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The map label for this gene is suhR [H]

Identifier: 220915679

GI number: 220915679

Start: 637873

End: 639690

Strand: Reverse

Name: suhR [H]

Synonym: A2cp1_0560

Alternate gene names: 220915679

Gene position: 639690-637873 (Counterclockwise)

Preceding gene: 220915682

Following gene: 220915678

Centisome position: 12.72

GC content: 78.38

Gene sequence:

>1818_bases
ATGCAGACCGGAACGACCGAGGCCCAGGGGCTCCTGGAGTGCGACCTGGTGATGAAGGGCGGCATCACCAGCGGCGTCGT
GTACCCGCTCGCGCTGGTGGAGCTGGCGCGCCGGTACCGCTTCCGCTCGGTGGGCGGCTCGTCCGCAGGCGCCATCGCGG
CCGCCGCGGCGGTGGCGGCCGAGTACGGCCGCCAGACCGGCGCGACCGCGGACGGCGCCGGCTTCGCCGGCCTGGCGGCG
CTCCCGGCCAGCCTGGGCGAGCGGCTCCCGGACGGCCGCTCCCGGCTCGTCTCGCTGTTCCAGCCGTCGCGCCGCACCCG
GCCCGTGCTGGAGGCGCTGCTCGGCGCCGCGCGCGGCCGGAGCGCGGCCGGCAAGGTGGCGCGCGCGCTCGCGCCGCTCG
TCCTCGCGGCGCCCGGGTGCTGGGTGGCGCTCGCCGGGCTCCTGCTCGCCGGCGCGGTGGGCGCGCTCGCGGCGCGGCAG
GAGGGCGCCGCCGCCGCGATGGCGCTGGCGCTCTCGGCCGCCGCGGTGCTGGTGCTGGCCGCGCTCGGCGCGGTGGCGGC
GTCGGCCGCGTCGGCGCTCGGCGCCATCGCCGGCAACGGCCTGGGCGTGTGCAGCGGCTTCGCGCCGCCCGGCGGAGACC
GGCCGCCGCCGCTCACCCCGTGGCTGCACGGGCTCATCCAGCGGCTGGCGGGCACGCGCGAGGTGCTCACGCTCGGCGAC
CTCGAGCGCCACGGCCTGCGCCTCGAGGTCACCACCACCAGCGTCACGCACCAGCGCCCGTTCCGCCTGCCGCTCCACCC
CGACGACCCGGTGTTCTTCTTCCGCGAGATGGAGTTCCGGGCGCTGTTCCCGGCCGAGGTGGTCGACCGGCTGGTGGAGG
CCGGGCGCGCCGAGGAGGCGGAGCGCCGGGCGCGCACCGACGGCCGGCGCGTGCGGCTCCCCGCCCACGATCCGTCGATG
GTGCTGTTCCCTCGCGGGCCCGGCCTGCCGGTGGTGGTGCTCGCGCGCATGAGCCTCAGCTTCCCGCTGCTCCTCGGGGC
GGTGCCGCTGTACGGCGTGGACTGGACGCGCAAGCGGAACCAGCGGCGGCGCGCCGCGCCGGAGCTGGAGCGGGCCTGGT
TCTCCGACGGCGGGATCTGCTCGAACATCCCCATCCACTTCTTCGACGCCGCCCTGCCCACCCGCCCCACGTTCGCGATC
GACCTGCGCGAGCAGCACCCCGATCACCCGCTCGGCGCCTGGCTCCCCGCGAACAACGCCTCGGGCATCGCGCAGCGCTG
GCACCGCCTGGGCGAGGGGCGCGCCGCGCCGCTCCGGTTCCTGGCCGCGGTGGTGACCACCATGCAGACCTGGGTGGACG
AGATGCAGCTCGCCGCGCCGGGCTACCGCGACCGCATCGTGCACGTGTCGCACGCCGCGGACGAGGGCGGGCTGAACCTC
GAGATGCCGCCGGAGGTGATCGAGCGGCTCGCCGCGCGCGGCGCCGCCGCCGGCGAGCGGCTGCGCGACCGGTTCCGCTG
GGAGGACCACCGCTGGATCCGCTTCCGCTCGCTGCTCGACGTGATGCAGCGCTACGTCGCGCCGACCTGGACCGCGCACG
CGCCCGGCACGGCCGGGCGGGCCGCGCTGCTCGAGCTGCTCGAGGCGCACCGGGGCCGGCGCGGCAGCTACCCGGTGACC
GGGCCGCAGGCGGACTGCGCGCGCGCGGCGCTGGAGGGCGTGGACCGGCTGGTGGAGGCGACCGCGGCAACGGGCGGCGA
CCTGACCGAGCGGGCCCCCCGACCGGCCCCGGAGCTGCGGGCGCGCCCGCGCGTGTAG

Upstream 100 bases:

>100_bases
GGCGCCCGCGGACGGCGGACCCGCGCCTCGCGGTCGCCCGCTCGACAAGCCCCTCACGGATGGCAAAGTGGCCTCGCCGG
ACCAGCCGCGAGGGCACCGC

Downstream 100 bases:

>100_bases
CGGCCCGCCCCCGAGCCGCGCGAAACAGGGTAAGAGGAGGGCCGCAGGCCCACGCTCCCCGGGGACCCCGTGCTCGCAGC
GATCACCCACGACCTCCACA

Product: thermosensitive mutation transmembrane protein, SuhR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MQTGTTEAQGLLECDLVMKGGITSGVVYPLALVELARRYRFRSVGGSSAGAIAAAAAVAAEYGRQTGATADGAGFAGLAA
LPASLGERLPDGRSRLVSLFQPSRRTRPVLEALLGAARGRSAAGKVARALAPLVLAAPGCWVALAGLLLAGAVGALAARQ
EGAAAAMALALSAAAVLVLAALGAVAASAASALGAIAGNGLGVCSGFAPPGGDRPPPLTPWLHGLIQRLAGTREVLTLGD
LERHGLRLEVTTTSVTHQRPFRLPLHPDDPVFFFREMEFRALFPAEVVDRLVEAGRAEEAERRARTDGRRVRLPAHDPSM
VLFPRGPGLPVVVLARMSLSFPLLLGAVPLYGVDWTRKRNQRRRAAPELERAWFSDGGICSNIPIHFFDAALPTRPTFAI
DLREQHPDHPLGAWLPANNASGIAQRWHRLGEGRAAPLRFLAAVVTTMQTWVDEMQLAAPGYRDRIVHVSHAADEGGLNL
EMPPEVIERLAARGAAAGERLRDRFRWEDHRWIRFRSLLDVMQRYVAPTWTAHAPGTAGRAALLELLEAHRGRRGSYPVT
GPQADCARAALEGVDRLVEATAATGGDLTERAPRPAPELRARPRV

Sequences:

>Translated_605_residues
MQTGTTEAQGLLECDLVMKGGITSGVVYPLALVELARRYRFRSVGGSSAGAIAAAAAVAAEYGRQTGATADGAGFAGLAA
LPASLGERLPDGRSRLVSLFQPSRRTRPVLEALLGAARGRSAAGKVARALAPLVLAAPGCWVALAGLLLAGAVGALAARQ
EGAAAAMALALSAAAVLVLAALGAVAASAASALGAIAGNGLGVCSGFAPPGGDRPPPLTPWLHGLIQRLAGTREVLTLGD
LERHGLRLEVTTTSVTHQRPFRLPLHPDDPVFFFREMEFRALFPAEVVDRLVEAGRAEEAERRARTDGRRVRLPAHDPSM
VLFPRGPGLPVVVLARMSLSFPLLLGAVPLYGVDWTRKRNQRRRAAPELERAWFSDGGICSNIPIHFFDAALPTRPTFAI
DLREQHPDHPLGAWLPANNASGIAQRWHRLGEGRAAPLRFLAAVVTTMQTWVDEMQLAAPGYRDRIVHVSHAADEGGLNL
EMPPEVIERLAARGAAAGERLRDRFRWEDHRWIRFRSLLDVMQRYVAPTWTAHAPGTAGRAALLELLEAHRGRRGSYPVT
GPQADCARAALEGVDRLVEATAATGGDLTERAPRPAPELRARPRV
>Mature_605_residues
MQTGTTEAQGLLECDLVMKGGITSGVVYPLALVELARRYRFRSVGGSSAGAIAAAAAVAAEYGRQTGATADGAGFAGLAA
LPASLGERLPDGRSRLVSLFQPSRRTRPVLEALLGAARGRSAAGKVARALAPLVLAAPGCWVALAGLLLAGAVGALAARQ
EGAAAAMALALSAAAVLVLAALGAVAASAASALGAIAGNGLGVCSGFAPPGGDRPPPLTPWLHGLIQRLAGTREVLTLGD
LERHGLRLEVTTTSVTHQRPFRLPLHPDDPVFFFREMEFRALFPAEVVDRLVEAGRAEEAERRARTDGRRVRLPAHDPSM
VLFPRGPGLPVVVLARMSLSFPLLLGAVPLYGVDWTRKRNQRRRAAPELERAWFSDGGICSNIPIHFFDAALPTRPTFAI
DLREQHPDHPLGAWLPANNASGIAQRWHRLGEGRAAPLRFLAAVVTTMQTWVDEMQLAAPGYRDRIVHVSHAADEGGLNL
EMPPEVIERLAARGAAAGERLRDRFRWEDHRWIRFRSLLDVMQRYVAPTWTAHAPGTAGRAALLELLEAHRGRRGSYPVT
GPQADCARAALEGVDRLVEATAATGGDLTERAPRPAPELRARPRV

Specific function: This protein is non-essential for R.meliloti growth, but induces a heat-shock response in temperature-sensitive E.coli K165 by elevating levels of sigma 32 (mechanism unknown) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 64432; Mature: 64432

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGTTEAQGLLECDLVMKGGITSGVVYPLALVELARRYRFRSVGGSSAGAIAAAAAVAA
CCCCCCCCCCHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EYGRQTGATADGAGFAGLAALPASLGERLPDGRSRLVSLFQPSRRTRPVLEALLGAARGR
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
SAAGKVARALAPLVLAAPGCWVALAGLLLAGAVGALAARQEGAAAAMALALSAAAVLVLA
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALGAVAASAASALGAIAGNGLGVCSGFAPPGGDRPPPLTPWLHGLIQRLAGTREVLTLGD
HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCC
LERHGLRLEVTTTSVTHQRPFRLPLHPDDPVFFFREMEFRALFPAEVVDRLVEAGRAEEA
HHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHCCCHHHH
ERRARTDGRRVRLPAHDPSMVLFPRGPGLPVVVLARMSLSFPLLLGAVPLYGVDWTRKRN
HHHHHCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
QRRRAAPELERAWFSDGGICSNIPIHFFDAALPTRPTFAIDLREQHPDHPLGAWLPANNA
HHHHCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEEHHCCCCCCCCCEECCCCC
SGIAQRWHRLGEGRAAPLRFLAAVVTTMQTWVDEMQLAAPGYRDRIVHVSHAADEGGLNL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEEEECCCCCCCCC
EMPPEVIERLAARGAAAGERLRDRFRWEDHRWIRFRSLLDVMQRYVAPTWTAHAPGTAGR
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AALLELLEAHRGRRGSYPVTGPQADCARAALEGVDRLVEATAATGGDLTERAPRPAPELR
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCC
ARPRV
CCCCC
>Mature Secondary Structure
MQTGTTEAQGLLECDLVMKGGITSGVVYPLALVELARRYRFRSVGGSSAGAIAAAAAVAA
CCCCCCCCCCHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EYGRQTGATADGAGFAGLAALPASLGERLPDGRSRLVSLFQPSRRTRPVLEALLGAARGR
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
SAAGKVARALAPLVLAAPGCWVALAGLLLAGAVGALAARQEGAAAAMALALSAAAVLVLA
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALGAVAASAASALGAIAGNGLGVCSGFAPPGGDRPPPLTPWLHGLIQRLAGTREVLTLGD
HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCC
LERHGLRLEVTTTSVTHQRPFRLPLHPDDPVFFFREMEFRALFPAEVVDRLVEAGRAEEA
HHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHCCCHHHH
ERRARTDGRRVRLPAHDPSMVLFPRGPGLPVVVLARMSLSFPLLLGAVPLYGVDWTRKRN
HHHHHCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
QRRRAAPELERAWFSDGGICSNIPIHFFDAALPTRPTFAIDLREQHPDHPLGAWLPANNA
HHHHCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEEHHCCCCCCCCCEECCCCC
SGIAQRWHRLGEGRAAPLRFLAAVVTTMQTWVDEMQLAAPGYRDRIVHVSHAADEGGLNL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEEEECCCCCCCCC
EMPPEVIERLAARGAAAGERLRDRFRWEDHRWIRFRSLLDVMQRYVAPTWTAHAPGTAGR
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AALLELLEAHRGRRGSYPVTGPQADCARAALEGVDRLVEATAATGGDLTERAPRPAPELR
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCC
ARPRV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430; 2113906 [H]