| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915785
Identifier: 220915785
GI number: 220915785
Start: 745376
End: 747103
Strand: Reverse
Name: 220915785
Synonym: A2cp1_0666
Alternate gene names: NA
Gene position: 747103-745376 (Counterclockwise)
Preceding gene: 220915786
Following gene: 220915784
Centisome position: 14.85
GC content: 71.82
Gene sequence:
>1728_bases TTGACGCACGCCGGCGACGCGCCGGACGCCCGCGTCGGCGGGACCATCCGACCCTCCGCCCACCTCGCCGCCGTCGTCGC GGTGATCCTGCTGGGCCTCGCCGCCTACGCGAACGCCTGGCACAGTGCGTTCGTGTTCGATGATGTCGATCACGTCCGCG ACAACCCGATCGTTCGGAACCCCTCGGCCTTCGGCTGGAACGGCGGTGGATGGCGTGCGCTCCCGAGCCGCAGCATCGCC TACCTGTCGTTCGCGCTGAACTACCGGTTCGGCGGGAGTGACCCGGTCGGCTTTCACGCGGTGAACGTCGCAATGCACCT GCTCACGGCGACGCTGGTGTACGCGCTGGTGATCGCCGCGTTCCGTACGCCGCGCCTCGCGCGATCGGCCCTGGCGGCCC AGGCGAGCACGGTCGGCCTCGTCGCCGCGGCGCTCTTCGTCGCGCACCCGCTGCAGACCCAGGCGGTTACCTACGTCGTC CAGCGGATGACCTCGCTGGCTGCGCTATTCTACCTAGGCGCCGTGGCTCTCTACGCGCGCTGGCGGCTGATGGACGCGAC GCGGCACCGCTGGGGCCGCCCGGCCGCATACGCCGGGATGCTCGCGTGCGCGGTGCTCGCGATGAGGACGAAGGAGATCG CGTTCACGCTGCCCTTCGCGATCGCCCTGTACGAGCTCACGTTCTTCGAGCCGGACGGCCGGCGGCTCCGGCGCCTCTGG CCCATCCTCACCACCGCGGCGATCATTCCACTCACGGTCCTCCTCACCGCGACAGCGGGCGGTGGCGCGGACGTGGCGAG CACCACGCTCGCCGCCACGCGCGTGCAGACCGATCTCAGCCGCCTCGAGTACCTGATCACGCAGATACCCGTGGTGGTCA CCTACCTGTTCCTGCTGCTCGTGCCGGTCGGGCAGAACATCGACCACGATTACCCGATCTACCGGTCGTTCTTCGCCCCC GAGGTACGCTCCGGGCTGGCGGTCCTCGCCGCGGCCGCGTGCGCCGGAGCGTGGGCGTACGCGCGGACCTCGGGGAAGGC GCGCAGCCCGGCGGATCCCGCGGCCCGGCTGGTGGGGTTCTGCGTCGCGTGGTGGTTCCTGACGCTCGCCGTCGAGTCGA GCGTCATCCCCATCGTGGACGTGATCAACGAGCACCGCGTCTACCTGCCCTCCGTCGGCTTCTTCGTCGCTGCCGCGATC GGGATCCTGCTCGCCGCGCGCCGGGCAGTCGGGGCAGACGTCGCGCCGCGTGCCGCCGCACTGGCGGGGATCGGCCTGGC CTGCGTCTTCGCGGTCGCCACCCTGGCCCGGAATCGCGTCTGGTCGAGCGACGTGGCGCTCTGGACTGATGCAGCCGCGA AGTCCCCGAACAAGATGCGGCCCAACCTGAACCTCGGGACCGCGCTGGTCGAGGCGGGGCGGTTTCGCGAGGCCGAAGCG CCGCTCCGTCGAGCCGCGCTGCTGGATCCCGCGTCGGCGCTCCCGCACGTGCAGCTCGCGGGCGTGCTCCTGACGCAGCG GCGCGGTGCCGAGGCGGAGGCGGAGCTGCGCTCGGCGCTCCGCCTCGCCCCTCGCGATCCGGACGCCACCTTCAACCTCG CGATGCTGCTGTCCGGGTCGAACCGCTCGGACGAGGCGAGGCCGCTGTTCAGCCGGTTCCTCGAGATCGCGCCCGCCTCG TACGGGCGAGCGCGGCGGATCGCCGCCGATCGGCTCGCCTCGCATTGA
Upstream 100 bases:
>100_bases CGCCGCCGGCCTCGGCGTGGCTCGCGAGCGCGTACGCGCTGCTCTACGCCGGCGCGGTGCTCGCGCTGGCGGCGGCTGCT TTCGAGCGCCGGGATTTCCG
Downstream 100 bases:
>100_bases GCGATGCCGCACGGCGTCGCCCCGCCCCCCTACATGCAAAGTTTGTCGAATCCTGCATCGGTTGTCGGCCGCGGCTCGCG CAGCTCACATGAAACCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Protein)
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MTHAGDAPDARVGGTIRPSAHLAAVVAVILLGLAAYANAWHSAFVFDDVDHVRDNPIVRNPSAFGWNGGGWRALPSRSIA YLSFALNYRFGGSDPVGFHAVNVAMHLLTATLVYALVIAAFRTPRLARSALAAQASTVGLVAAALFVAHPLQTQAVTYVV QRMTSLAALFYLGAVALYARWRLMDATRHRWGRPAAYAGMLACAVLAMRTKEIAFTLPFAIALYELTFFEPDGRRLRRLW PILTTAAIIPLTVLLTATAGGGADVASTTLAATRVQTDLSRLEYLITQIPVVVTYLFLLLVPVGQNIDHDYPIYRSFFAP EVRSGLAVLAAAACAGAWAYARTSGKARSPADPAARLVGFCVAWWFLTLAVESSVIPIVDVINEHRVYLPSVGFFVAAAI GILLAARRAVGADVAPRAAALAGIGLACVFAVATLARNRVWSSDVALWTDAAAKSPNKMRPNLNLGTALVEAGRFREAEA PLRRAALLDPASALPHVQLAGVLLTQRRGAEAEAELRSALRLAPRDPDATFNLAMLLSGSNRSDEARPLFSRFLEIAPAS YGRARRIAADRLASH
Sequences:
>Translated_575_residues MTHAGDAPDARVGGTIRPSAHLAAVVAVILLGLAAYANAWHSAFVFDDVDHVRDNPIVRNPSAFGWNGGGWRALPSRSIA YLSFALNYRFGGSDPVGFHAVNVAMHLLTATLVYALVIAAFRTPRLARSALAAQASTVGLVAAALFVAHPLQTQAVTYVV QRMTSLAALFYLGAVALYARWRLMDATRHRWGRPAAYAGMLACAVLAMRTKEIAFTLPFAIALYELTFFEPDGRRLRRLW PILTTAAIIPLTVLLTATAGGGADVASTTLAATRVQTDLSRLEYLITQIPVVVTYLFLLLVPVGQNIDHDYPIYRSFFAP EVRSGLAVLAAAACAGAWAYARTSGKARSPADPAARLVGFCVAWWFLTLAVESSVIPIVDVINEHRVYLPSVGFFVAAAI GILLAARRAVGADVAPRAAALAGIGLACVFAVATLARNRVWSSDVALWTDAAAKSPNKMRPNLNLGTALVEAGRFREAEA PLRRAALLDPASALPHVQLAGVLLTQRRGAEAEAELRSALRLAPRDPDATFNLAMLLSGSNRSDEARPLFSRFLEIAPAS YGRARRIAADRLASH >Mature_574_residues THAGDAPDARVGGTIRPSAHLAAVVAVILLGLAAYANAWHSAFVFDDVDHVRDNPIVRNPSAFGWNGGGWRALPSRSIAY LSFALNYRFGGSDPVGFHAVNVAMHLLTATLVYALVIAAFRTPRLARSALAAQASTVGLVAAALFVAHPLQTQAVTYVVQ RMTSLAALFYLGAVALYARWRLMDATRHRWGRPAAYAGMLACAVLAMRTKEIAFTLPFAIALYELTFFEPDGRRLRRLWP ILTTAAIIPLTVLLTATAGGGADVASTTLAATRVQTDLSRLEYLITQIPVVVTYLFLLLVPVGQNIDHDYPIYRSFFAPE VRSGLAVLAAAACAGAWAYARTSGKARSPADPAARLVGFCVAWWFLTLAVESSVIPIVDVINEHRVYLPSVGFFVAAAIG ILLAARRAVGADVAPRAAALAGIGLACVFAVATLARNRVWSSDVALWTDAAAKSPNKMRPNLNLGTALVEAGRFREAEAP LRRAALLDPASALPHVQLAGVLLTQRRGAEAEAELRSALRLAPRDPDATFNLAMLLSGSNRSDEARPLFSRFLEIAPASY GRARRIAADRLASH
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24656717, Length=234, Percent_Identity=26.4957264957265, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI18110006, Length=234, Percent_Identity=26.4957264957265, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61516; Mature: 61385
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAGDAPDARVGGTIRPSAHLAAVVAVILLGLAAYANAWHSAFVFDDVDHVRDNPIVRN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC PSAFGWNGGGWRALPSRSIAYLSFALNYRFGGSDPVGFHAVNVAMHLLTATLVYALVIAA CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRTPRLARSALAAQASTVGLVAAALFVAHPLQTQAVTYVVQRMTSLAALFYLGAVALYAR HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRLMDATRHRWGRPAAYAGMLACAVLAMRTKEIAFTLPFAIALYELTFFEPDGRRLRRLW HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH PILTTAAIIPLTVLLTATAGGGADVASTTLAATRVQTDLSRLEYLITQIPVVVTYLFLLL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVGQNIDHDYPIYRSFFAPEVRSGLAVLAAAACAGAWAYARTSGKARSPADPAARLVGF HHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH CVAWWFLTLAVESSVIPIVDVINEHRVYLPSVGFFVAAAIGILLAARRAVGADVAPRAAA HHHHHHHHHHHHCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LAGIGLACVFAVATLARNRVWSSDVALWTDAAAKSPNKMRPNLNLGTALVEAGRFREAEA HHHHHHHHHHHHHHHHHCCCCCCCHHHEECHHHCCCCCCCCCCCHHHHHHHHCCCCCHHH PLRRAALLDPASALPHVQLAGVLLTQRRGAEAEAELRSALRLAPRDPDATFNLAMLLSGS HHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECC NRSDEARPLFSRFLEIAPASYGRARRIAADRLASH CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure THAGDAPDARVGGTIRPSAHLAAVVAVILLGLAAYANAWHSAFVFDDVDHVRDNPIVRN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC PSAFGWNGGGWRALPSRSIAYLSFALNYRFGGSDPVGFHAVNVAMHLLTATLVYALVIAA CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRTPRLARSALAAQASTVGLVAAALFVAHPLQTQAVTYVVQRMTSLAALFYLGAVALYAR HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRLMDATRHRWGRPAAYAGMLACAVLAMRTKEIAFTLPFAIALYELTFFEPDGRRLRRLW HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH PILTTAAIIPLTVLLTATAGGGADVASTTLAATRVQTDLSRLEYLITQIPVVVTYLFLLL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVGQNIDHDYPIYRSFFAPEVRSGLAVLAAAACAGAWAYARTSGKARSPADPAARLVGF HHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH CVAWWFLTLAVESSVIPIVDVINEHRVYLPSVGFFVAAAIGILLAARRAVGADVAPRAAA HHHHHHHHHHHHCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LAGIGLACVFAVATLARNRVWSSDVALWTDAAAKSPNKMRPNLNLGTALVEAGRFREAEA HHHHHHHHHHHHHHHHHCCCCCCCHHHEECHHHCCCCCCCCCCCHHHHHHHHCCCCCHHH PLRRAALLDPASALPHVQLAGVLLTQRRGAEAEAELRSALRLAPRDPDATFNLAMLLSGS HHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECC NRSDEARPLFSRFLEIAPASYGRARRIAADRLASH CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA