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The map label for this gene is xcpQ [H]

Identifier: 220915838

GI number: 220915838

Start: 810114

End: 812822

Strand: Reverse

Name: xcpQ [H]

Synonym: A2cp1_0721

Alternate gene names: 220915838

Gene position: 812822-810114 (Counterclockwise)

Preceding gene: 220915839

Following gene: 220915837

Centisome position: 16.16

GC content: 72.35

Gene sequence:

>2709_bases
ATGAAGAAGCTCCTTGCCACGACGTTGCTCGTCCCGGTGCTCGCCGCCGCGCAGGTCCCGCTGCGCCCGACCGACGACCC
CGAGTCGCCGGCGCGGCAGCGCCCGCCCACCACCCGGCCCACCTCGCCGCCGACCGGCATCCCCACCACGCCGCCGCCCC
CGGGGACCTCCATCGGTCCGGGCGGCGTGGCCCCGATCCAGCAGAACGGCGCGCGGCCGCCCGCGGCGCGGCCCACCTCC
CCGGCCCCGCGCCCCGGCGGCGCGGCCACGCCCCCCCCCGCGCCCGCGCGGGGCGGCGGCGGCGAGGCCGAGACCACGCT
GCAGCCGGCGAACGGCAGGTGCGTCCCGATGCAGGGGCGCTTCATGCTGACGTTCAACCGGGCCGAGGTGGTGGACGTGC
TCGAGCAGGCGAGCCGCTGGACCTGCCGGAACTTCATCTACACGGAGGACGTGGCGCGCGGGAAGATCACGCTGCTCTCC
AAGACGCCGGTCACCGCGGAGGAGGCGTACGCCGCGTTCCTGGCCGCGCTGAACGCGAACAACATCACGGTGTATCCGAC
GGGCCGGTACTGGCGCCTGGGCCGCGCCGCCGACAGCAAGAAGATGCCCATCCCGACGTACACCGACCCGGAGAGCGGCA
CGCCGGCGAGCGAGCAGGTCATCACCAAGGTGATCCGCCTGCAGTACGCCGACGCCGACCAGCTCCGCGGCGTGATGGGC
AACTTCATCTCGCCGCAGGGCGCGGACATCCAGTCCATCCCCCCCTCGACGCTGGTCATCACCGACACCGGCCTCAACAT
CCGCCGCATCGAGAAGATGATCGAGGCGATCGACAAGGTCGGCGGCGGCGACCTGGTCCGCATCGTCCAGGTGCGCTACG
CGTCCGCCAAGGACCTCGCCGACAAGGTGAACCAGATCTTCCAGGCGCAGGGCGGGCGGAGCCCGCGCCCGGCGCGGATC
TCCAGCGGCCCGGCGCGGCCCGGCGTCCCCACCACCCAGCCCGCGGGCGGCTCGGTCGAGGTCTCGGTCTACAAGGTCCT
CCCCGACGACCGCACCAACAAGCTCATCGTCATCGCGGACGAGAAGAGCTTCCAGCAGATCATGGAGCTGGTGCAGCAGC
TCGACGTGCCCACCAGCGCCGACGGCGGCGTCCACGTCCTGTTCCTCAAGAACGCGAACGCGGAGGAGCTCGCCACCACG
CTGTCGAACCTGGCGCAGGGCCAGGCCAAGCGCACCCCCACGCCCGGCGCGCCGACGCAGCCGGCCGCGCGACCGGTGGG
CATGCCCGGGGCGCCCCCCGCCGCCGCGGCGGCGCCCGCCCCGGCCGGCGACGTCACCGCCGAGCTGTTCTCGGGCGAGG
TGAAGATCACCGCCGACAAGACGCAGAACGCGCTGCTCGTGCAGGCGAGCGGGGCCGACTTCTCCGCGGTCCAGCGGCTG
GTCGAGAAGCTCGACCGGCCGCGGCGCCAGGTGTTCGTCGAGGCGGTGATCATGGAGGTGAACCTCAAGAACTCCATGGA
GCTCGGCGTCAGCGCGCACGGCGCGATCCCCTACAAGTACAAGGGGGACACCGGCGTCATCCCGCTCTCGTCGCAGACCG
GGCGCGTCAACTCGCTCGACATGTCGAGCGCGATCGCGCTGGGCGGGTTCCTCACCGGCTACACCGGCCCGATCTCCGCG
GAGCTGAAGGACCTCGGCTTCGGCAACATCCCCAGCCTCGGCCTGCTCATCCAGGCGCTGCAGTCCAACTCCGACGTGAA
CGTGCTCTCCACGCCGCACCTGCTCGCCACCGACAACGAGGAGTCGGAGATCACGGTGGGCCAGAACGTGCCGTTCCAGT
CCGGCTACGCGCCCTCCGGGCTGTCCAACCTGCTCTCCGGCTCCGGCACCGGCGCCAGCAGCACCGTCGGCTCCGCGCTC
GGCACCCAGGGCCTGGGCTCGCTCTACGCGCCCATCCAGCGGCAGAACGTGGAGCTGAAGCTCAAGATCAAGCCGCAGAT
CAACGAGGGCGGGAACATCCGGCTCACCATCGAGGAGCAGACCGAGGAGATCGCGGAGAAGGACCCGCAGCTCGGCCCGA
CCACCGCCAAGCGCAGCGTGAAGACGCAGATCGTGGCGCGCGACCAGAGCACCATCGTCATCGGCGGGCTCATCCAGGAC
CGCGCCATCCGCAGCGTGTCCAAGATCCCGTTCCTCGGCAGCCTGCCCATCCTCGGCTGGCTGTTCCGCGACACCACCAC
GACCAAGCAGAAGGTGAACCTGCTGCTCTTCCTCACGCCGTACATCATCCGCGACGAGGCGGACTACCGGCGCATCTACG
AGAAGAAGCGCGAGGAGCAGCAGCAGTTCATCGAGCAGTTCTACGGGCGGCAGCCGCGCTACGACGTGGACGTGGACTTC
AGCCGCAAGACCGGCCCGTACTCGCGCCTGCGCCGGGGCGTGAGCCAGGAGACCTCGCGGATCGAGAACGGCGGCGACGG
CGCGCCGGGCGAGTACCTGTCCGCTCCCCCCGCCGGCGGCCCGCCGCCGACCACCGTGGTCCCGGTGCCGCGCCCGACCT
CGCCCGCGCCCGCGCCCGAGCCGGAGGCCGCGCCGGACGCGGCGCCGCCGCCCGAGGGCACGCCCGAGCCGGTGGAGCGG
CTCTCGCCGCAGCAGCCGCCGCCCGCCGCGGAGCCGGCCGCGCCCGGAGGGACCCCACCGCAGGAATGA

Upstream 100 bases:

>100_bases
CGCGACTCCGGGCACGTGACCATCGAGCTCGAGCGGCAGGGGCAGCCGATCCGCAAGGAGTACAACATCACCGGCCCGTG
ATCCCGGCCGAGGGAACGCC

Downstream 100 bases:

>100_bases
GCGGGGGCGGACCGTCCGTTTCACGGGATCCTCATGCCCAACGACGCACAGATCGACAACGCCCGGGCCGCCGTCCAGGG
CGCCATCCCCGGGCTCGCCG

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 902; Mature: 902

Protein sequence:

>902_residues
MKKLLATTLLVPVLAAAQVPLRPTDDPESPARQRPPTTRPTSPPTGIPTTPPPPGTSIGPGGVAPIQQNGARPPAARPTS
PAPRPGGAATPPPAPARGGGGEAETTLQPANGRCVPMQGRFMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLS
KTPVTAEEAYAAFLAALNANNITVYPTGRYWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLRGVMG
NFISPQGADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYASAKDLADKVNQIFQAQGGRSPRPARI
SSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNKLIVIADEKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATT
LSNLAQGQAKRTPTPGAPTQPAARPVGMPGAPPAAAAAPAPAGDVTAELFSGEVKITADKTQNALLVQASGADFSAVQRL
VEKLDRPRRQVFVEAVIMEVNLKNSMELGVSAHGAIPYKYKGDTGVIPLSSQTGRVNSLDMSSAIALGGFLTGYTGPISA
ELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPHLLATDNEESEITVGQNVPFQSGYAPSGLSNLLSGSGTGASSTVGSAL
GTQGLGSLYAPIQRQNVELKLKIKPQINEGGNIRLTIEEQTEEIAEKDPQLGPTTAKRSVKTQIVARDQSTIVIGGLIQD
RAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRIYEKKREEQQQFIEQFYGRQPRYDVDVDF
SRKTGPYSRLRRGVSQETSRIENGGDGAPGEYLSAPPAGGPPPTTVVPVPRPTSPAPAPEPEAAPDAAPPPEGTPEPVER
LSPQQPPPAAEPAAPGGTPPQE

Sequences:

>Translated_902_residues
MKKLLATTLLVPVLAAAQVPLRPTDDPESPARQRPPTTRPTSPPTGIPTTPPPPGTSIGPGGVAPIQQNGARPPAARPTS
PAPRPGGAATPPPAPARGGGGEAETTLQPANGRCVPMQGRFMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLS
KTPVTAEEAYAAFLAALNANNITVYPTGRYWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLRGVMG
NFISPQGADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYASAKDLADKVNQIFQAQGGRSPRPARI
SSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNKLIVIADEKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATT
LSNLAQGQAKRTPTPGAPTQPAARPVGMPGAPPAAAAAPAPAGDVTAELFSGEVKITADKTQNALLVQASGADFSAVQRL
VEKLDRPRRQVFVEAVIMEVNLKNSMELGVSAHGAIPYKYKGDTGVIPLSSQTGRVNSLDMSSAIALGGFLTGYTGPISA
ELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPHLLATDNEESEITVGQNVPFQSGYAPSGLSNLLSGSGTGASSTVGSAL
GTQGLGSLYAPIQRQNVELKLKIKPQINEGGNIRLTIEEQTEEIAEKDPQLGPTTAKRSVKTQIVARDQSTIVIGGLIQD
RAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRIYEKKREEQQQFIEQFYGRQPRYDVDVDF
SRKTGPYSRLRRGVSQETSRIENGGDGAPGEYLSAPPAGGPPPTTVVPVPRPTSPAPAPEPEAAPDAAPPPEGTPEPVER
LSPQQPPPAAEPAAPGGTPPQE
>Mature_902_residues
MKKLLATTLLVPVLAAAQVPLRPTDDPESPARQRPPTTRPTSPPTGIPTTPPPPGTSIGPGGVAPIQQNGARPPAARPTS
PAPRPGGAATPPPAPARGGGGEAETTLQPANGRCVPMQGRFMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLS
KTPVTAEEAYAAFLAALNANNITVYPTGRYWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLRGVMG
NFISPQGADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYASAKDLADKVNQIFQAQGGRSPRPARI
SSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNKLIVIADEKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATT
LSNLAQGQAKRTPTPGAPTQPAARPVGMPGAPPAAAAAPAPAGDVTAELFSGEVKITADKTQNALLVQASGADFSAVQRL
VEKLDRPRRQVFVEAVIMEVNLKNSMELGVSAHGAIPYKYKGDTGVIPLSSQTGRVNSLDMSSAIALGGFLTGYTGPISA
ELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPHLLATDNEESEITVGQNVPFQSGYAPSGLSNLLSGSGTGASSTVGSAL
GTQGLGSLYAPIQRQNVELKLKIKPQINEGGNIRLTIEEQTEEIAEKDPQLGPTTAKRSVKTQIVARDQSTIVIGGLIQD
RAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRIYEKKREEQQQFIEQFYGRQPRYDVDVDF
SRKTGPYSRLRRGVSQETSRIENGGDGAPGEYLSAPPAGGPPPTTVVPVPRPTSPAPAPEPEAAPDAAPPPEGTPEPVER
LSPQQPPPAAEPAAPGGTPPQE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=683, Percent_Identity=27.9648609077599, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1789793, Length=334, Percent_Identity=24.8502994011976, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 95489; Mature: 95489

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLATTLLVPVLAAAQVPLRPTDDPESPARQRPPTTRPTSPPTGIPTTPPPPGTSIGP
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGVAPIQQNGARPPAARPTSPAPRPGGAATPPPAPARGGGGEAETTLQPANGRCVPMQGR
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCC
FMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLSKTPVTAEEAYAAFLAALNAN
EEEEECHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
NITVYPTGRYWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLRGVMG
CEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
NFISPQGADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYASAKDLA
CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHH
DKVNQIFQAQGGRSPRPARISSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNKLIVIAD
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
EKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATTLSNLAQGQAKRTPTPGAPTQ
CHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAARPVGMPGAPPAAAAAPAPAGDVTAELFSGEVKITADKTQNALLVQASGADFSAVQRL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCEEEEEECCCCHHHHHHH
VEKLDRPRRQVFVEAVIMEVNLKNSMELGVSAHGAIPYKYKGDTGVIPLSSQTGRVNSLD
HHHHCCHHHHHHHHHHHEEECCCCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCCC
MSSAIALGGFLTGYTGPISAELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPHLLATDNE
HHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCEEEECCCC
ESEITVGQNVPFQSGYAPSGLSNLLSGSGTGASSTVGSALGTQGLGSLYAPIQRQNVELK
CCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHCCHHHCCCEEE
LKIKPQINEGGNIRLTIEEQTEEIAEKDPQLGPTTAKRSVKTQIVARDQSTIVIGGLIQD
EEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCCEEEEECHHHH
RAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRIYEKKREEQ
HHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHEEEEEEECCEEEECCHHHHHHHHHHHHHH
QQFIEQFYGRQPRYDVDVDFSRKTGPYSRLRRGVSQETSRIENGGDGAPGEYLSAPPAGG
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PPPTTVVPVPRPTSPAPAPEPEAAPDAAPPPEGTPEPVERLSPQQPPPAAEPAAPGGTPP
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
QE
CC
>Mature Secondary Structure
MKKLLATTLLVPVLAAAQVPLRPTDDPESPARQRPPTTRPTSPPTGIPTTPPPPGTSIGP
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGVAPIQQNGARPPAARPTSPAPRPGGAATPPPAPARGGGGEAETTLQPANGRCVPMQGR
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCC
FMLTFNRAEVVDVLEQASRWTCRNFIYTEDVARGKITLLSKTPVTAEEAYAAFLAALNAN
EEEEECHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
NITVYPTGRYWRLGRAADSKKMPIPTYTDPESGTPASEQVITKVIRLQYADADQLRGVMG
CEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
NFISPQGADIQSIPPSTLVITDTGLNIRRIEKMIEAIDKVGGGDLVRIVQVRYASAKDLA
CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHH
DKVNQIFQAQGGRSPRPARISSGPARPGVPTTQPAGGSVEVSVYKVLPDDRTNKLIVIAD
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
EKSFQQIMELVQQLDVPTSADGGVHVLFLKNANAEELATTLSNLAQGQAKRTPTPGAPTQ
CHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAARPVGMPGAPPAAAAAPAPAGDVTAELFSGEVKITADKTQNALLVQASGADFSAVQRL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCEEEEEECCCCHHHHHHH
VEKLDRPRRQVFVEAVIMEVNLKNSMELGVSAHGAIPYKYKGDTGVIPLSSQTGRVNSLD
HHHHCCHHHHHHHHHHHEEECCCCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCCC
MSSAIALGGFLTGYTGPISAELKDLGFGNIPSLGLLIQALQSNSDVNVLSTPHLLATDNE
HHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCEEEECCCC
ESEITVGQNVPFQSGYAPSGLSNLLSGSGTGASSTVGSALGTQGLGSLYAPIQRQNVELK
CCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHCCHHHCCCEEE
LKIKPQINEGGNIRLTIEEQTEEIAEKDPQLGPTTAKRSVKTQIVARDQSTIVIGGLIQD
EEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCCEEEEECHHHH
RAIRSVSKIPFLGSLPILGWLFRDTTTTKQKVNLLLFLTPYIIRDEADYRRIYEKKREEQ
HHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHEEEEEEECCEEEECCHHHHHHHHHHHHHH
QQFIEQFYGRQPRYDVDVDFSRKTGPYSRLRRGVSQETSRIENGGDGAPGEYLSAPPAGG
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PPPTTVVPVPRPTSPAPAPEPEAAPDAAPPPEGTPEPVERLSPQQPPPAAEPAAPGGTPP
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
QE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]