Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915417
Identifier: 220915417
GI number: 220915417
Start: 331518
End: 332567
Strand: Reverse
Name: 220915417
Synonym: A2cp1_0296
Alternate gene names: NA
Gene position: 332567-331518 (Counterclockwise)
Preceding gene: 220915426
Following gene: 220915416
Centisome position: 6.61
GC content: 82.67
Gene sequence:
>1050_bases ATGCCCCGCCGCCGTCCCGCCTCCCCGCGCCCGCGCCCCGGCCATCCGGCCGCGGCGGGGAAGGTGCGCGCGCCGGTGCG CGCCGGCGCGCGGGGGGACGTGCTGCTGGCCTGGGCGCTCGATCGCGACGGCCGGAAGGTGAACGCCGGCCGGCTCGACC CCGCCGATCGCCGCCGGCTCGCGCCGTTCACCTGCCTCGGCTGCGGCGAGCCGCTCGTCCCGCACCTCGGGCGCGTCCGG GCGCGCCACTTCGCGCACGCGCCCGGCTCCGCCTGCCCGCTCACGGCGCCGGAGACCGCGCTCCACCTGGACGCGAAGGA GCGGCTGCTGGCGCTCTGCGCCGACGCGTTCGGGCGCCGCCGCACCGTGACCGTGCTGGCGCGCTGCCCGTCCTGCCGCC GCCTCGCGCCGCGCGACCTCGCCGCGGAGGGGGACGCCGCGGCCGCGGAGGGCGCGGTCGGCCCGCTGCGCGCCGACGTG CTGGTGCTGCGCGCCGGGCGGGCGGCGCTCGCCCTGGAGGTCCTGGTCACGCACGCCGTGGACGTGGAGAAGGAGGCGGC GCTCGCCGCGGCCGGCGTGCCGGCGGTGGAGATCGACGCGCGGGAGGAGTGGGAGCGGGCGGAGCCGGACGGCGCGGTGG CCATCGTCCCGGTGCGCTCGCTCGGCTTCCCGGCCTGCCCGGCCTGTGCGGCCGGCGCCCGCGCCGACGCCGACCGGGCG CTCGGCGGGGAGGCGGCGGAGATCGCCGAGCTGGAGGCCTACCGCGCGCGCGGCCTGCTCGGCCCGGCGCTTCGCGCGCC CGCCCTCGCCGGCGCGCCCGGGGCCGCCGGCGGGCCGGACGCGCCGTTCACCGAGGCGGAGCGGGCCGACCTGGCGGCGC GCTTCGCCTGCCCGGACTGCGGCGGCGCCGCGATCGCGTTCGGCGCCCGGATCGCCCGCCATCCGTGCCCCGGCCGGCCG CCCCGCCCGATCGCCTGGCGCGGCTACGACGGCGCGCGGATCGAGCTCACCTGGTGGAAGCGGCCCGCCGGCCCGCCGCC GCGGCGGTGA
Upstream 100 bases:
>100_bases GGCGCGGAGCGCGCCGCCGCGCCATCCCTACCGCGCGCGCGCGCCGCACGCAGGAGCCCGGGAGGGGAGGCGCGGCAGGA TCTCGGCTAGATTCCCGTCC
Downstream 100 bases:
>100_bases CCGCCCGCAAGCCTCCGTCCTCCCCGGGCTTTTCCGCAGCGCGCGCCCGCCCGGCATGGACCGTGCCGAGCTTGAATCGG GCCCCGCGCTGTGTTAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPRRRPASPRPRPGHPAAAGKVRAPVRAGARGDVLLAWALDRDGRKVNAGRLDPADRRRLAPFTCLGCGEPLVPHLGRVR ARHFAHAPGSACPLTAPETALHLDAKERLLALCADAFGRRRTVTVLARCPSCRRLAPRDLAAEGDAAAAEGAVGPLRADV LVLRAGRAALALEVLVTHAVDVEKEAALAAAGVPAVEIDAREEWERAEPDGAVAIVPVRSLGFPACPACAAGARADADRA LGGEAAEIAELEAYRARGLLGPALRAPALAGAPGAAGGPDAPFTEAERADLAARFACPDCGGAAIAFGARIARHPCPGRP PRPIAWRGYDGARIELTWWKRPAGPPPRR
Sequences:
>Translated_349_residues MPRRRPASPRPRPGHPAAAGKVRAPVRAGARGDVLLAWALDRDGRKVNAGRLDPADRRRLAPFTCLGCGEPLVPHLGRVR ARHFAHAPGSACPLTAPETALHLDAKERLLALCADAFGRRRTVTVLARCPSCRRLAPRDLAAEGDAAAAEGAVGPLRADV LVLRAGRAALALEVLVTHAVDVEKEAALAAAGVPAVEIDAREEWERAEPDGAVAIVPVRSLGFPACPACAAGARADADRA LGGEAAEIAELEAYRARGLLGPALRAPALAGAPGAAGGPDAPFTEAERADLAARFACPDCGGAAIAFGARIARHPCPGRP PRPIAWRGYDGARIELTWWKRPAGPPPRR >Mature_348_residues PRRRPASPRPRPGHPAAAGKVRAPVRAGARGDVLLAWALDRDGRKVNAGRLDPADRRRLAPFTCLGCGEPLVPHLGRVRA RHFAHAPGSACPLTAPETALHLDAKERLLALCADAFGRRRTVTVLARCPSCRRLAPRDLAAEGDAAAAEGAVGPLRADVL VLRAGRAALALEVLVTHAVDVEKEAALAAAGVPAVEIDAREEWERAEPDGAVAIVPVRSLGFPACPACAAGARADADRAL GGEAAEIAELEAYRARGLLGPALRAPALAGAPGAAGGPDAPFTEAERADLAARFACPDCGGAAIAFGARIARHPCPGRPP RPIAWRGYDGARIELTWWKRPAGPPPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36353; Mature: 36222
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRRPASPRPRPGHPAAAGKVRAPVRAGARGDVLLAWALDRDGRKVNAGRLDPADRRRL CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCCCEECCCCCCHHHHCCC APFTCLGCGEPLVPHLGRVRARHFAHAPGSACPLTAPETALHLDAKERLLALCADAFGRR CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCC RTVTVLARCPSCRRLAPRDLAAEGDAAAAEGAVGPLRADVLVLRAGRAALALEVLVTHAV EEEEEEECCCCHHCCCCCHHCCCCCCHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHHHH DVEKEAALAAAGVPAVEIDAREEWERAEPDGAVAIVPVRSLGFPACPACAAGARADADRA CCHHHHHHHHCCCCEEEECCHHHHHHCCCCCCEEEEEEHHCCCCCCCHHHCCCCCCHHHH LGGEAAEIAELEAYRARGLLGPALRAPALAGAPGAAGGPDAPFTEAERADLAARFACPDC CCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCC GGAAIAFGARIARHPCPGRPPRPIAWRGYDGARIELTWWKRPAGPPPRR CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure PRRRPASPRPRPGHPAAAGKVRAPVRAGARGDVLLAWALDRDGRKVNAGRLDPADRRRL CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCCCEECCCCCCHHHHCCC APFTCLGCGEPLVPHLGRVRARHFAHAPGSACPLTAPETALHLDAKERLLALCADAFGRR CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCC RTVTVLARCPSCRRLAPRDLAAEGDAAAAEGAVGPLRADVLVLRAGRAALALEVLVTHAV EEEEEEECCCCHHCCCCCHHCCCCCCHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHHHH DVEKEAALAAAGVPAVEIDAREEWERAEPDGAVAIVPVRSLGFPACPACAAGARADADRA CCHHHHHHHHCCCCEEEECCHHHHHHCCCCCCEEEEEEHHCCCCCCCHHHCCCCCCHHHH LGGEAAEIAELEAYRARGLLGPALRAPALAGAPGAAGGPDAPFTEAERADLAARFACPDC CCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCC GGAAIAFGARIARHPCPGRPPRPIAWRGYDGARIELTWWKRPAGPPPRR CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA