Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is pqqL [C]
Identifier: 220915441
GI number: 220915441
Start: 358873
End: 361587
Strand: Reverse
Name: pqqL [C]
Synonym: A2cp1_0320
Alternate gene names: 220915441
Gene position: 361587-358873 (Counterclockwise)
Preceding gene: 220915443
Following gene: 220915437
Centisome position: 7.19
GC content: 78.01
Gene sequence:
>2715_bases ATGCTCGCGCCGCTCGTCCCGCTCGTCCCGCTCGCCGCCCTCGCCCTCGCCGCCGCCCCCGCCGCGCCGCCGCTCGAGCT CACCAGCTTCTCGCTGCCGAACGGCCTGACCGTGGTGCTCGCGCCCGACCACCGGCTGCCGCAGGTGGCGGTGGACACCT GGTTCCAGGTGGGCTCGAAGGACGAGGCGCCCGGGCGCACCGGGTTCGCGCACCTGTTCGAGCACCTCATGTTCATGGGG ACGAACCGCGTCCCCGGGAACCGCTTCGACGTGATCATGGAGTCGGGGGGCGGCTCCAACAACGCGTCCACCTCGTCGGA CCGGACCAACTACTACAGCGTCGGGCCCTCGCAGCTCCTCCCCACGCTGCTCTGGCTGGACGCGGACCGGCTGCAGGCGC TCGCCGACGCGATGACCCAGGAGAAGCTCGACCTGCAGCGCGGGGTGGTGCGCAACGAGCGGCGGCAGAGCTACGAGAAC ACGCCCTACGGCGCCGCCGAGCTGGTCGTCCCCGAGGTCATGTACCCGGAGGGCCACCCGTACCACCACCCGGTGATCGG CAGCCACGCGGACCTCGAGGCGGCCACGCTCGAGGACGTGAAGGGCTTCTTCCGGACCTGGTACGTGCCCGCGAACGCGA CGCTGGTGGTGGCGGGCGACTTCCGGCCGGACGAGGTGCGCCCGCTCGTGGAGCAGCTGTTCGGCGCCGTCCCGCTGCGC GCGCCGCCCGCGCCCGCGCGCGCGGCGCCGGTGCGGCTCGAGCGCGAGGTGCGCCGGATCCTGTCCGACCGGGTGGAGCT GCCGAAGCTCATCCTCGCGTGGCACGCGCCCGCCGCCTACGCCGAGGGCTCGGCGGAGCTGGAGCTCCTCGCCGACGTGC TGGCGGAGGGGCCGTCGTCGCGCCTCGACCGTCGGCTCGTGCAGGAGCTGCGGCTCGCCGAGTCGGTGACCGCGTACCTC GACCCCGGGCGGCTCGGCTCGCTGTTCCGCGTGGAGGTGACCGGCACGCCCGGCGCCGACCTGGAGCGGGTGAAGCGCGA GGCGCTGGCGGTGCTCGCGGCGCTGCAGGCGAAGGGGCCCGAGGCGCGCGAGCTCGCCCGCGTGCGCGCGCAGGCGGAGC GCCGCCGGCGCGAGGAGCGAGAGCACCTCGTGCACCGCGCCGACAAGCTGAACGAGTACCTCGCCTACTACGGCGAGCCG GACGGCTTCGCCCGCGACCTCGCCCGCATCACCTCCGCCACCGCCGCCGGCCTGCGCGTGGCCGCCCGCGGCCTGGGCGA GGGCCGGCTCGACCTGCGCGTCCTCCCCGCCCGCGCCGGCTCCGCGAAGGCGGAGATCCCCGACGCCCCGCCGCCGCCGC TCGCCGCCCGCCCGTTCGATCCGCCCGCGCCGGAGGTGTTCCGGCTCGCGAACGGCCTCGAGGTGCGGGTCGCGCCGCGC CCGGGCACCGGGCTGTTCGCGGCGCACCTGGTCCTGCCCGGCGGCGCCGCCGCGGTCCCGGCCGAGAAGGCCGGGCTCGC GCCCATCCTCGCCGAGCTGCTCACGTCCGGCGCGGGCGGGCGCAGCGCCGCGGAGTACGCCGACGCCATCCGCGCGCTCG GCGCGAGCGTCGAGGCCGAGGCGCGCCCCGCCTCGCTCCAGGTGTCGGTGAGCGGGCTCTCCGCCCACCTCGCCCCCGCG CTCGACCTGTTCGCGGACGCGGTGCTCCGCCCGAACCTGGCGCGCGCCGACTTCGAGCGCGAGGCGGCGCTGGCGCTGGC GCGCCTGGAGGCCCGGCCCGACGACCCGCGCAAGGTGGCGCCGGTGGTGGCCGCGGCGGCGATCTTCGGCAGGGGCGACC CGCGCGGCCGGCCGGTGGACGGCTGGGCCGCCACGGTGCGCACCGTCACGCTCGACGACGTGCGCCGGCTCGCGCCGCGG CTGCTCGACCCGCGCGGCGCGACGCTGGTGGTGGCGGGCGACGTCGATCCGGCGGCGCTCCGGCGCCTGCTCGCGCCGCG GCTCGGCGCCTGGCGCGGCACCGGCCCGGCGCCCGCGGCGGCGCCGGCCCCGCTGACCACCTCGCCGGGCGGGCGCGTCC TGCTGGTGGATCGACCCGGCGCCCCGCAGACCCGCATCCTCCTGGCGCGCCCGGTGGCCCCCGCGGCCGAGCCGGCGCGC GCGCTCCGCGAGCTCGTGAACGTGGTGCTCGGCGGGAGCTTCACCTCGCGCCTGAACCAGAACCTGCGCGAGAAGCACGG CTACACCTACGGCGCGCGGAGCGCGTTCGAGACCGAGGGCGGGCAGGGGCTGTTCACCGCCGGCGCGGCGGTGCAGACCG AGGTGACGGGCGCGGCGCTCGTGGAGCTGCGGCGCGAGCTGGACGGGCTCGCCGCCGCGGGCGTGGACGCGGCCGAGACC GCGAAGGCACGCGAGACGGCGCGGCACCGGACGGTGGAGGAGATCCAGACCACCGCCGGGCTCGCCGACGCGCTCGCCGC GGCGGTCCTGGAGGGCCGCCCGCCCGACGCGCTCCGGCGCGAGGCCGAGGCGCTCGCCTCGGTCGAGCCCGCCCGCGCCG CCGCCGAGGCGAGGACAGGGCCGTACGCCTTCGGCGGGCTCACGGTCGTCCTGGTCGGCGACCGGAAGGCCGTGCTGCCC CAGCTCGAGAAGGCCGGGGTCCCGCGGCCGGTGGTGGTGGACCCCGACGGCACCCCCGTCCCCGACCCAGAGTAA
Upstream 100 bases:
>100_bases TTCTGGCGCACGGCCCCGTTCTACCACCCCGGCGCGGCCGTTCGCGCTGCGTGACGCCGTGCCGCAGGCGTGCTTTCCTG CCCGCTCCGGAGGAACCCGC
Downstream 100 bases:
>100_bases TTTTCGCGGGCGGGGGAGCGGAGGGGGCGAAACGTTCGTTCCGCGACCGCTCGCGCCGGAATGCCCGCAGATCGGCGTCC GCCGGACGGACGGCGGACCG
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MLAPLVPLVPLAALALAAAPAAPPLELTSFSLPNGLTVVLAPDHRLPQVAVDTWFQVGSKDEAPGRTGFAHLFEHLMFMG TNRVPGNRFDVIMESGGGSNNASTSSDRTNYYSVGPSQLLPTLLWLDADRLQALADAMTQEKLDLQRGVVRNERRQSYEN TPYGAAELVVPEVMYPEGHPYHHPVIGSHADLEAATLEDVKGFFRTWYVPANATLVVAGDFRPDEVRPLVEQLFGAVPLR APPAPARAAPVRLEREVRRILSDRVELPKLILAWHAPAAYAEGSAELELLADVLAEGPSSRLDRRLVQELRLAESVTAYL DPGRLGSLFRVEVTGTPGADLERVKREALAVLAALQAKGPEARELARVRAQAERRRREEREHLVHRADKLNEYLAYYGEP DGFARDLARITSATAAGLRVAARGLGEGRLDLRVLPARAGSAKAEIPDAPPPPLAARPFDPPAPEVFRLANGLEVRVAPR PGTGLFAAHLVLPGGAAAVPAEKAGLAPILAELLTSGAGGRSAAEYADAIRALGASVEAEARPASLQVSVSGLSAHLAPA LDLFADAVLRPNLARADFEREAALALARLEARPDDPRKVAPVVAAAAIFGRGDPRGRPVDGWAATVRTVTLDDVRRLAPR LLDPRGATLVVAGDVDPAALRRLLAPRLGAWRGTGPAPAAAPAPLTTSPGGRVLLVDRPGAPQTRILLARPVAPAAEPAR ALRELVNVVLGGSFTSRLNQNLREKHGYTYGARSAFETEGGQGLFTAGAAVQTEVTGAALVELRRELDGLAAAGVDAAET AKARETARHRTVEEIQTTAGLADALAAAVLEGRPPDALRREAEALASVEPARAAAEARTGPYAFGGLTVVLVGDRKAVLP QLEKAGVPRPVVVDPDGTPVPDPE
Sequences:
>Translated_904_residues MLAPLVPLVPLAALALAAAPAAPPLELTSFSLPNGLTVVLAPDHRLPQVAVDTWFQVGSKDEAPGRTGFAHLFEHLMFMG TNRVPGNRFDVIMESGGGSNNASTSSDRTNYYSVGPSQLLPTLLWLDADRLQALADAMTQEKLDLQRGVVRNERRQSYEN TPYGAAELVVPEVMYPEGHPYHHPVIGSHADLEAATLEDVKGFFRTWYVPANATLVVAGDFRPDEVRPLVEQLFGAVPLR APPAPARAAPVRLEREVRRILSDRVELPKLILAWHAPAAYAEGSAELELLADVLAEGPSSRLDRRLVQELRLAESVTAYL DPGRLGSLFRVEVTGTPGADLERVKREALAVLAALQAKGPEARELARVRAQAERRRREEREHLVHRADKLNEYLAYYGEP DGFARDLARITSATAAGLRVAARGLGEGRLDLRVLPARAGSAKAEIPDAPPPPLAARPFDPPAPEVFRLANGLEVRVAPR PGTGLFAAHLVLPGGAAAVPAEKAGLAPILAELLTSGAGGRSAAEYADAIRALGASVEAEARPASLQVSVSGLSAHLAPA LDLFADAVLRPNLARADFEREAALALARLEARPDDPRKVAPVVAAAAIFGRGDPRGRPVDGWAATVRTVTLDDVRRLAPR LLDPRGATLVVAGDVDPAALRRLLAPRLGAWRGTGPAPAAAPAPLTTSPGGRVLLVDRPGAPQTRILLARPVAPAAEPAR ALRELVNVVLGGSFTSRLNQNLREKHGYTYGARSAFETEGGQGLFTAGAAVQTEVTGAALVELRRELDGLAAAGVDAAET AKARETARHRTVEEIQTTAGLADALAAAVLEGRPPDALRREAEALASVEPARAAAEARTGPYAFGGLTVVLVGDRKAVLP QLEKAGVPRPVVVDPDGTPVPDPE >Mature_904_residues MLAPLVPLVPLAALALAAAPAAPPLELTSFSLPNGLTVVLAPDHRLPQVAVDTWFQVGSKDEAPGRTGFAHLFEHLMFMG TNRVPGNRFDVIMESGGGSNNASTSSDRTNYYSVGPSQLLPTLLWLDADRLQALADAMTQEKLDLQRGVVRNERRQSYEN TPYGAAELVVPEVMYPEGHPYHHPVIGSHADLEAATLEDVKGFFRTWYVPANATLVVAGDFRPDEVRPLVEQLFGAVPLR APPAPARAAPVRLEREVRRILSDRVELPKLILAWHAPAAYAEGSAELELLADVLAEGPSSRLDRRLVQELRLAESVTAYL DPGRLGSLFRVEVTGTPGADLERVKREALAVLAALQAKGPEARELARVRAQAERRRREEREHLVHRADKLNEYLAYYGEP DGFARDLARITSATAAGLRVAARGLGEGRLDLRVLPARAGSAKAEIPDAPPPPLAARPFDPPAPEVFRLANGLEVRVAPR PGTGLFAAHLVLPGGAAAVPAEKAGLAPILAELLTSGAGGRSAAEYADAIRALGASVEAEARPASLQVSVSGLSAHLAPA LDLFADAVLRPNLARADFEREAALALARLEARPDDPRKVAPVVAAAAIFGRGDPRGRPVDGWAATVRTVTLDDVRRLAPR LLDPRGATLVVAGDVDPAALRRLLAPRLGAWRGTGPAPAAAPAPLTTSPGGRVLLVDRPGAPQTRILLARPVAPAAEPAR ALRELVNVVLGGSFTSRLNQNLREKHGYTYGARSAFETEGGQGLFTAGAAVQTEVTGAALVELRRELDGLAAAGVDAAET AKARETARHRTVEEIQTTAGLADALAAAVLEGRPPDALRREAEALASVEPARAAAEARTGPYAFGGLTVVLVGDRKAVLP QLEKAGVPRPVVVDPDGTPVPDPE
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=361, Percent_Identity=24.0997229916898, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1787770, Length=252, Percent_Identity=30.5555555555556, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71999683, Length=205, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323421, Length=261, Percent_Identity=24.5210727969349, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357875, Length=249, Percent_Identity=24.0963855421687, Blast_Score=69, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646943, Length=249, Percent_Identity=24.0963855421687, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 95633; Mature: 95633
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPLVPLVPLAALALAAAPAAPPLELTSFSLPNGLTVVLAPDHRLPQVAVDTWFQVGSK CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCC DEAPGRTGFAHLFEHLMFMGTNRVPGNRFDVIMESGGGSNNASTSSDRTNYYSVGPSQLL CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCHHHHH PTLLWLDADRLQALADAMTQEKLDLQRGVVRNERRQSYENTPYGAAELVVPEVMYPEGHP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECHHCCCCCCC YHHPVIGSHADLEAATLEDVKGFFRTWYVPANATLVVAGDFRPDEVRPLVEQLFGAVPLR CCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC APPAPARAAPVRLEREVRRILSDRVELPKLILAWHAPAAYAEGSAELELLADVLAEGPSS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCHH RLDRRLVQELRLAESVTAYLDPGRLGSLFRVEVTGTPGADLERVKREALAVLAALQAKGP HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EARELARVRAQAERRRREEREHLVHRADKLNEYLAYYGEPDGFARDLARITSATAAGLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AARGLGEGRLDLRVLPARAGSAKAEIPDAPPPPLAARPFDPPAPEVFRLANGLEVRVAPR HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECC PGTGLFAAHLVLPGGAAAVPAEKAGLAPILAELLTSGAGGRSAAEYADAIRALGASVEAE CCCCCEEEHEEECCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC ARPASLQVSVSGLSAHLAPALDLFADAVLRPNLARADFEREAALALARLEARPDDPRKVA CCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH PVVAAAAIFGRGDPRGRPVDGWAATVRTVTLDDVRRLAPRLLDPRGATLVVAGDVDPAAL HHHHHHHHHCCCCCCCCCCCCHHHHEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHH RRLLAPRLGAWRGTGPAPAAAPAPLTTSPGGRVLLVDRPGAPQTRILLARPVAPAAEPAR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHH ALRELVNVVLGGSFTSRLNQNLREKHGYTYGARSAFETEGGQGLFTAGAAVQTEVTGAAL HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH VELRRELDGLAAAGVDAAETAKARETARHRTVEEIQTTAGLADALAAAVLEGRPPDALRR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH EAEALASVEPARAAAEARTGPYAFGGLTVVLVGDRKAVLPQLEKAGVPRPVVVDPDGTPV HHHHHHHCCHHHHHHHHCCCCEEECCEEEEEECCCHHHHHHHHHCCCCCCEEECCCCCCC PDPE CCCC >Mature Secondary Structure MLAPLVPLVPLAALALAAAPAAPPLELTSFSLPNGLTVVLAPDHRLPQVAVDTWFQVGSK CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCC DEAPGRTGFAHLFEHLMFMGTNRVPGNRFDVIMESGGGSNNASTSSDRTNYYSVGPSQLL CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCHHHHH PTLLWLDADRLQALADAMTQEKLDLQRGVVRNERRQSYENTPYGAAELVVPEVMYPEGHP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECHHCCCCCCC YHHPVIGSHADLEAATLEDVKGFFRTWYVPANATLVVAGDFRPDEVRPLVEQLFGAVPLR CCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC APPAPARAAPVRLEREVRRILSDRVELPKLILAWHAPAAYAEGSAELELLADVLAEGPSS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCHH RLDRRLVQELRLAESVTAYLDPGRLGSLFRVEVTGTPGADLERVKREALAVLAALQAKGP HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EARELARVRAQAERRRREEREHLVHRADKLNEYLAYYGEPDGFARDLARITSATAAGLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AARGLGEGRLDLRVLPARAGSAKAEIPDAPPPPLAARPFDPPAPEVFRLANGLEVRVAPR HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECC PGTGLFAAHLVLPGGAAAVPAEKAGLAPILAELLTSGAGGRSAAEYADAIRALGASVEAE CCCCCEEEHEEECCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC ARPASLQVSVSGLSAHLAPALDLFADAVLRPNLARADFEREAALALARLEARPDDPRKVA CCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH PVVAAAAIFGRGDPRGRPVDGWAATVRTVTLDDVRRLAPRLLDPRGATLVVAGDVDPAAL HHHHHHHHHCCCCCCCCCCCCHHHHEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHH RRLLAPRLGAWRGTGPAPAAAPAPLTTSPGGRVLLVDRPGAPQTRILLARPVAPAAEPAR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHH ALRELVNVVLGGSFTSRLNQNLREKHGYTYGARSAFETEGGQGLFTAGAAVQTEVTGAAL HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH VELRRELDGLAAAGVDAAETAKARETARHRTVEEIQTTAGLADALAAAVLEGRPPDALRR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH EAEALASVEPARAAAEARTGPYAFGGLTVVLVGDRKAVLPQLEKAGVPRPVVVDPDGTPV HHHHHHHCCHHHHHHHHCCCCEEECCEEEEEECCCHHHHHHHHHCCCCCCEEECCCCCCC PDPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]