Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is cenB [H]
Identifier: 220915447
GI number: 220915447
Start: 367333
End: 368028
Strand: Reverse
Name: cenB [H]
Synonym: A2cp1_0326
Alternate gene names: 220915447
Gene position: 368028-367333 (Counterclockwise)
Preceding gene: 220915449
Following gene: 220915443
Centisome position: 7.32
GC content: 81.61
Gene sequence:
>696_bases ATGTTCGGCTCGCGTGTCGCCGTCCTCGCGTCCGTGCTCGCCGCCGCGCTCGCCTGCGAGCGCGCCGCGCCGCGGCCCGG CCCATCGCCGGCCTCGGTGGCGCCCGCCGCCGCGCCGCGCGCGCCCGACCCGCCCCGCGACCTCGACGCACGCGCCGTCA CCGACCGTCACGTGGTGCTGCGCTGGAAGCCGGGCGCCGGCGCGACGGATGGCGCCGCGTACGAGGTGCTGGTGGGCGAC CGCGTGCTCCACGCGGAGGCGCCGCCGCTCGACGACCGCCAGGTGGGCCCCGCCCGCGCCTACTGCTACGCCGTTCGCGC GGTGGACGCCGCCGGGAACCGCTCGCCGGCGTCGCCGGCGGCGTGCGTGCGGACGCCGGACCTGGTCGCGCCCACCCCTC CCGGCGCGCCCGGCGCGAGCGCCCTGGGAACGGAGAGCGCGATGGTCTCCTGGTCGCCGTCGCACGACGACGTGGCGGTC GCGGGCTACGAGCTCCTGCGCGACGGGCACGTGGTGGCGCGCGCGGGCGCCGCCGCGACGGACGCGGTGGAGGCGGGGCT CGTGCCGGGGCGGGAGCACTGCTGGTCCGTCCGCGCCCGCGACGCCGCCGGCAATGCGTCGGCCGCGGCGGGCCCGGTGT GCGCGCGCACCTCGGACGCGTCGCGGGCCGGCCGGCTCGGCGCGCCCCGGCCGTAG
Upstream 100 bases:
>100_bases GGGCGGTCCGAAGGTGGCGTGCTAACCTGCCGGCCGGTGCGCGGTGGCCTCGCCGCGCAGCGGTGCTCCCGGCTCCGGGG CGCCGCACTGGGGGGAGGCA
Downstream 100 bases:
>100_bases CGGCCGGACCGGCGCCGCCTACCAGATCAGCGCCAGCGCCACCGCGCCGACCACGGCGAACGCGAGCGCCACCTTCACGG CGCTCCCCAGCACGAACCCG
Product: Fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Cellulase B; Endo-1,4-beta-glucanase B [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MFGSRVAVLASVLAAALACERAAPRPGPSPASVAPAAAPRAPDPPRDLDARAVTDRHVVLRWKPGAGATDGAAYEVLVGD RVLHAEAPPLDDRQVGPARAYCYAVRAVDAAGNRSPASPAACVRTPDLVAPTPPGAPGASALGTESAMVSWSPSHDDVAV AGYELLRDGHVVARAGAAATDAVEAGLVPGREHCWSVRARDAAGNASAAAGPVCARTSDASRAGRLGAPRP
Sequences:
>Translated_231_residues MFGSRVAVLASVLAAALACERAAPRPGPSPASVAPAAAPRAPDPPRDLDARAVTDRHVVLRWKPGAGATDGAAYEVLVGD RVLHAEAPPLDDRQVGPARAYCYAVRAVDAAGNRSPASPAACVRTPDLVAPTPPGAPGASALGTESAMVSWSPSHDDVAV AGYELLRDGHVVARAGAAATDAVEAGLVPGREHCWSVRARDAAGNASAAAGPVCARTSDASRAGRLGAPRP >Mature_231_residues MFGSRVAVLASVLAAALACERAAPRPGPSPASVAPAAAPRAPDPPRDLDARAVTDRHVVLRWKPGAGATDGAAYEVLVGD RVLHAEAPPLDDRQVGPARAYCYAVRAVDAAGNRSPASPAACVRTPDLVAPTPPGAPGASALGTESAMVSWSPSHDDVAV AGYELLRDGHVVARAGAAATDAVEAGLVPGREHCWSVRARDAAGNASAAAGPVCARTSDASRAGRLGAPRP
Specific function: The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes:(1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing e
COG id: COG3979
COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 fibronectin type-III domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR008965 - InterPro: IPR001956 - InterPro: IPR012291 - InterPro: IPR018366 - InterPro: IPR001919 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001701 - InterPro: IPR018221 - InterPro: IPR013783 [H]
Pfam domain/function: PF00553 CBM_2; PF00942 CBM_3; PF00041 fn3; PF00759 Glyco_hydro_9 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 23189; Mature: 23189
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGSRVAVLASVLAAALACERAAPRPGPSPASVAPAAAPRAPDPPRDLDARAVTDRHVVL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEE RWKPGAGATDGAAYEVLVGDRVLHAEAPPLDDRQVGPARAYCYAVRAVDAAGNRSPASPA EECCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC ACVRTPDLVAPTPPGAPGASALGTESAMVSWSPSHDDVAVAGYELLRDGHVVARAGAAAT HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHCCCEEEECCCCHH DAVEAGLVPGREHCWSVRARDAAGNASAAAGPVCARTSDASRAGRLGAPRP HHHHHCCCCCHHHHHEECCCCCCCCCCCCCCCEEECCCCCHHCCCCCCCCC >Mature Secondary Structure MFGSRVAVLASVLAAALACERAAPRPGPSPASVAPAAAPRAPDPPRDLDARAVTDRHVVL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEE RWKPGAGATDGAAYEVLVGDRVLHAEAPPLDDRQVGPARAYCYAVRAVDAAGNRSPASPA EECCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC ACVRTPDLVAPTPPGAPGASALGTESAMVSWSPSHDDVAVAGYELLRDGHVVARAGAAAT HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHCCCEEEECCCCHH DAVEAGLVPGREHCWSVRARDAAGNASAAAGPVCARTSDASRAGRLGAPRP HHHHHCCCCCHHHHHEECCCCCCCCCCCCCCCEEECCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1987122; 1938913 [H]