| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is hflB [C]
Identifier: 220915434
GI number: 220915434
Start: 348213
End: 349751
Strand: Reverse
Name: hflB [C]
Synonym: A2cp1_0313
Alternate gene names: 220915434
Gene position: 349751-348213 (Counterclockwise)
Preceding gene: 220915435
Following gene: 220915433
Centisome position: 6.95
GC content: 73.88
Gene sequence:
>1539_bases ATGTCCGCCTCCGGCGCCGCCCCGCGCCCCCAGCCCGCCTTCGTGCAGGAGCTCGACACGCTGGTGCGGGCCCGCTACCC GCTCGTCTACCTCGTCACCTCCGAGGAGCAGCGCCTCGAGGCCATCCTCGACGGGCTCGCCGACCGCCACGGGAAGGCGC TGCTCGGCTGGTCCATCGCCCGGGGCTTCCGGCGGCTCGGCGGCACCCGCGGCCCCGCGCCCGAGGGCGCGAAGGATCCG CTCGAGGCGCTCGCCGCCATCGAGAAGCTGGCCGAGCCGGCGCTGGTGGTGCTGAAGGACTTCCACCCGTTCCTGGCGGA TCCGGCGGTGGTGCGCGGGCTGCGCGAGCTCGGGCACGCGCTGAAGTCCACCTACACCACGGTGCTGCTGCTCTCGCCCA CGCTCGTCATCCCGCCCGAGATCGAGAAGGAGATCTCGGTCCTCGACGTGCCGCTGCCCGGGTACCGCGACCTGCTCGAC CTGCTGAAGGAGATCGTCGGGGTGGTGCGCCAGAGCGGGCGCGCCCAGGTCGAGCTGAACCAGGACGACGCCGACCAGCT CATCCAGGCCGCGCTCGGCCTCACGCTCTCGGAGGCGGAGAGCGCGTTCGCGAAGGCCATCGCCACCGACGGCCGGCTCT CGCGCGACGACGTGCCGCTCGTGCTGGAGGAGAAGCGGCAGGTGATCCGCAAGAGCGGCCTGCTCGAGTACTTCGCGACG GACGCGCGGCTGGCAGGGGTGGGCGGCATGGCGAGCCTGAAGGCCTGGCTCGGGCGCCGCGGCGCCGCGTTCTCCGAGGC GGCGCGGCGCTTCGGGCTCCCCGAGCCGAAGGGCCTGCTGCTCCTCGGCGTGCAGGGCTGCGGCAAGAGCCTCACCGCCA AGGCGATCGCGGCGCAGTGGCGGCTGCCGCTGCTCCGGCTCGACATGGGCCGGATCTTCAGCGGGCTGGTGGGCTCGTCG GAGGAGAACCTGCGCCGCGCCATCCGTGTCGCGGAGAGCGTCGCGCCGGTGGTGCTGTGGGTGGACGAGATCGAGAAGGG GCTCTCCGGGACGCAGTCCTCGGGGGTGAGCGACGGCGGCGTCACCGCGCGCGTGTTCGGCGCGCTGCTCACCTGGCTGC AGGAGAAGACCGCGCCCGTGTTCGTGGTCGCGACCGCGAACCGCATCGAGCAGCTGCCCCCCGAGCTCCTGCGCAAGGGG CGCTTCGACGAGATCTTCTTCATCGACCTGCCGCTCGCACCGGAGCGGCGCGAGATCTTCCAGATCCACCTGGCGCGGCG CCGCCGCGACCCCGCGCGCTTCGACCTCCACGCGCTGGCCGCGGCGAGCGAGGGCTTCAGCGGCGCCGAGATCGAGCAGG CGGTGGTCTCCGGCCTGTACGACGCGTTCGCCGAGGGGGTGGACCTCGCGCAGGGCCACGTCGAGCGCGCCGTGCGCGAG TCGCTCCCGCTCTCGACCACGATGCGCGAGGACATCGCGCGGCTGCGCGAGTGGGCGCGCACCCGCACCCGCCCTGCCTC CGCGCCGACCGCCGGCTGA
Upstream 100 bases:
>100_bases GATCGCCGCGGTGGACCTCGGCGCGGGCTCCGCCGCGCTGGCCTGGCTCGAGGCCCCCTGAGCGACGCGCGGCCGCGCGG CGGCTGCTACACTCGCGCGC
Downstream 100 bases:
>100_bases CCGGAGCGCGCCCGCATGGCCTCCCGCCTCCGCCGCTTCCTCCACCTCGAGCGCCCGCGCGACGGCGCCCCCGCGCCCGA CCCGGCGCCCGGGACCGCCG
Product: AAA ATPase central domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSASGAAPRPQPAFVQELDTLVRARYPLVYLVTSEEQRLEAILDGLADRHGKALLGWSIARGFRRLGGTRGPAPEGAKDP LEALAAIEKLAEPALVVLKDFHPFLADPAVVRGLRELGHALKSTYTTVLLLSPTLVIPPEIEKEISVLDVPLPGYRDLLD LLKEIVGVVRQSGRAQVELNQDDADQLIQAALGLTLSEAESAFAKAIATDGRLSRDDVPLVLEEKRQVIRKSGLLEYFAT DARLAGVGGMASLKAWLGRRGAAFSEAARRFGLPEPKGLLLLGVQGCGKSLTAKAIAAQWRLPLLRLDMGRIFSGLVGSS EENLRRAIRVAESVAPVVLWVDEIEKGLSGTQSSGVSDGGVTARVFGALLTWLQEKTAPVFVVATANRIEQLPPELLRKG RFDEIFFIDLPLAPERREIFQIHLARRRRDPARFDLHALAAASEGFSGAEIEQAVVSGLYDAFAEGVDLAQGHVERAVRE SLPLSTTMREDIARLREWARTRTRPASAPTAG
Sequences:
>Translated_512_residues MSASGAAPRPQPAFVQELDTLVRARYPLVYLVTSEEQRLEAILDGLADRHGKALLGWSIARGFRRLGGTRGPAPEGAKDP LEALAAIEKLAEPALVVLKDFHPFLADPAVVRGLRELGHALKSTYTTVLLLSPTLVIPPEIEKEISVLDVPLPGYRDLLD LLKEIVGVVRQSGRAQVELNQDDADQLIQAALGLTLSEAESAFAKAIATDGRLSRDDVPLVLEEKRQVIRKSGLLEYFAT DARLAGVGGMASLKAWLGRRGAAFSEAARRFGLPEPKGLLLLGVQGCGKSLTAKAIAAQWRLPLLRLDMGRIFSGLVGSS EENLRRAIRVAESVAPVVLWVDEIEKGLSGTQSSGVSDGGVTARVFGALLTWLQEKTAPVFVVATANRIEQLPPELLRKG RFDEIFFIDLPLAPERREIFQIHLARRRRDPARFDLHALAAASEGFSGAEIEQAVVSGLYDAFAEGVDLAQGHVERAVRE SLPLSTTMREDIARLREWARTRTRPASAPTAG >Mature_511_residues SASGAAPRPQPAFVQELDTLVRARYPLVYLVTSEEQRLEAILDGLADRHGKALLGWSIARGFRRLGGTRGPAPEGAKDPL EALAAIEKLAEPALVVLKDFHPFLADPAVVRGLRELGHALKSTYTTVLLLSPTLVIPPEIEKEISVLDVPLPGYRDLLDL LKEIVGVVRQSGRAQVELNQDDADQLIQAALGLTLSEAESAFAKAIATDGRLSRDDVPLVLEEKRQVIRKSGLLEYFATD ARLAGVGGMASLKAWLGRRGAAFSEAARRFGLPEPKGLLLLGVQGCGKSLTAKAIAAQWRLPLLRLDMGRIFSGLVGSSE ENLRRAIRVAESVAPVVLWVDEIEKGLSGTQSSGVSDGGVTARVFGALLTWLQEKTAPVFVVATANRIEQLPPELLRKGR FDEIFFIDLPLAPERREIFQIHLARRRRDPARFDLHALAAASEGFSGAEIEQAVVSGLYDAFAEGVDLAQGHVERAVRES LPLSTTMREDIARLREWARTRTRPASAPTAG
Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]
Homologues:
Organism=Homo sapiens, GI45643125, Length=227, Percent_Identity=33.920704845815, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI45643123, Length=227, Percent_Identity=33.920704845815, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI157671927, Length=212, Percent_Identity=33.4905660377358, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI6005942, Length=320, Percent_Identity=27.5, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI4507173, Length=203, Percent_Identity=34.4827586206897, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI195539395, Length=218, Percent_Identity=29.8165137614679, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI24430151, Length=192, Percent_Identity=34.375, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI229577436, Length=239, Percent_Identity=29.7071129707113, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI21361144, Length=195, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI24497618, Length=225, Percent_Identity=29.3333333333333, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI194018488, Length=128, Percent_Identity=37.5, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI4505725, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI24497435, Length=228, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI300192933, Length=221, Percent_Identity=30.316742081448, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI153792536, Length=198, Percent_Identity=29.7979797979798, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI310125280, Length=228, Percent_Identity=29.8245614035088, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI310125282, Length=279, Percent_Identity=27.5985663082437, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI24430155, Length=218, Percent_Identity=26.605504587156, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI89064750, Length=217, Percent_Identity=26.7281105990783, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI5729991, Length=217, Percent_Identity=26.7281105990783, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI156564401, Length=279, Percent_Identity=27.5985663082437, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI7657689, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI21327685, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI31377644, Length=182, Percent_Identity=28.021978021978, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI226371754, Length=185, Percent_Identity=30.2702702702703, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1789568, Length=193, Percent_Identity=32.1243523316062, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17508053, Length=355, Percent_Identity=29.8591549295775, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17532375, Length=244, Percent_Identity=30.7377049180328, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI25153574, Length=327, Percent_Identity=26.9113149847095, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI193209502, Length=257, Percent_Identity=28.7937743190661, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17563250, Length=191, Percent_Identity=34.0314136125654, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17531535, Length=232, Percent_Identity=29.7413793103448, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71987372, Length=219, Percent_Identity=31.0502283105023, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71987364, Length=219, Percent_Identity=31.0502283105023, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537217, Length=182, Percent_Identity=33.5164835164835, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17508701, Length=192, Percent_Identity=30.2083333333333, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562804, Length=284, Percent_Identity=28.169014084507, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17554264, Length=192, Percent_Identity=31.25, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534323, Length=191, Percent_Identity=31.413612565445, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI133931034, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI193206114, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI193206116, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17554786, Length=229, Percent_Identity=28.3842794759825, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71994521, Length=209, Percent_Identity=29.6650717703349, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI25144278, Length=229, Percent_Identity=27.9475982532751, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI25144281, Length=229, Percent_Identity=27.9475982532751, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI133901662, Length=234, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI133901658, Length=231, Percent_Identity=27.7056277056277, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17541226, Length=212, Percent_Identity=26.4150943396226, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17541224, Length=212, Percent_Identity=26.4150943396226, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17505546, Length=222, Percent_Identity=27.4774774774775, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25146157, Length=187, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560432, Length=181, Percent_Identity=29.8342541436464, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17554784, Length=219, Percent_Identity=26.027397260274, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6323429, Length=291, Percent_Identity=30.5841924398625, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6320077, Length=243, Percent_Identity=30.4526748971193, Blast_Score=104, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6322651, Length=293, Percent_Identity=29.0102389078498, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324833, Length=206, Percent_Identity=31.5533980582524, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6322994, Length=201, Percent_Identity=29.3532338308458, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319554, Length=266, Percent_Identity=31.203007518797, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321465, Length=197, Percent_Identity=27.9187817258883, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324691, Length=224, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320197, Length=191, Percent_Identity=29.8429319371728, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321390, Length=212, Percent_Identity=28.7735849056604, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320854, Length=196, Percent_Identity=31.6326530612245, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324000, Length=143, Percent_Identity=34.2657342657343, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323736, Length=220, Percent_Identity=30.9090909090909, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321709, Length=196, Percent_Identity=29.5918367346939, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320602, Length=218, Percent_Identity=27.5229357798165, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325281, Length=205, Percent_Identity=27.3170731707317, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325431, Length=185, Percent_Identity=28.1081081081081, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322704, Length=155, Percent_Identity=29.0322580645161, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24639391, Length=221, Percent_Identity=33.0316742081448, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI19921202, Length=219, Percent_Identity=35.1598173515982, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI45552965, Length=212, Percent_Identity=32.0754716981132, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI281365776, Length=212, Percent_Identity=32.0754716981132, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24660075, Length=212, Percent_Identity=32.0754716981132, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI161076488, Length=285, Percent_Identity=27.719298245614, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI17137560, Length=285, Percent_Identity=27.719298245614, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI161076486, Length=285, Percent_Identity=27.719298245614, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24652279, Length=182, Percent_Identity=33.5164835164835, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24656825, Length=246, Percent_Identity=31.3008130081301, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656820, Length=246, Percent_Identity=31.3008130081301, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21355121, Length=239, Percent_Identity=32.6359832635983, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281363136, Length=180, Percent_Identity=32.7777777777778, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI78707192, Length=180, Percent_Identity=32.7777777777778, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24649446, Length=191, Percent_Identity=34.0314136125654, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24640100, Length=215, Percent_Identity=31.1627906976744, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24658770, Length=205, Percent_Identity=29.7560975609756, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI17738151, Length=194, Percent_Identity=31.4432989690722, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI28574878, Length=209, Percent_Identity=29.6650717703349, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI19920408, Length=228, Percent_Identity=28.9473684210526, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24665814, Length=209, Percent_Identity=29.6650717703349, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24651451, Length=215, Percent_Identity=29.7674418604651, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI20129529, Length=182, Percent_Identity=32.4175824175824, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24663015, Length=217, Percent_Identity=29.9539170506912, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI18860063, Length=218, Percent_Identity=27.0642201834862, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI28573010, Length=225, Percent_Identity=29.7777777777778, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281361487, Length=186, Percent_Identity=25.8064516129032, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI17864540, Length=225, Percent_Identity=29.7777777777778, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129423, Length=184, Percent_Identity=28.804347826087, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI18859657, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI17137738, Length=197, Percent_Identity=29.9492385786802, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581396, Length=183, Percent_Identity=27.3224043715847, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI45554047, Length=132, Percent_Identity=30.3030303030303, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR003593 - InterPro: IPR005938 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR003338 - InterPro: IPR004201 - InterPro: IPR015415 [H]
Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 55540; Mature: 55408
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASGAAPRPQPAFVQELDTLVRARYPLVYLVTSEEQRLEAILDGLADRHGKALLGWSIA CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH RGFRRLGGTRGPAPEGAKDPLEALAAIEKLAEPALVVLKDFHPFLADPAVVRGLRELGHA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHCCHHHHHHHHHHHHH LKSTYTTVLLLSPTLVIPPEIEKEISVLDVPLPGYRDLLDLLKEIVGVVRQSGRAQVELN HHHHHHHHEEECCCEECCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC QDDADQLIQAALGLTLSEAESAFAKAIATDGRLSRDDVPLVLEEKRQVIRKSGLLEYFAT CCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHC DARLAGVGGMASLKAWLGRRGAAFSEAARRFGLPEPKGLLLLGVQGCGKSLTAKAIAAQW CHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH RLPLLRLDMGRIFSGLVGSSEENLRRAIRVAESVAPVVLWVDEIEKGLSGTQSSGVSDGG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCCCCC VTARVFGALLTWLQEKTAPVFVVATANRIEQLPPELLRKGRFDEIFFIDLPLAPERREIF HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHHHHCCCCCEEEEEECCCCCCHHHHH QIHLARRRRDPARFDLHALAAASEGFSGAEIEQAVVSGLYDAFAEGVDLAQGHVERAVRE HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPLSTTMREDIARLREWARTRTRPASAPTAG HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SASGAAPRPQPAFVQELDTLVRARYPLVYLVTSEEQRLEAILDGLADRHGKALLGWSIA CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH RGFRRLGGTRGPAPEGAKDPLEALAAIEKLAEPALVVLKDFHPFLADPAVVRGLRELGHA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHCCHHHHHHHHHHHHH LKSTYTTVLLLSPTLVIPPEIEKEISVLDVPLPGYRDLLDLLKEIVGVVRQSGRAQVELN HHHHHHHHEEECCCEECCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC QDDADQLIQAALGLTLSEAESAFAKAIATDGRLSRDDVPLVLEEKRQVIRKSGLLEYFAT CCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHC DARLAGVGGMASLKAWLGRRGAAFSEAARRFGLPEPKGLLLLGVQGCGKSLTAKAIAAQW CHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH RLPLLRLDMGRIFSGLVGSSEENLRRAIRVAESVAPVVLWVDEIEKGLSGTQSSGVSDGG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCCCCC VTARVFGALLTWLQEKTAPVFVVATANRIEQLPPELLRKGRFDEIFFIDLPLAPERREIF HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHHHHCCCCCEEEEEECCCCCCHHHHH QIHLARRRRDPARFDLHALAAASEGFSGAEIEQAVVSGLYDAFAEGVDLAQGHVERAVRE HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPLSTTMREDIARLREWARTRTRPASAPTAG HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]