Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is ypfH [C]

Identifier: 220915688

GI number: 220915688

Start: 647061

End: 647717

Strand: Direct

Name: ypfH [C]

Synonym: A2cp1_0569

Alternate gene names: 220915688

Gene position: 647061-647717 (Clockwise)

Preceding gene: 220915684

Following gene: 220915689

Centisome position: 12.87

GC content: 79.15

Gene sequence:

>657_bases
ATGACCTCCCGACCCGCGCTGCCGCTCGTCCACGTGGTGCGCCCGCCGCGCGTCCCGTCCGCGCACCCGCCGCTGCTGGT
GCTGCTGCACGGCATCGGCGCCGACGAGCGCGACCTGCTGCCGCTCGCCGCCCACCTCGATCCGCGCTTCCTCGTCGTGT
CGCTCCGCGCGCCGCACGAGGCCGAGCCCATGGGCTTCGCCTGGTACGCCATCGACTGGCGGACGTCACCGCCGCGCCAC
GACGCGGCGCAGGCGGCCGCCAGCGTCGACACCCTGGTGGCGTTCCTGGCGGGCGCGCCGGCCGCGCTCGGCACCGACCC
CGCGCGAACGTTCCTGTTCGGCTTCAGCCAGGGCGCGGCCATGTCGCTCGCGGCGGCCCTGGCGCGCCCGGACCTGGTGC
GCGGCGCGGTGCTCCACTCCGGCCGCCCGCTCCCGGGCCAGCCCGCGCCCGCGGGCGAGCTGGCCGGCCTGGAGGTGCTG
GTGCTGCACGGGCGCGCCGACCCGGTGCTGCCGCCGGAGCACGGCCGCGCCATCCGCGACCTGCTCGCCCCCGCGCTCGG
CCCGCGCCTCGTCCACCGCGAGCTCGACGGCGCGCACGAGGTCACCGCCGAGACGCTGGGCGAGGCGGCGCGCTGGCTCT
CGGCGCGCCTGGGATAG

Upstream 100 bases:

>100_bases
GCGGGTGCGGCGCGCCAAGGAACCACCTCCGGCGCGTGGGCGCAAGGGCGCGCACGGGCGAGGCGCGCCGCCAGGCGGCG
GGTTAGAACCGTCGCCGGCC

Downstream 100 bases:

>100_bases
GCTCGCGCCGTGCACCTGCGCGGCTCCATCACCGCCCTGGCGACCGGGCGAGCTGCACCACGTGCTCGTCTCGGCGGGCC
GCGCGCTCGGCTCCCGCGCC

Product: phospholipase/carboxylesterase

Products: alcohol; carboxylate

Alternate protein names: Phospholipase/Carboxylesterase Family Protein; Serine Esterase; Esterase; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Phospholipase / Carboxylesterase; Carboxylesterase; Phospholipase/Carboxylesterase Superfamily

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTSRPALPLVHVVRPPRVPSAHPPLLVLLHGIGADERDLLPLAAHLDPRFLVVSLRAPHEAEPMGFAWYAIDWRTSPPRH
DAAQAAASVDTLVAFLAGAPAALGTDPARTFLFGFSQGAAMSLAAALARPDLVRGAVLHSGRPLPGQPAPAGELAGLEVL
VLHGRADPVLPPEHGRAIRDLLAPALGPRLVHRELDGAHEVTAETLGEAARWLSARLG

Sequences:

>Translated_218_residues
MTSRPALPLVHVVRPPRVPSAHPPLLVLLHGIGADERDLLPLAAHLDPRFLVVSLRAPHEAEPMGFAWYAIDWRTSPPRH
DAAQAAASVDTLVAFLAGAPAALGTDPARTFLFGFSQGAAMSLAAALARPDLVRGAVLHSGRPLPGQPAPAGELAGLEVL
VLHGRADPVLPPEHGRAIRDLLAPALGPRLVHRELDGAHEVTAETLGEAARWLSARLG
>Mature_217_residues
TSRPALPLVHVVRPPRVPSAHPPLLVLLHGIGADERDLLPLAAHLDPRFLVVSLRAPHEAEPMGFAWYAIDWRTSPPRHD
AAQAAASVDTLVAFLAGAPAALGTDPARTFLFGFSQGAAMSLAAALARPDLVRGAVLHSGRPLPGQPAPAGELAGLEVLV
LHGRADPVLPPEHGRAIRDLLAPALGPRLVHRELDGAHEVTAETLGEAARWLSARLG

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.1

Molecular weight: Translated: 22926; Mature: 22795

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRPALPLVHVVRPPRVPSAHPPLLVLLHGIGADERDLLPLAAHLDPRFLVVSLRAPHE
CCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCC
AEPMGFAWYAIDWRTSPPRHDAAQAAASVDTLVAFLAGAPAALGTDPARTFLFGFSQGAA
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEECCCCHH
MSLAAALARPDLVRGAVLHSGRPLPGQPAPAGELAGLEVLVLHGRADPVLPPEHGRAIRD
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHH
LLAPALGPRLVHRELDGAHEVTAETLGEAARWLSARLG
HHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSRPALPLVHVVRPPRVPSAHPPLLVLLHGIGADERDLLPLAAHLDPRFLVVSLRAPHE
CCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCC
AEPMGFAWYAIDWRTSPPRHDAAQAAASVDTLVAFLAGAPAALGTDPARTFLFGFSQGAA
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEECCCCHH
MSLAAALARPDLVRGAVLHSGRPLPGQPAPAGELAGLEVLVLHGRADPVLPPEHGRAIRD
HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHH
LLAPALGPRLVHRELDGAHEVTAETLGEAARWLSARLG
HHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: carboxylic ester; H2O

Specific reaction: A carboxylic ester + H2O = an alcohol + a carboxylate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA