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The map label for this gene is bphP [H]

Identifier: 220915399

GI number: 220915399

Start: 311635

End: 312852

Strand: Reverse

Name: bphP [H]

Synonym: A2cp1_0278

Alternate gene names: 220915399

Gene position: 312852-311635 (Counterclockwise)

Preceding gene: 220915405

Following gene: 220915395

Centisome position: 6.22

GC content: 78.16

Gene sequence:

>1218_bases
ATGGCCCCGCACGACGCGCCCGGTCAAGAGGCGGGCCAGGCGGCGCAGGCCCAGGGCCGGGTGGACCTGCTGCGCGCCCT
CGACCGGCTGCTCGCGATCGAGCCCGAGGAGCACGCGCTCCGCCGGATCCTCTCGGCGCTCGCCGACGCGGTCCCCGCGG
TCCACGCGGCGGTGCTGCTCGTGCCGGGCGACGAGGGCCGGCTCGCGATCGCGGCCGAGGTCGGCGGCGACGGCCGCCCG
CCCCCGCCCGCCGACGGCGGCGCCGGGCTCGCCGCGGGTGCACCCTGGGTGCGCGGCGATCCCGGCTGGCCGCTCCCGGC
CGGCGCGCGCGCCGGCGCGGCGGCGCCGGCGGGCGGCGGCGCCGTGCTGGTGATGGGCACGCGCGGCGAGGGCGGGTTCG
ATCCCGAGGCGCTGGCGCTGCTCCGCGTGGCCGCGGACCGCGCCGGGCTGGCGCTGGAGCGCGGGCGGCTGCGCCGCGCG
CACGAGTCGGCCGAGGAGGCCGCGCGGCGCGCGCTCGCGGAGGTGGACTCGCGCCGGCGGGCGGTGGACTACATCCTCGG
CATCGTCGGGCACGACCTGCGCAACCCGCTCGGCGCCGTGCACATGTCCGCCGCGCTCCTGCAGAAGCGCGGCGGCCTGG
AGGGCTGGCAGGCGCGCGCCATCGAGCGGATGCGCAGCTCGGCGGGGCGCATGGCGCGGATCATCGCCGACCTGCTCTCG
TACACCCGCACCCGGCTCGGCAACGGCATGCCCATCGACCGCCGCCCGGCGCGGCTCGACGAGATCGCGCGCCGCCCGGT
GGACGAGCTCGGCGCGGTGAACCCGGGGCGCGAGATCACGGTCGAGGTCCGGGGCGACGTGTCGGGCAGCTGGGACCCGG
ATCGCCTGGAGCAGGTGATCTCGAACCTGGTCTCGAACGCGGTGGACCACGGCGACCCCGCCTCGCCGGTGCGGGTGGAG
CTCTCGGGCGAGCCGGACGCGTGCGTGCTCCGGGTGCGCAACACCGGACCGCCGGTGCCGCCCGAGGTGCTCGAGCACCT
GTTCGAGCCGTTCTCGCGCCCGCCGGACGAGAAGAGCCGCAAGGGCTCGGGCCTGGGGCTCGGGCTCTACATCTCGCGCG
AGATCGTGCGCGGCCACGGGGGGGAGATCTCGATCGCCTCCGACGGCGAGACGGTGATCACGGCTCGGCTTCCGCGATCG
CAGAGCCCGGCTCCCTGA

Upstream 100 bases:

>100_bases
AGGCCTCCGCGCCACGGCACGCTGGGCGCCGGCGGCGCTGCCCCGATCGGCCTGTGCCGGGGGGTTCCGCGCCGGGCGAA
CCGCCCCCAGGATGCCCCTC

Downstream 100 bases:

>100_bases
CCCCGCGCCACAGGTCGGCGAGATCGGGCGGGAGCTGGCCCGCCACCTCGCGGGCGGCCGGGCCCATCACCTCGTGCGCC
GCCGCGAGCACCGCGAGCAC

Product: histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MAPHDAPGQEAGQAAQAQGRVDLLRALDRLLAIEPEEHALRRILSALADAVPAVHAAVLLVPGDEGRLAIAAEVGGDGRP
PPPADGGAGLAAGAPWVRGDPGWPLPAGARAGAAAPAGGGAVLVMGTRGEGGFDPEALALLRVAADRAGLALERGRLRRA
HESAEEAARRALAEVDSRRRAVDYILGIVGHDLRNPLGAVHMSAALLQKRGGLEGWQARAIERMRSSAGRMARIIADLLS
YTRTRLGNGMPIDRRPARLDEIARRPVDELGAVNPGREITVEVRGDVSGSWDPDRLEQVISNLVSNAVDHGDPASPVRVE
LSGEPDACVLRVRNTGPPVPPEVLEHLFEPFSRPPDEKSRKGSGLGLGLYISREIVRGHGGEISIASDGETVITARLPRS
QSPAP

Sequences:

>Translated_405_residues
MAPHDAPGQEAGQAAQAQGRVDLLRALDRLLAIEPEEHALRRILSALADAVPAVHAAVLLVPGDEGRLAIAAEVGGDGRP
PPPADGGAGLAAGAPWVRGDPGWPLPAGARAGAAAPAGGGAVLVMGTRGEGGFDPEALALLRVAADRAGLALERGRLRRA
HESAEEAARRALAEVDSRRRAVDYILGIVGHDLRNPLGAVHMSAALLQKRGGLEGWQARAIERMRSSAGRMARIIADLLS
YTRTRLGNGMPIDRRPARLDEIARRPVDELGAVNPGREITVEVRGDVSGSWDPDRLEQVISNLVSNAVDHGDPASPVRVE
LSGEPDACVLRVRNTGPPVPPEVLEHLFEPFSRPPDEKSRKGSGLGLGLYISREIVRGHGGEISIASDGETVITARLPRS
QSPAP
>Mature_404_residues
APHDAPGQEAGQAAQAQGRVDLLRALDRLLAIEPEEHALRRILSALADAVPAVHAAVLLVPGDEGRLAIAAEVGGDGRPP
PPADGGAGLAAGAPWVRGDPGWPLPAGARAGAAAPAGGGAVLVMGTRGEGGFDPEALALLRVAADRAGLALERGRLRRAH
ESAEEAARRALAEVDSRRRAVDYILGIVGHDLRNPLGAVHMSAALLQKRGGLEGWQARAIERMRSSAGRMARIIADLLSY
TRTRLGNGMPIDRRPARLDEIARRPVDELGAVNPGREITVEVRGDVSGSWDPDRLEQVISNLVSNAVDHGDPASPVRVEL
SGEPDACVLRVRNTGPPVPPEVLEHLFEPFSRPPDEKSRKGSGLGLGLYISREIVRGHGGEISIASDGETVITARLPRSQ
SPAP

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790346, Length=206, Percent_Identity=28.1553398058252, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=28.8617886178862, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789149, Length=248, Percent_Identity=28.6290322580645, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789808, Length=215, Percent_Identity=29.7674418604651, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786783, Length=208, Percent_Identity=28.8461538461538, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786600, Length=203, Percent_Identity=28.0788177339901, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786912, Length=280, Percent_Identity=27.5, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790861, Length=224, Percent_Identity=25.4464285714286, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788393, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082128, Length=241, Percent_Identity=25.7261410788382, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787894, Length=218, Percent_Identity=28.8990825688073, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1790436, Length=204, Percent_Identity=25.9803921568627, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081816, Length=245, Percent_Identity=27.7551020408163, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42496; Mature: 42364

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPHDAPGQEAGQAAQAQGRVDLLRALDRLLAIEPEEHALRRILSALADAVPAVHAAVLL
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
VPGDEGRLAIAAEVGGDGRPPPPADGGAGLAAGAPWVRGDPGWPLPAGARAGAAAPAGGG
EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVLVMGTRGEGGFDPEALALLRVAADRAGLALERGRLRRAHESAEEAARRALAEVDSRRR
EEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDYILGIVGHDLRNPLGAVHMSAALLQKRGGLEGWQARAIERMRSSAGRMARIIADLLS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YTRTRLGNGMPIDRRPARLDEIARRPVDELGAVNPGREITVEVRGDVSGSWDPDRLEQVI
HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
SNLVSNAVDHGDPASPVRVELSGEPDACVLRVRNTGPPVPPEVLEHLFEPFSRPPDEKSR
HHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHC
KGSGLGLGLYISREIVRGHGGEISIASDGETVITARLPRSQSPAP
CCCCCEEEHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
APHDAPGQEAGQAAQAQGRVDLLRALDRLLAIEPEEHALRRILSALADAVPAVHAAVLL
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
VPGDEGRLAIAAEVGGDGRPPPPADGGAGLAAGAPWVRGDPGWPLPAGARAGAAAPAGGG
EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVLVMGTRGEGGFDPEALALLRVAADRAGLALERGRLRRAHESAEEAARRALAEVDSRRR
EEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDYILGIVGHDLRNPLGAVHMSAALLQKRGGLEGWQARAIERMRSSAGRMARIIADLLS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YTRTRLGNGMPIDRRPARLDEIARRPVDELGAVNPGREITVEVRGDVSGSWDPDRLEQVI
HHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
SNLVSNAVDHGDPASPVRVELSGEPDACVLRVRNTGPPVPPEVLEHLFEPFSRPPDEKSR
HHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHC
KGSGLGLGLYISREIVRGHGGEISIASDGETVITARLPRSQSPAP
CCCCCEEEHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]