCAGGTCACGTTCGGCTCCGCG
CTCCTCGGCGGCGACTACGAGTACAGCCGCTACCTGCTGCAGCTCGAGACCGCGTACGCGCTCCTCGGGCGCAGGCTCCG
GCTCCAGCTCGCGGCCGGCGCGGCGCAGGGCTCGGCGCCGTTCTTCGAGCGCTTCTACGCGGCGGACTGGTCGTACTTCA
CGGTCGGGCCGGCGCTCGGGCGTGCGCTCGAGCTGAACTTCTCCACCGACTCGCGCTACGACGCGGTCCTGGGCATGGCC
GGCCTCGAGTACGCCGTGCCGCTCTGGTCGCGCGGCGGCTTCTTCCACCGCGGCTACCTCGCGATCGGCGCGCGCGGGGT
GTGGTCGGCGGCGCGCCCAGGCGGCGGCCGCACCGCGGTGTCCGACCTGCCCTTCTCGGCGGACCTGGCGCTCCGCCTCG
ACACGCCGGTGGGCACCTTCAACGCCTCGCTCGGCTACGCGCTGGACAACTTCCTGTGA

Upstream 100 bases:

>100_bases
GCGCGAGCAGGAGCGGCGCTGACGCCGCCCGCCCCGGCCGCGACGCCGGCGCGGTGAATGCGGACCGCGGCCCCGCGTCT
TTCGGTAGACTCGCCGCCCG

Downstream 100 bases:

>100_bases
TCGCGCCGCCCGCCCGCACGGAGCCCTGCCGCGGGGCGCGCCGCGCCGCGCTCGCCGGCCTGGCGCTCGCGGCGCTCGCG
ATGGCGGCGCCGCCGGCCCG

Product: surface antigen variable number repeat-containing protein

Products: NA

Alternate protein names: Surface Antigen; Surface Antigen Variable Number Repeat Protein

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MPALPTLCALALLAAAPGASPVPAPAVPAPAPAPAGGPEAGPLGRRYHLERIELRGLTHTREAEVRRHLLVAPGDVLDTE
RVLLSRLRLLQLGWFSRVETRVERGSERGLVVLVIEVTERNTLIVSDLVFGSTGPQPFYGGLGLSQQNFLGRGMGLSGAF
VYGGSPSGRSDDPSRFALRGGFFAPDLTPRRLPPLVFGVSGQFLRGEELTCDDPGCEAYRSDYGRAPRIRYQRAAGEVTL
GMRPGPFERLLATYRYERLHAAAIDDSPALAAARGPGPAILVGWSDLSALTGTYEIDTRDDFFFPTDGFRGVAQVTFGSA
LLGGDYEYSRYLLQLETAYALLGRRLRLQLAAGAAQGSAPFFERFYAADWSYFTVGPALGRALELNFSTDSRYDAVLGMA
GLEYAVPLWSRGGFFHRGYLAIGARGVWSAARPGGGRTAVSDLPFSADLALRLDTPVGTFNASLGYALDNFL

Sequences:

>Translated_472_residues
MPALPTLCALALLAAAPGASPVPAPAVPAPAPAPAGGPEAGPLGRRYHLERIELRGLTHTREAEVRRHLLVAPGDVLDTE
RVLLSRLRLLQLGWFSRVETRVERGSERGLVVLVIEVTERNTLIVSDLVFGSTGPQPFYGGLGLSQQNFLGRGMGLSGAF
VYGGSPSGRSDDPSRFALRGGFFAPDLTPRRLPPLVFGVSGQFLRGEELTCDDPGCEAYRSDYGRAPRIRYQRAAGEVTL
GMRPGPFERLLATYRYERLHAAAIDDSPALAAARGPGPAILVGWSDLSALTGTYEIDTRDDFFFPTDGFRGVAQVTFGSA
LLGGDYEYSRYLLQLETAYALLGRRLRLQLAAGAAQGSAPFFERFYAADWSYFTVGPALGRALELNFSTDSRYDAVLGMA
GLEYAVPLWSRGGFFHRGYLAIGARGVWSAARPGGGRTAVSDLPFSADLALRLDTPVGTFNASLGYALDNFL
>Mature_471_residues
PALPTLCALALLAAAPGASPVPAPAVPAPAPAPAGGPEAGPLGRRYHLERIELRGLTHTREAEVRRHLLVAPGDVLDTER
VLLSRLRLLQLGWFSRVETRVERGSERGLVVLVIEVTERNTLIVSDLVFGSTGPQPFYGGLGLSQQNFLGRGMGLSGAFV
YGGSPSGRSDDPSRFALRGGFFAPDLTPRRLPPLVFGVSGQFLRGEELTCDDPGCEAYRSDYGRAPRIRYQRAAGEVTLG
MRPGPFERLLATYRYERLHAAAIDDSPALAAARGPGPAILVGWSDLSALTGTYEIDTRDDFFFPTDGFRGVAQVTFGSAL
LGGDYEYSRYLLQLETAYALLGRRLRLQLAAGAAQGSAPFFERFYAADWSYFTVGPALGRALELNFSTDSRYDAVLGMAG
LEYAVPLWSRGGFFHRGYLAIGARGVWSAARPGGGRTAVSDLPFSADLALRLDTPVGTFNASLGYALDNFL

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50739; Mature: 50608

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00242 INTEGRIN_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALPTLCALALLAAAPGASPVPAPAVPAPAPAPAGGPEAGPLGRRYHLERIELRGLTHT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
REAEVRRHLLVAPGDVLDTERVLLSRLRLLQLGWFSRVETRVERGSERGLVVLVIEVTER
HHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
NTLIVSDLVFGSTGPQPFYGGLGLSQQNFLGRGMGLSGAFVYGGSPSGRSDDPSRFALRG
CEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEC
GFFAPDLTPRRLPPLVFGVSGQFLRGEELTCDDPGCEAYRSDYGRAPRIRYQRAAGEVTL
CCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCEEE
GMRPGPFERLLATYRYERLHAAAIDDSPALAAARGPGPAILVGWSDLSALTGTYEIDTRD
CCCCCHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCEEEEECCCHHHHCCEEEECCCC
DFFFPTDGFRGVAQVTFGSALLGGDYEYSRYLLQLETAYALLGRRLRLQLAAGAAQGSAP
CEECCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCCCH
FFERFYAADWSYFTVGPALGRALELNFSTDSRYDAVLGMAGLEYAVPLWSRGGFFHRGYL
HHHHHHHCCCCEEEECHHCCCEEEEECCCCCCHHHHHHHCCCHHCCCHHCCCCCEECCEE
AIGARGVWSAARPGGGRTAVSDLPFSADLALRLDTPVGTFNASLGYALDNFL
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
PALPTLCALALLAAAPGASPVPAPAVPAPAPAPAGGPEAGPLGRRYHLERIELRGLTHT
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
REAEVRRHLLVAPGDVLDTERVLLSRLRLLQLGWFSRVETRVERGSERGLVVLVIEVTER
HHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
NTLIVSDLVFGSTGPQPFYGGLGLSQQNFLGRGMGLSGAFVYGGSPSGRSDDPSRFALRG
CEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEC
GFFAPDLTPRRLPPLVFGVSGQFLRGEELTCDDPGCEAYRSDYGRAPRIRYQRAAGEVTL
CCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCEEE
GMRPGPFERLLATYRYERLHAAAIDDSPALAAARGPGPAILVGWSDLSALTGTYEIDTRD
CCCCCHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCEEEEECCCHHHHCCEEEECCCC
DFFFPTDGFRGVAQVTFGSALLGGDYEYSRYLLQLETAYALLGRRLRLQLAAGAAQGSAP
CEECCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCCCH
FFERFYAADWSYFTVGPALGRALELNFSTDSRYDAVLGMAGLEYAVPLWSRGGFFHRGYL
HHHHHHHCCCCEEEECHHCCCEEEEECCCCCCHHHHHHHCCCHHCCCHHCCCCCEECCEE
AIGARGVWSAARPGGGRTAVSDLPFSADLALRLDTPVGTFNASLGYALDNFL
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA