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The map label for this gene is p49 [H]

Identifier: 220915372

GI number: 220915372

Start: 271306

End: 272730

Strand: Reverse

Name: p49 [H]

Synonym: A2cp1_0251

Alternate gene names: 220915372

Gene position: 272730-271306 (Counterclockwise)

Preceding gene: 220915382

Following gene: 220915370

Centisome position: 5.42

GC content: 81.19

Gene sequence:

>1425_bases
GTGCGCACGCCGGACGCCGTGGTGGTCGGCTCGGGGCCGAACGGCCTCGCGGCCGCGGTGGCGCTGGGGGGCGCCGGGCT
GCGGGTGCTGGTGCGCGAGGCGGCGGCGACCGCCGGCGGGGGCGCGCGCACCCTGCCGCTCACCCTCCCCGGCTTCCTGC
ACGATCACTGCTCGGCGGTCCACCCGCTCGCGGTCGCCTCGCCGTTCCTCCGCACGCTGCCGCTCGCGGCGCACGGCCTG
CGCTGGATCTCGCCGCCCGCCGCGGTCGCGCACCCCCTCGACGACGGCACCGCCGCGCTGCTCGGGCCGGGGTTCGAGGC
CACCGACGCGACGCTCGGCGAGGACGCCCGCGCCTGGCGGGCGCTGTTCGCGCCGCTCGCGCGGGAGCTCCCCGCGCTGC
TGGAGGAGGTGCTCGGTCCGGTGCTGCACCGCCCGCGGCGGCCGCTGCTGCTGGCGCGCTTCGGCCTGCCCGCGCTGCTC
CCGGCCGCGCGCCTCGCCCGCGCCCGGTTCCGCGGCCCGCGCGCGCGGGCGCTGTTCGCCGGCCTCGCCGCGCACGCGAA
CCGGCCCCTGGAGGCCGCCGCCAGCGCCGCCTTCGCGCTGGTGCTCGGCGCGGCCGGGCACGCCGTGGGCTGGCCGTTCC
CGGAGGGCGGCGCCGGCGCCATCGCGGCGGCGCTCGCCGCGGAGCTCCGGGCGCGCGGGGGCGAGCTCGCGACCTCGGCC
GAGGTGCACCGCCTCGAGGACCTCCCGCCGGCGCGCGCGGTGATGCTCGACCTCACGCCGCGGCAGGTGCTGCGGGTGGC
CGGGGCGCGGCTCCCGGCGCGCTACGCCCGGCGGCTCGCCGCGTTCCGCTACGGGCCCGGCGCCTTCAAGCTCGACTGGG
CGCTCGCCGGTCCCATCCCGTGGCGGGCCGCGGCCTGCGCCGTCGCCGGCACGGTGCACCTCGGCGGCACGCTGGAGGAG
ATCGCCGCCGCCGAGGCGGCCGTCGAGCGCGGCGAGGTGCCGGCGCGGCCGTTCGTGCTGCTCGCGCAGCCCACGCGCTT
CGACCCGTCGCGCGCGCCGCCCGGGGGACACGTGGCGTGGGCGTACTGCCACGTGCCGCGCGGGTTCGACGGGGACCTCA
CCGACGCGGTCGAGGCGCAGGTGGAGCGCTTCGCGCCCGGGTTCCGCGAGCTCGTGCTGGCCCGCGCCGTGCGCGGTCCG
CCGGCGCTCGAGCAGGAGGACGCGAACCTGGTCGGCGGGGACGTGGGCGGCGGGGAGGCGTCGCTCGCCCAGCTCGTCGC
CCGTCCGGTGCTGTCCCCCGACCCGTGGTCCACCCCCGTGCCCGGGCTCTACCTCTGCTCCGCCTCCACCCCGCCCGGCG
GGGGCGTCCACGGCATGTGCGGCTGGCAGGCCGCCCGCGCCGCCCTGCGCGACCTCGGCCTCTGA

Upstream 100 bases:

>100_bases
GTCGAAACGGGCCGCTCCGGTCGGGTGACCCGCGGTGGCGCCGACGCGCGTGCCCGGCCGCCCGGCTGCGCCGCCGGGGC
ACCGCCGCTAGGAGGGGGCG

Downstream 100 bases:

>100_bases
TCCCGACCCAGAGTCATTCTGGCACCGCTCATCCCGCTGCGCCGATCCGGACCCAGAGTCATTTCGCGCGGCGTCTGCGT
ACGGCCGGCGGACCCGGGGT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MRTPDAVVVGSGPNGLAAAVALGGAGLRVLVREAAATAGGGARTLPLTLPGFLHDHCSAVHPLAVASPFLRTLPLAAHGL
RWISPPAAVAHPLDDGTAALLGPGFEATDATLGEDARAWRALFAPLARELPALLEEVLGPVLHRPRRPLLLARFGLPALL
PAARLARARFRGPRARALFAGLAAHANRPLEAAASAAFALVLGAAGHAVGWPFPEGGAGAIAAALAAELRARGGELATSA
EVHRLEDLPPARAVMLDLTPRQVLRVAGARLPARYARRLAAFRYGPGAFKLDWALAGPIPWRAAACAVAGTVHLGGTLEE
IAAAEAAVERGEVPARPFVLLAQPTRFDPSRAPPGGHVAWAYCHVPRGFDGDLTDAVEAQVERFAPGFRELVLARAVRGP
PALEQEDANLVGGDVGGGEASLAQLVARPVLSPDPWSTPVPGLYLCSASTPPGGGVHGMCGWQAARAALRDLGL

Sequences:

>Translated_474_residues
MRTPDAVVVGSGPNGLAAAVALGGAGLRVLVREAAATAGGGARTLPLTLPGFLHDHCSAVHPLAVASPFLRTLPLAAHGL
RWISPPAAVAHPLDDGTAALLGPGFEATDATLGEDARAWRALFAPLARELPALLEEVLGPVLHRPRRPLLLARFGLPALL
PAARLARARFRGPRARALFAGLAAHANRPLEAAASAAFALVLGAAGHAVGWPFPEGGAGAIAAALAAELRARGGELATSA
EVHRLEDLPPARAVMLDLTPRQVLRVAGARLPARYARRLAAFRYGPGAFKLDWALAGPIPWRAAACAVAGTVHLGGTLEE
IAAAEAAVERGEVPARPFVLLAQPTRFDPSRAPPGGHVAWAYCHVPRGFDGDLTDAVEAQVERFAPGFRELVLARAVRGP
PALEQEDANLVGGDVGGGEASLAQLVARPVLSPDPWSTPVPGLYLCSASTPPGGGVHGMCGWQAARAALRDLGL
>Mature_474_residues
MRTPDAVVVGSGPNGLAAAVALGGAGLRVLVREAAATAGGGARTLPLTLPGFLHDHCSAVHPLAVASPFLRTLPLAAHGL
RWISPPAAVAHPLDDGTAALLGPGFEATDATLGEDARAWRALFAPLARELPALLEEVLGPVLHRPRRPLLLARFGLPALL
PAARLARARFRGPRARALFAGLAAHANRPLEAAASAAFALVLGAAGHAVGWPFPEGGAGAIAAALAAELRARGGELATSA
EVHRLEDLPPARAVMLDLTPRQVLRVAGARLPARYARRLAAFRYGPGAFKLDWALAGPIPWRAAACAVAGTVHLGGTLEE
IAAAEAAVERGEVPARPFVLLAQPTRFDPSRAPPGGHVAWAYCHVPRGFDGDLTDAVEAQVERFAPGFRELVLARAVRGP
PALEQEDANLVGGDVGGGEASLAQLVARPVLSPDPWSTPVPGLYLCSASTPPGGGVHGMCGWQAARAALRDLGL

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=558, Percent_Identity=28.1362007168459, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17540238, Length=538, Percent_Identity=23.6059479553903, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48757; Mature: 48757

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPDAVVVGSGPNGLAAAVALGGAGLRVLVREAAATAGGGARTLPLTLPGFLHDHCSAV
CCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHC
HPLAVASPFLRTLPLAAHGLRWISPPAAVAHPLDDGTAALLGPGFEATDATLGEDARAWR
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHH
ALFAPLARELPALLEEVLGPVLHRPRRPLLLARFGLPALLPAARLARARFRGPRARALFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHH
GLAAHANRPLEAAASAAFALVLGAAGHAVGWPFPEGGAGAIAAALAAELRARGGELATSA
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
EVHRLEDLPPARAVMLDLTPRQVLRVAGARLPARYARRLAAFRYGPGAFKLDWALAGPIP
HHHHHHCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCC
WRAAACAVAGTVHLGGTLEEIAAAEAAVERGEVPARPFVLLAQPTRFDPSRAPPGGHVAW
HHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEE
AYCHVPRGFDGDLTDAVEAQVERFAPGFRELVLARAVRGPPALEQEDANLVGGDVGGGEA
EEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHH
SLAQLVARPVLSPDPWSTPVPGLYLCSASTPPGGGVHGMCGWQAARAALRDLGL
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTPDAVVVGSGPNGLAAAVALGGAGLRVLVREAAATAGGGARTLPLTLPGFLHDHCSAV
CCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHC
HPLAVASPFLRTLPLAAHGLRWISPPAAVAHPLDDGTAALLGPGFEATDATLGEDARAWR
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHH
ALFAPLARELPALLEEVLGPVLHRPRRPLLLARFGLPALLPAARLARARFRGPRARALFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHH
GLAAHANRPLEAAASAAFALVLGAAGHAVGWPFPEGGAGAIAAALAAELRARGGELATSA
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
EVHRLEDLPPARAVMLDLTPRQVLRVAGARLPARYARRLAAFRYGPGAFKLDWALAGPIP
HHHHHHCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCC
WRAAACAVAGTVHLGGTLEEIAAAEAAVERGEVPARPFVLLAQPTRFDPSRAPPGGHVAW
HHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEE
AYCHVPRGFDGDLTDAVEAQVERFAPGFRELVLARAVRGPPALEQEDANLVGGDVGGGEA
EEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHH
SLAQLVARPVLSPDPWSTPVPGLYLCSASTPPGGGVHGMCGWQAARAALRDLGL
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]