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The map label for this gene is oxyR [H]

Identifier: 220915455

GI number: 220915455

Start: 374465

End: 375436

Strand: Reverse

Name: oxyR [H]

Synonym: A2cp1_0334

Alternate gene names: 220915455

Gene position: 375436-374465 (Counterclockwise)

Preceding gene: 220915458

Following gene: 220915452

Centisome position: 7.46

GC content: 77.98

Gene sequence:

>972_bases
ATGGCTATCACTCGCCTGCCCCCGCACCCGTTCTCGCTGCGCCAGCTGCAGTACGCGGTCGCCGTCGCGGAGACGCTCTC
CTTCCGCCGCGCGGCCGAGCGCTGCCGCGTGGCCCAGCCCTCGCTCTCCACGCAGATCGCGCAGCTCGAGTCGGCGCTCG
GCCTCCGCCTGTTCGAGCGCGACCGGCGGCGCGTGCTCGTCACCGGGGCGGGGCGGCCGCTGCTCGAGCAGATGCGCCGC
CTGCTGCTCCAGGCGGACGACCTGCTGGAGGCTGCGCGCCGGGCCGGGGATCCGCTCGCGGGGGCGCTGCGCGTCGGGGT
CATCCCGACCATCTCGCCCTATCTCCTGCCCGCCATCGCGCCCGCGCTCCGCGCGGCCTACCCCGCGCTGCACCTCACCT
GGCTCGAGGATCGCACCGCCGAGCTGGTCCGGAGCCTCCACGCCGGCACGCTCGACGCGGCGCTGCTCGCGGTGGAGGCG
GAGCTCGGCGACGTGGAGGTGGCGCCGGTGGCGCGCGACGCGTTCGTGCTCGCGACGCCCCCCGGGCACCCGCTCGGCGT
GGCGCGAGAGCCGGCCTCCGCCGCCGAGCTGCGCGACGCGAGCGTGCTGCTGCTCGAGGACGGGCACTGCCTGCGCGAGC
AGGCGCTGGCGTTCTGCTCTCGCGCGCGCACTCGCGAGCTGGAGTTCCGGGCGACCAGCCTCTCGACGCTCGCGCAGATG
GTCGCGGGCGGCGCCGGCGTGACGCTCCTGCCCGAGCTGGCGGTCCCCACCGAGACGCGACGCGCGGACCTCCGCCTGCG
CCCGTTCGCCGACCCGGCGCCGTTCCGGACCGTCGCGCTGGTGTGGCGCCGCAGCTCGCCCATCGCCGAGGCGCTGCGGC
GGCTCGCCGGCACCGTGAAGGCGGCGTACCCGGCGCCCGCGGGCCGGGCGGCGGGATCCGAGCGTCAGCGGCCGCGCGCG
CCGCGGGCGTGA

Upstream 100 bases:

>100_bases
CGAATCGGTTCGGGCGCGGCGTCCATCGCCGCGACGGGACACAACATGCCCGCGGGCTTCTGATTGAGCCATTACATCGT
TTCGATTACGTTGTTAGTCC

Downstream 100 bases:

>100_bases
GGTCCGGGCCGGCGTCCGGCGCCTCCGTCGCGGGACGGTGAGCCGGGCCTGCGTGCGCCGCCGCCCTGGGCCGGCGCGGT
CGCGAGGAACACCACGTGCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAITRLPPHPFSLRQLQYAVAVAETLSFRRAAERCRVAQPSLSTQIAQLESALGLRLFERDRRRVLVTGAGRPLLEQMRR
LLLQADDLLEAARRAGDPLAGALRVGVIPTISPYLLPAIAPALRAAYPALHLTWLEDRTAELVRSLHAGTLDAALLAVEA
ELGDVEVAPVARDAFVLATPPGHPLGVAREPASAAELRDASVLLLEDGHCLREQALAFCSRARTRELEFRATSLSTLAQM
VAGGAGVTLLPELAVPTETRRADLRLRPFADPAPFRTVALVWRRSSPIAEALRRLAGTVKAAYPAPAGRAAGSERQRPRA
PRA

Sequences:

>Translated_323_residues
MAITRLPPHPFSLRQLQYAVAVAETLSFRRAAERCRVAQPSLSTQIAQLESALGLRLFERDRRRVLVTGAGRPLLEQMRR
LLLQADDLLEAARRAGDPLAGALRVGVIPTISPYLLPAIAPALRAAYPALHLTWLEDRTAELVRSLHAGTLDAALLAVEA
ELGDVEVAPVARDAFVLATPPGHPLGVAREPASAAELRDASVLLLEDGHCLREQALAFCSRARTRELEFRATSLSTLAQM
VAGGAGVTLLPELAVPTETRRADLRLRPFADPAPFRTVALVWRRSSPIAEALRRLAGTVKAAYPAPAGRAAGSERQRPRA
PRA
>Mature_322_residues
AITRLPPHPFSLRQLQYAVAVAETLSFRRAAERCRVAQPSLSTQIAQLESALGLRLFERDRRRVLVTGAGRPLLEQMRRL
LLQADDLLEAARRAGDPLAGALRVGVIPTISPYLLPAIAPALRAAYPALHLTWLEDRTAELVRSLHAGTLDAALLAVEAE
LGDVEVAPVARDAFVLATPPGHPLGVAREPASAAELRDASVLLLEDGHCLREQALAFCSRARTRELEFRATSLSTLAQMV
AGGAGVTLLPELAVPTETRRADLRLRPFADPAPFRTVALVWRRSSPIAEALRRLAGTVKAAYPAPAGRAAGSERQRPRAP
RA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=292, Percent_Identity=43.4931506849315, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1787879, Length=293, Percent_Identity=33.7883959044369, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI157672245, Length=274, Percent_Identity=29.9270072992701, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1788887, Length=293, Percent_Identity=27.6450511945392, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI145693105, Length=286, Percent_Identity=26.9230769230769, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1788748, Length=248, Percent_Identity=30.241935483871, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI2367136, Length=254, Percent_Identity=30.7086614173228, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788297, Length=249, Percent_Identity=29.3172690763052, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082132, Length=305, Percent_Identity=25.2459016393443, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787806, Length=287, Percent_Identity=25.0871080139373, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789204, Length=309, Percent_Identity=25.2427184466019, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787601, Length=277, Percent_Identity=24.9097472924188, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788481, Length=286, Percent_Identity=24.8251748251748, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787530, Length=265, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789173, Length=127, Percent_Identity=36.2204724409449, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34875; Mature: 34744

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITRLPPHPFSLRQLQYAVAVAETLSFRRAAERCRVAQPSLSTQIAQLESALGLRLFER
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
DRRRVLVTGAGRPLLEQMRRLLLQADDLLEAARRAGDPLAGALRVGVIPTISPYLLPAIA
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH
PALRAAYPALHLTWLEDRTAELVRSLHAGTLDAALLAVEAELGDVEVAPVARDAFVLATP
HHHHHHCCHHEEEEHHHHHHHHHHHHHCCCHHHHHHHEECCCCCEEECEECCCEEEEECC
PGHPLGVAREPASAAELRDASVLLLEDGHCLREQALAFCSRARTRELEFRATSLSTLAQM
CCCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGGAGVTLLPELAVPTETRRADLRLRPFADPAPFRTVALVWRRSSPIAEALRRLAGTVK
HHCCCCCEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
AAYPAPAGRAAGSERQRPRAPRA
HCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AITRLPPHPFSLRQLQYAVAVAETLSFRRAAERCRVAQPSLSTQIAQLESALGLRLFER
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
DRRRVLVTGAGRPLLEQMRRLLLQADDLLEAARRAGDPLAGALRVGVIPTISPYLLPAIA
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH
PALRAAYPALHLTWLEDRTAELVRSLHAGTLDAALLAVEAELGDVEVAPVARDAFVLATP
HHHHHHCCHHEEEEHHHHHHHHHHHHHCCCHHHHHHHEECCCCCEEECEECCCEEEEECC
PGHPLGVAREPASAAELRDASVLLLEDGHCLREQALAFCSRARTRELEFRATSLSTLAQM
CCCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGGAGVTLLPELAVPTETRRADLRLRPFADPAPFRTVALVWRRSSPIAEALRRLAGTVK
HHCCCCCEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
AAYPAPAGRAAGSERQRPRAPRA
HCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA