| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is nikE [C]
Identifier: 220915640
GI number: 220915640
Start: 601844
End: 602620
Strand: Reverse
Name: nikE [C]
Synonym: A2cp1_0521
Alternate gene names: 220915640
Gene position: 602620-601844 (Counterclockwise)
Preceding gene: 220915641
Following gene: 220915635
Centisome position: 11.98
GC content: 75.68
Gene sequence:
>777_bases GTGGACGTCGGGCGGATGGAGCTGCGCGGGCGGCCGGTGCTGCGCGAGCTCCGGTTCTCGGTGGCCGCGGGCGAGCGGGT GGTGCTGCTCGGCGTGAACGGCTGCGGCAAGACCACGCTGCTGAAGCTCATGGACGGGCTCGCGTTCCCGCAGGAGGGCG CGGTGCGCTGGCGCGGGCGCGCGCTCGACGCTCCCGCGCTCGCCGGGGCGGCGTTCCGGCGCGCCTTCCGCGGCGAGGTG GCGCTCCTGTTCCAGAACGTGGACGCGATGCTGTTCAACCCGTCGGTCGCCGACGAGATCGCGTTCGGGCCGCGGCAGCT CGGCGTCGCGGAGCCGGAGGTCGAGGCGCGGGTGGCCCGCTGGGCGGGCGCGTTCGAGCTCACCGCGCTGCTGGAGCGGC CGCCGTTCGAGCTGTCCGGCGGCGAGAAGAAGCGGGTGGCGATGGCGGCGCTCATGGCGGTCGGACCGAAGGTGCTGCTG CTCGACGAGCCCACCGCCGGCCTGGATCCCGCGAGCGCGGGGCGGCTGGTGGACTTCCTGGCCGGGCTGGAGCGGGTGAC CGTGGTCACCTCCACGCACCACCTGACGCTGGCGGAGGAGCTGGGCACGCGGGCGGTGCTGCTCGGGCCGGATCGCCCCG GCGTCCTGTTCGACGGCCCCACCGCCGCGCTGCTCGGCGACGAGCGGGCCCTGGTGGAGAGCGGGCTCGCGCACCGGCAC GTCCACGCGCACGGCGTGGAGGTGCACGCGCACTTCCACGTGCACGACACCGAGTAG
Upstream 100 bases:
>100_bases CGAGCGGCATCACCGCCGCGCTGCTGGTGCTCGCGGTCCGGAACGCGCGCGAGGTGTCCGACGCCATGCGGTCCCGGGGG TTCTAGCCGTGGAATTCGAG
Downstream 100 bases:
>100_bases CCGCGGGCGCGCGCCCGCGGGGATCAGCGGATGGGGATCACCACGGCGCCTGCCGGCTGCACGGGGCGGACGTGATCGGC GAGGCGGCGGTCGGAGCCCG
Product: ABC transporter-like protein
Products: Ni2; [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MDVGRMELRGRPVLRELRFSVAAGERVVLLGVNGCGKTTLLKLMDGLAFPQEGAVRWRGRALDAPALAGAAFRRAFRGEV ALLFQNVDAMLFNPSVADEIAFGPRQLGVAEPEVEARVARWAGAFELTALLERPPFELSGGEKKRVAMAALMAVGPKVLL LDEPTAGLDPASAGRLVDFLAGLERVTVVTSTHHLTLAEELGTRAVLLGPDRPGVLFDGPTAALLGDERALVESGLAHRH VHAHGVEVHAHFHVHDTE
Sequences:
>Translated_258_residues MDVGRMELRGRPVLRELRFSVAAGERVVLLGVNGCGKTTLLKLMDGLAFPQEGAVRWRGRALDAPALAGAAFRRAFRGEV ALLFQNVDAMLFNPSVADEIAFGPRQLGVAEPEVEARVARWAGAFELTALLERPPFELSGGEKKRVAMAALMAVGPKVLL LDEPTAGLDPASAGRLVDFLAGLERVTVVTSTHHLTLAEELGTRAVLLGPDRPGVLFDGPTAALLGDERALVESGLAHRH VHAHGVEVHAHFHVHDTE >Mature_258_residues MDVGRMELRGRPVLRELRFSVAAGERVVLLGVNGCGKTTLLKLMDGLAFPQEGAVRWRGRALDAPALAGAAFRRAFRGEV ALLFQNVDAMLFNPSVADEIAFGPRQLGVAEPEVEARVARWAGAFELTALLERPPFELSGGEKKRVAMAALMAVGPKVLL LDEPTAGLDPASAGRLVDFLAGLERVTVVTSTHHLTLAEELGTRAVLLGPDRPGVLFDGPTAALLGDERALVESGLAHRH VHAHGVEVHAHFHVHDTE
Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]
COG id: COG1122
COG function: function code P; ABC-type cobalt transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=213, Percent_Identity=28.169014084507, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI21536376, Length=193, Percent_Identity=30.5699481865285, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI255708477, Length=171, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI148612844, Length=171, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI42741659, Length=172, Percent_Identity=31.3953488372093, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI27477115, Length=196, Percent_Identity=30.6122448979592, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=28.3653846153846, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4505771, Length=172, Percent_Identity=30.2325581395349, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI9961252, Length=172, Percent_Identity=30.2325581395349, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI9955963, Length=195, Percent_Identity=31.7948717948718, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI42490749, Length=175, Percent_Identity=32.5714285714286, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI9961250, Length=194, Percent_Identity=29.3814432989691, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27881501, Length=197, Percent_Identity=25.8883248730964, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI30795238, Length=197, Percent_Identity=25.8883248730964, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27436953, Length=202, Percent_Identity=27.2277227722772, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27262624, Length=198, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27262626, Length=198, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI47078218, Length=203, Percent_Identity=28.0788177339901, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI45446740, Length=203, Percent_Identity=28.0788177339901, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI150417984, Length=204, Percent_Identity=31.8627450980392, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI153792144, Length=201, Percent_Identity=25.8706467661692, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI6005701, Length=201, Percent_Identity=26.865671641791, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9955968, Length=203, Percent_Identity=30.0492610837438, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI171184400, Length=211, Percent_Identity=29.8578199052133, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI9955966, Length=203, Percent_Identity=30.0492610837438, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI45243524, Length=203, Percent_Identity=30.0492610837438, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789891, Length=202, Percent_Identity=33.1683168316832, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=32.15859030837, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787089, Length=198, Percent_Identity=30.8080808080808, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=34.8039215686275, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI87081709, Length=181, Percent_Identity=30.939226519337, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=31.4159292035398, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=29.7297297297297, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=32.2274881516588, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082267, Length=200, Percent_Identity=33.5, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1789032, Length=198, Percent_Identity=29.2929292929293, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787370, Length=202, Percent_Identity=30.6930693069307, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790162, Length=197, Percent_Identity=30.9644670050761, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=30.8056872037915, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790467, Length=204, Percent_Identity=32.3529411764706, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994997, Length=203, Percent_Identity=31.5270935960591, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786398, Length=191, Percent_Identity=30.3664921465969, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87081834, Length=193, Percent_Identity=32.1243523316062, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789672, Length=199, Percent_Identity=26.6331658291457, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI48994943, Length=186, Percent_Identity=29.5698924731183, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788450, Length=200, Percent_Identity=30, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786698, Length=161, Percent_Identity=34.1614906832298, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=30.4147465437788, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788644, Length=227, Percent_Identity=26.8722466960352, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787500, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787143, Length=245, Percent_Identity=30.2040816326531, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1786872, Length=204, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87081782, Length=209, Percent_Identity=30.1435406698565, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI145693107, Length=212, Percent_Identity=29.7169811320755, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789586, Length=221, Percent_Identity=28.0542986425339, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786703, Length=191, Percent_Identity=34.0314136125654, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=196, Percent_Identity=23.469387755102, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787712, Length=199, Percent_Identity=29.1457286432161, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=200, Percent_Identity=29.5, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786319, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787164, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790534, Length=176, Percent_Identity=31.25, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI2367384, Length=160, Percent_Identity=30, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1789593, Length=168, Percent_Identity=30.3571428571429, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786345, Length=205, Percent_Identity=32.6829268292683, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789864, Length=225, Percent_Identity=24.4444444444444, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=30.6930693069307, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193211017, Length=248, Percent_Identity=28.2258064516129, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193211015, Length=248, Percent_Identity=28.2258064516129, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71996809, Length=252, Percent_Identity=27.3809523809524, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533608, Length=201, Percent_Identity=25.8706467661692, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI212646699, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193209708, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71992290, Length=217, Percent_Identity=28.110599078341, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567265, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558664, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115535101, Length=201, Percent_Identity=31.8407960199005, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17541710, Length=169, Percent_Identity=31.9526627218935, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71992285, Length=168, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17565938, Length=204, Percent_Identity=27.9411764705882, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25146777, Length=168, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17543740, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71984940, Length=166, Percent_Identity=28.9156626506024, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24666092, Length=206, Percent_Identity=29.6116504854369, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24643674, Length=198, Percent_Identity=30.8080808080808, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24653245, Length=182, Percent_Identity=31.3186813186813, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582014, Length=226, Percent_Identity=31.4159292035398, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582012, Length=226, Percent_Identity=31.4159292035398, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281363262, Length=182, Percent_Identity=31.3186813186813, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI17136662, Length=195, Percent_Identity=33.8461538461538, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24659289, Length=165, Percent_Identity=29.6969696969697, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85726357, Length=198, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574744, Length=198, Percent_Identity=30.3030303030303, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI221512771, Length=186, Percent_Identity=30.1075268817204, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24648314, Length=200, Percent_Identity=27, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45551501, Length=185, Percent_Identity=30.8108108108108, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI45551502, Length=185, Percent_Identity=30.8108108108108, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357851, Length=185, Percent_Identity=30.8108108108108, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27612; Mature: 27612
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVGRMELRGRPVLRELRFSVAAGERVVLLGVNGCGKTTLLKLMDGLAFPQEGAVRWRGR CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCC ALDAPALAGAAFRRAFRGEVALLFQNVDAMLFNPSVADEIAFGPRQLGVAEPEVEARVAR CCCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCHHHHHCCCCHHCCCCCCHHHHHHHH WAGAFELTALLERPPFELSGGEKKRVAMAALMAVGPKVLLLDEPTAGLDPASAGRLVDFL HCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH AGLERVTVVTSTHHLTLAEELGTRAVLLGPDRPGVLFDGPTAALLGDERALVESGLAHRH HCHHEEEEEECCCEEEEHHHHCCEEEEECCCCCCEEECCCCEEEECCCHHHHHCCCHHCE VHAHGVEVHAHFHVHDTE EEECCEEEEEEEEEECCC >Mature Secondary Structure MDVGRMELRGRPVLRELRFSVAAGERVVLLGVNGCGKTTLLKLMDGLAFPQEGAVRWRGR CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCC ALDAPALAGAAFRRAFRGEVALLFQNVDAMLFNPSVADEIAFGPRQLGVAEPEVEARVAR CCCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCHHHHHCCCCHHCCCCCCHHHHHHHH WAGAFELTALLERPPFELSGGEKKRVAMAALMAVGPKVLLLDEPTAGLDPASAGRLVDFL HCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH AGLERVTVVTSTHHLTLAEELGTRAVLLGPDRPGVLFDGPTAALLGDERALVESGLAHRH HCHHEEEEEECCCEEEEHHHHCCEEEEECCCCCCEEECCCCEEEECCCHHHHHCCCHHCE VHAHGVEVHAHFHVHDTE EEECCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; ATP; H2O [C]
Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]