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The map label for this gene is fliP [H]

Identifier: 220915856

GI number: 220915856

Start: 833886

End: 834563

Strand: Reverse

Name: fliP [H]

Synonym: A2cp1_0739

Alternate gene names: 220915856

Gene position: 834563-833886 (Counterclockwise)

Preceding gene: 220915857

Following gene: 220915855

Centisome position: 16.59

GC content: 76.11

Gene sequence:

>678_bases
GTGATCGCCGCCGCGCTCGCCGCCTCCGCCGGCCCGGTGGCCGACCGGCCCGCCGAGATGCTGGTGCTGCTCGCGCTGCT
CGCGCTCGTGCCCGCGGCGCTGGTGATGCTCACCTCGTTCCTGAAGATCTCGGTGGTCCTGTCGATCGCGCGCTCGGCGC
TGGGCGCGCCGCAGGTGCCGCCGAACACGGTCGTCACCGGCCTCGCGCTGGTGCTGACGATGCTGGTCATGGCGCCGGTG
GCCGAGCGCGCGGCCGCCCTGGCGCGGCCCGCGCCCGGCGAGCGCGGCCTCGCGGCCTCGCTGGCGGCGCTCCAGCGCGG
CGCCGGGCCGGTGAAGGCGTTCCTCGCGCGCTTCGCGCGGCCCGACGACCGGGCCGCGTTCCTCGACGTGGCGCGGCGGC
TCCGCGCGCCGGACGCCGCCCCGCCGGCGGACGACGACCTGGCGGTGCTCGCGCCCGCGTTCGTGGTGTCCGAGCTGCGC
CGGGCCTTCACCATCGGCTTCCTGGTGTTCGTGCCGTTCCTGGTGGTGGACCTGGTGATCTCGAACGTGCTGCTCGCGCT
CGGCCTCACCCAGCTCTCGCCCACCTCGGTCGCGCTCCCGTTCAAGCTCCTCCTCTTCGTCGCCGTCGACGGGTGGAAGC
TCCTCGCCCGCGCCCTGGCGCTGTCGTACGCAGGGTGA

Upstream 100 bases:

>100_bases
TGGTGGAGGTGGATGGGCGCCGGCTGCTGGTCGGGTTCGGGTCCGACCGGGTCGCGCTGCTCGACGGCGCGCCGGCGGCG
ACCGCCCCGGGAGACCGGCC

Downstream 100 bases:

>100_bases
TCGCGATGGATCCCGCCCTCCTCCACCTCGGCCGCGAGGCGCTCCTGCTCGTGCTGGTGCTCTCCGCCCCGCCGCTCGGC
GCCGCGCTCCTGGTCGGCCT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIAAALAASAGPVADRPAEMLVLLALLALVPAALVMLTSFLKISVVLSIARSALGAPQVPPNTVVTGLALVLTMLVMAPV
AERAAALARPAPGERGLAASLAALQRGAGPVKAFLARFARPDDRAAFLDVARRLRAPDAAPPADDDLAVLAPAFVVSELR
RAFTIGFLVFVPFLVVDLVISNVLLALGLTQLSPTSVALPFKLLLFVAVDGWKLLARALALSYAG

Sequences:

>Translated_225_residues
MIAAALAASAGPVADRPAEMLVLLALLALVPAALVMLTSFLKISVVLSIARSALGAPQVPPNTVVTGLALVLTMLVMAPV
AERAAALARPAPGERGLAASLAALQRGAGPVKAFLARFARPDDRAAFLDVARRLRAPDAAPPADDDLAVLAPAFVVSELR
RAFTIGFLVFVPFLVVDLVISNVLLALGLTQLSPTSVALPFKLLLFVAVDGWKLLARALALSYAG
>Mature_225_residues
MIAAALAASAGPVADRPAEMLVLLALLALVPAALVMLTSFLKISVVLSIARSALGAPQVPPNTVVTGLALVLTMLVMAPV
AERAAALARPAPGERGLAASLAALQRGAGPVKAFLARFARPDDRAAFLDVARRLRAPDAAPPADDDLAVLAPAFVVSELR
RAFTIGFLVFVPFLVVDLVISNVLLALGLTQLSPTSVALPFKLLLFVAVDGWKLLARALALSYAG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=216, Percent_Identity=43.0555555555556, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 23198; Mature: 23198

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAALAASAGPVADRPAEMLVLLALLALVPAALVMLTSFLKISVVLSIARSALGAPQVP
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PNTVVTGLALVLTMLVMAPVAERAAALARPAPGERGLAASLAALQRGAGPVKAFLARFAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC
PDDRAAFLDVARRLRAPDAAPPADDDLAVLAPAFVVSELRRAFTIGFLVFVPFLVVDLVI
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNVLLALGLTQLSPTSVALPFKLLLFVAVDGWKLLARALALSYAG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAAALAASAGPVADRPAEMLVLLALLALVPAALVMLTSFLKISVVLSIARSALGAPQVP
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PNTVVTGLALVLTMLVMAPVAERAAALARPAPGERGLAASLAALQRGAGPVKAFLARFAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC
PDDRAAFLDVARRLRAPDAAPPADDDLAVLAPAFVVSELRRAFTIGFLVFVPFLVVDLVI
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNVLLALGLTQLSPTSVALPFKLLLFVAVDGWKLLARALALSYAG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]