Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is frzA [H]
Identifier: 220915754
GI number: 220915754
Start: 710072
End: 710560
Strand: Direct
Name: frzA [H]
Synonym: A2cp1_0635
Alternate gene names: 220915754
Gene position: 710072-710560 (Clockwise)
Preceding gene: 220915752
Following gene: 220915755
Centisome position: 14.12
GC content: 77.71
Gene sequence:
>489_bases ATGGCCGACCCGAAGCCCACCGACGCGACGGGCGCCGACGCCTGGTACTTCTGCCTCCGCCTGCTGGGCGCGCGCTACGC GTTCGAGGCGCCGCTCGTGACCGAGGTCGTGCGCCTGGGACCGCTCACCCGGCTCCCCGCCGCGCCCGCCTTCCTCCCCG GCGTGTTCACGCACCGTGGCGAGGTGCTGCCGGTGCTCGACATCGGCCTGCTGGTGGGCCACGGCGCCGTCGCCATCCGC GCCAGCACCCGCGCCGCCATCGTGCACTGCGGCCCGTGGAAGGTGGCGGTGGTGACCGAGGGCGTGGAGGGGCTCGTCGC GATCCCGCGGCGCGCCATCGAGCCGCCGCCGGCCGAGTCCTCCGGCATGGCCGAGTTCCTCTCCGGCGTCGGGCGCGATC GCGCCGGGACGGTGGCGGTGCTCGACCTGCCGCGCCTGGTGGAGACGGCCCGCGCGCGCGCCGTTCCGGCGGGGGGCCCG GCGGCGTGA
Upstream 100 bases:
>100_bases TCTCGCAGCAGATGAGGACCTTCACGCGTTCCCTCGGGACGGGAGAAATTAGCACCGATCTTGCCCGGCCGTCCCACCCT CGCGGATAATCCCGCGCCGA
Downstream 100 bases:
>100_bases CCGAGCCCAGCAGCGAGATCCTCCTGTTCCAGGTGGGCGCGCGCGTGTTCGCGGCCGTGGTGCACGACGCCGTGCGGATC GGCGCGGTGCGCGACGTCTC
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: Frizzy aggregation protein A [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MADPKPTDATGADAWYFCLRLLGARYAFEAPLVTEVVRLGPLTRLPAAPAFLPGVFTHRGEVLPVLDIGLLVGHGAVAIR ASTRAAIVHCGPWKVAVVTEGVEGLVAIPRRAIEPPPAESSGMAEFLSGVGRDRAGTVAVLDLPRLVETARARAVPAGGP AA
Sequences:
>Translated_162_residues MADPKPTDATGADAWYFCLRLLGARYAFEAPLVTEVVRLGPLTRLPAAPAFLPGVFTHRGEVLPVLDIGLLVGHGAVAIR ASTRAAIVHCGPWKVAVVTEGVEGLVAIPRRAIEPPPAESSGMAEFLSGVGRDRAGTVAVLDLPRLVETARARAVPAGGP AA >Mature_161_residues ADPKPTDATGADAWYFCLRLLGARYAFEAPLVTEVVRLGPLTRLPAAPAFLPGVFTHRGEVLPVLDIGLLVGHGAVAIRA STRAAIVHCGPWKVAVVTEGVEGLVAIPRRAIEPPPAESSGMAEFLSGVGRDRAGTVAVLDLPRLVETARARAVPAGGPA A
Specific function: Necessary for proper aggregation of cells to form fruiting bodies. FRZ genes define a system of signal transduction analogous to the enterobacterial chemotaxis systems [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 16774; Mature: 16642
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPKPTDATGADAWYFCLRLLGARYAFEAPLVTEVVRLGPLTRLPAAPAFLPGVFTHRG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCHHHHCCC EVLPVLDIGLLVGHGAVAIRASTRAAIVHCGPWKVAVVTEGVEGLVAIPRRAIEPPPAES CCCHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEEEECCCHHHHHCCHHHCCCCCCCC SGMAEFLSGVGRDRAGTVAVLDLPRLVETARARAVPAGGPAA CCHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADPKPTDATGADAWYFCLRLLGARYAFEAPLVTEVVRLGPLTRLPAAPAFLPGVFTHRG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCHHHHCCC EVLPVLDIGLLVGHGAVAIRASTRAAIVHCGPWKVAVVTEGVEGLVAIPRRAIEPPPAES CCCHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEEEECCCHHHHHCCHHHCCCCCCCC SGMAEFLSGVGRDRAGTVAVLDLPRLVETARARAVPAGGPAA CCHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2492105 [H]