Click here to switch to the map view.

The map label for this gene is 220916013

Identifier: 220916013

GI number: 220916013

Start: 1017927

End: 1018295

Strand: Reverse

Name: 220916013

Synonym: A2cp1_0899

Alternate gene names: NA

Gene position: 1018295-1017927 (Counterclockwise)

Preceding gene: 220916015

Following gene: 220916004

Centisome position: 20.25

GC content: 71.54

Gene sequence:

>369_bases
ATGGACATGAACTTCGACGAAACCCGCGCGAGCGGTGCCCCGCAGCAGGCCGGCCGCGCCGAGACCGTCCGGGCCGCGCT
CGTCGTGGTCCACTCCGGCGACGCCGGCCGGCAGGGGACGCGCTACCCGCTCGGCGACGAGGACGTCACCCTCGGCCGCG
ACGACGGGAACACGGTGGTGATCGGGTCCGACCAGGCCTCGCGCCGGCACGCCCGCATCTTCGTGTCGGGCGGCGTGCAC
GTGCTGGTGGACCTCGACTCCACCAACGGCACGTTCCTGAACTCGAAGCAGGTGAAGGAGCAGACGCTCCGGCACGGCGA
CGTGCTCCGCATCGCCTCCACCGTGCTGAAGTACGCGGTGGACGCGTAG

Upstream 100 bases:

>100_bases
GTGTCGGTGGGCCGCTCGGGAGGGAGGAGCGATGGCGACGTTCGCGCGACGGCGGCCCCGGGCAGCCCCTTCACCGCGAG
ACCCGGCCCGTGCTAACGCC

Downstream 100 bases:

>100_bases
CCGCGCGCCGGCCCGCGCCTACATGAAGCCGAGCTGGAGCTTGGCCGCCTCGCTCATCCGCGACGGATCCCAGGGCGGGT
CGAACACCAGGTCCACCTCG

Product: FHA domain containing protein

Products: NA

Alternate protein names: Fha Domain/Ggdef Domain Protein; Diguanylate Cyclase; FHA Domain/GGDEF Domain-Containing Protein; GAF Sensor Signal Transduction Histidine Kinase; Fha Domain Protein; Forkhead-Associated Protein

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDMNFDETRASGAPQQAGRAETVRAALVVVHSGDAGRQGTRYPLGDEDVTLGRDDGNTVVIGSDQASRRHARIFVSGGVH
VLVDLDSTNGTFLNSKQVKEQTLRHGDVLRIASTVLKYAVDA

Sequences:

>Translated_122_residues
MDMNFDETRASGAPQQAGRAETVRAALVVVHSGDAGRQGTRYPLGDEDVTLGRDDGNTVVIGSDQASRRHARIFVSGGVH
VLVDLDSTNGTFLNSKQVKEQTLRHGDVLRIASTVLKYAVDA
>Mature_122_residues
MDMNFDETRASGAPQQAGRAETVRAALVVVHSGDAGRQGTRYPLGDEDVTLGRDDGNTVVIGSDQASRRHARIFVSGGVH
VLVDLDSTNGTFLNSKQVKEQTLRHGDVLRIASTVLKYAVDA

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13063; Mature: 13063

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMNFDETRASGAPQQAGRAETVRAALVVVHSGDAGRQGTRYPLGDEDVTLGRDDGNTVV
CCCCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEE
IGSDQASRRHARIFVSGGVHVLVDLDSTNGTFLNSKQVKEQTLRHGDVLRIASTVLKYAV
EECCCCCCCEEEEEEECCEEEEEEECCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHC
DA
CC
>Mature Secondary Structure
MDMNFDETRASGAPQQAGRAETVRAALVVVHSGDAGRQGTRYPLGDEDVTLGRDDGNTVV
CCCCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEE
IGSDQASRRHARIFVSGGVHVLVDLDSTNGTFLNSKQVKEQTLRHGDVLRIASTVLKYAV
EECCCCCCCEEEEEEECCEEEEEEECCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHC
DA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA