Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915463
Identifier: 220915463
GI number: 220915463
Start: 382956
End: 383726
Strand: Reverse
Name: 220915463
Synonym: A2cp1_0342
Alternate gene names: NA
Gene position: 383726-382956 (Counterclockwise)
Preceding gene: 220915466
Following gene: 220915458
Centisome position: 7.63
GC content: 78.6
Gene sequence:
>771_bases ATGACCGCCTCCGACGGACCGCTGCTCACGCTGCTGCTGCCGGGCCTGGACGGCACCGGCCGGCTCCTCGATCGGTTCGT GGCCGCCGCGAGCGGCCGGCTCGAGCTGCGCGCGCTCTCGTACCCGCCGGACCGGGCGCTCTCGTACGCGGAGCTCGCCG AGCTCGTGCGCGCCGAGCTTCCGCGCGGGCGGCGCTTCGCGCTCGTGGGCGAGTCCTTCGGCGGGCCGCTCGCGCTGCGC GTCGCGGCCGGGCGGCCTCCGGGGCTGGTCGGGGTGGTGCTGGCGGCGAGCTTCCACCGCCGGCCGGCGGCGCGGCTGGT GTCGGCGCTCCGGCCGCTCTCGCCCGCGTTCTTCCGGCTGCCGCTGCCGGCGCACGCGGTGCGGGTGCTGCTCGCCGGGC ACGACGCGCCGGATGCGCTGGTGGCGGACGTGCAGGCCGCGGTCGCTTCGGTCCGGCCGCGCGTGATGGCGCGCCGCGCG CACGAGGCGCTGCACGTGGACGCGACCGGCTGGCTCCGCGACTGCCCGGCGCCGGTGCTGTTCCTGGGCGGGCGGCAGGA CCGGCTGCTCCGCACCGGCCTCGCCATCGAGATCCGCCTGGTACGGCCCGACGCCGAGATCCGCATGCTCGACGCGCCGC ACCTCGTGCTGCAGCGGCGGCCCGCCGAGGCGATGCGCGCCGTGGAGGCGTTCCTCGGGCGCTCGCCGGCGGCCACCGCG CCGATGCGCGCGGCGCCCGCCGACGAGCCGGAGATCTCCGCTAGAAGATGA
Upstream 100 bases:
>100_bases GTCCGGCGGAGCCCGCGGTGGCCGCCCAGGACGGCCTGCGTCTGACCTATGACGAGCGTCAGACGCGCCGCGTCAGGCCA CCGTGTCACCGTGTCACACC
Downstream 100 bases:
>100_bases CCTGCGCGAACAGCGTGGTGCGGTCGCCGGTGCGACCCGCCGCGCCGGTCTGCCCCTGGTCGAGCTCGTGGTTGAGGATG AGCCGGGCGTTCACCGGGAT
Product: BioH protein
Products: NA
Alternate protein names: Bioh Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTASDGPLLTLLLPGLDGTGRLLDRFVAAASGRLELRALSYPPDRALSYAELAELVRAELPRGRRFALVGESFGGPLALR VAAGRPPGLVGVVLAASFHRRPAARLVSALRPLSPAFFRLPLPAHAVRVLLAGHDAPDALVADVQAAVASVRPRVMARRA HEALHVDATGWLRDCPAPVLFLGGRQDRLLRTGLAIEIRLVRPDAEIRMLDAPHLVLQRRPAEAMRAVEAFLGRSPAATA PMRAAPADEPEISARR
Sequences:
>Translated_256_residues MTASDGPLLTLLLPGLDGTGRLLDRFVAAASGRLELRALSYPPDRALSYAELAELVRAELPRGRRFALVGESFGGPLALR VAAGRPPGLVGVVLAASFHRRPAARLVSALRPLSPAFFRLPLPAHAVRVLLAGHDAPDALVADVQAAVASVRPRVMARRA HEALHVDATGWLRDCPAPVLFLGGRQDRLLRTGLAIEIRLVRPDAEIRMLDAPHLVLQRRPAEAMRAVEAFLGRSPAATA PMRAAPADEPEISARR >Mature_255_residues TASDGPLLTLLLPGLDGTGRLLDRFVAAASGRLELRALSYPPDRALSYAELAELVRAELPRGRRFALVGESFGGPLALRV AAGRPPGLVGVVLAASFHRRPAARLVSALRPLSPAFFRLPLPAHAVRVLLAGHDAPDALVADVQAAVASVRPRVMARRAH EALHVDATGWLRDCPAPVLFLGGRQDRLLRTGLAIEIRLVRPDAEIRMLDAPHLVLQRRPAEAMRAVEAFLGRSPAATAP MRAAPADEPEISARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27411; Mature: 27280
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASDGPLLTLLLPGLDGTGRLLDRFVAAASGRLELRALSYPPDRALSYAELAELVRAEL CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHHHHHHHHHC PRGRRFALVGESFGGPLALRVAAGRPPGLVGVVLAASFHRRPAARLVSALRPLSPAFFRL CCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEC PLPAHAVRVLLAGHDAPDALVADVQAAVASVRPRVMARRAHEALHVDATGWLRDCPAPVL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCCEE FLGGRQDRLLRTGLAIEIRLVRPDAEIRMLDAPHLVLQRRPAEAMRAVEAFLGRSPAATA EECCCHHHHHHCCCEEEEEEECCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCCC PMRAAPADEPEISARR CCCCCCCCCCCCCCCC >Mature Secondary Structure TASDGPLLTLLLPGLDGTGRLLDRFVAAASGRLELRALSYPPDRALSYAELAELVRAEL CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHHHHHHHHHC PRGRRFALVGESFGGPLALRVAAGRPPGLVGVVLAASFHRRPAARLVSALRPLSPAFFRL CCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEC PLPAHAVRVLLAGHDAPDALVADVQAAVASVRPRVMARRAHEALHVDATGWLRDCPAPVL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCCEE FLGGRQDRLLRTGLAIEIRLVRPDAEIRMLDAPHLVLQRRPAEAMRAVEAFLGRSPAATA EECCCHHHHHHCCCEEEEEEECCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCCC PMRAAPADEPEISARR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA