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The map label for this gene is yfgC [C]

Identifier: 220915354

GI number: 220915354

Start: 247801

End: 248670

Strand: Reverse

Name: yfgC [C]

Synonym: A2cp1_0233

Alternate gene names: 220915354

Gene position: 248670-247801 (Counterclockwise)

Preceding gene: 220915359

Following gene: 220915349

Centisome position: 4.94

GC content: 71.26

Gene sequence:

>870_bases
ATGCACCGACCGTCTCGCACCCCGCTCCTCGCGCTCCTCTCGATCCTGGCGCTCGCCGGCTGCACCGGCAAGCAGCGCAT
CGCCACCGAGACCTCCATCGCCTCGGTGCTCATTCCGACCGAGCAGGAGAAGCAGCTCGGACTGCAGGTGAAGGAGCAGC
TCGAGACGAAGGAGCACGTCCAGTACCTCGAGGACCCGGCCGTGAACGCCTACGTCCAGGGCGTCACCGGCAAGATCCTG
GCGAGCGCCAAGAAGGAACGGCCGGACGTGGACTGGTCGGTGAAGGTCATCAACGACCCGAAGACGGTGAACGCGTTCGC
GACCCCGGGCGGCTTCCTGTACGTGTACTCCGGCCTGCTGCTCGCCGCCGACGACACCGCCGAGGTCGCCGGCGTGCTCG
GGCACGAGGCGGGGCACGTGGTGGCGCGCCACTCGGCCCGCCAGATGGTGAACGCCATGGGGCTCGAGACGGTCATGGGC
ATCGCGCTCGGGAAGAACCCGAACGGCGCGGCGCAGCTCGCGGCGGGGCTGGCCGGCAAGGGCACGCTGCTCGCGTACGG
GCGCGCCGACGAGAGCGAGGCCGACGAGTACGGGGCCCGCTACGCGGCCGCGGCCGGCTACGATCCGCACGGCATCGCCA
CGTTCTTCCAGAAGCTGGAGAAGGGCGAGGGCAAGCAGCCGGGCTGGACCACCTACCTCTCGACCCACCCGGCCACGCCG
GACCGGATCGAGAAGGTCGATCGCTACATCGCGGAGCACCACCTGACCGGCTTGGGCGGGCGGAGCGGCGCGGAGCTGGC
GAAGGTGAAGGAGCGGCTGAAGGCGATCCCGCCGCCGCCCGCGCCGCCGGCGCAGGGCGCGGGCAAGTAG

Upstream 100 bases:

>100_bases
CCGCGCCGCGCCCCGGGCCGATCAGGCTTCGCGCCGCACCCCCGTGCGGACGATGACCCCGCCCCGGGCCGGCGCTAGAA
GCGCGGCGGAGGGAACCGGC

Downstream 100 bases:

>100_bases
CGGCGATTACGCGCGCGGGCCGGACAGCCCCTTCGCGAGCTGCCACAGGCCGAACGCGAGCAGCGCCAGCCCGGAGATCG
CGGTGAGCGCGCGCTGGGTG

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MHRPSRTPLLALLSILALAGCTGKQRIATETSIASVLIPTEQEKQLGLQVKEQLETKEHVQYLEDPAVNAYVQGVTGKIL
ASAKKERPDVDWSVKVINDPKTVNAFATPGGFLYVYSGLLLAADDTAEVAGVLGHEAGHVVARHSARQMVNAMGLETVMG
IALGKNPNGAAQLAAGLAGKGTLLAYGRADESEADEYGARYAAAAGYDPHGIATFFQKLEKGEGKQPGWTTYLSTHPATP
DRIEKVDRYIAEHHLTGLGGRSGAELAKVKERLKAIPPPPAPPAQGAGK

Sequences:

>Translated_289_residues
MHRPSRTPLLALLSILALAGCTGKQRIATETSIASVLIPTEQEKQLGLQVKEQLETKEHVQYLEDPAVNAYVQGVTGKIL
ASAKKERPDVDWSVKVINDPKTVNAFATPGGFLYVYSGLLLAADDTAEVAGVLGHEAGHVVARHSARQMVNAMGLETVMG
IALGKNPNGAAQLAAGLAGKGTLLAYGRADESEADEYGARYAAAAGYDPHGIATFFQKLEKGEGKQPGWTTYLSTHPATP
DRIEKVDRYIAEHHLTGLGGRSGAELAKVKERLKAIPPPPAPPAQGAGK
>Mature_289_residues
MHRPSRTPLLALLSILALAGCTGKQRIATETSIASVLIPTEQEKQLGLQVKEQLETKEHVQYLEDPAVNAYVQGVTGKIL
ASAKKERPDVDWSVKVINDPKTVNAFATPGGFLYVYSGLLLAADDTAEVAGVLGHEAGHVVARHSARQMVNAMGLETVMG
IALGKNPNGAAQLAAGLAGKGTLLAYGRADESEADEYGARYAAAAGYDPHGIATFFQKLEKGEGKQPGWTTYLSTHPATP
DRIEKVDRYIAEHHLTGLGGRSGAELAKVKERLKAIPPPPAPPAQGAGK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=190, Percent_Identity=29.4736842105263, Blast_Score=88, Evalue=9e-18,
Organism=Escherichia coli, GI1788840, Length=214, Percent_Identity=27.5700934579439, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082185, Length=268, Percent_Identity=29.4776119402985, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081800, Length=166, Percent_Identity=30.7228915662651, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=196, Percent_Identity=29.5918367346939, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 30543; Mature: 30543

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRPSRTPLLALLSILALAGCTGKQRIATETSIASVLIPTEQEKQLGLQVKEQLETKEHV
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
QYLEDPAVNAYVQGVTGKILASAKKERPDVDWSVKVINDPKTVNAFATPGGFLYVYSGLL
HHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHCCEE
LAADDTAEVAGVLGHEAGHVVARHSARQMVNAMGLETVMGIALGKNPNGAAQLAAGLAGK
EECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
GTLLAYGRADESEADEYGARYAAAAGYDPHGIATFFQKLEKGEGKQPGWTTYLSTHPATP
CCEEEECCCCCCHHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
DRIEKVDRYIAEHHLTGLGGRSGAELAKVKERLKAIPPPPAPPAQGAGK
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHRPSRTPLLALLSILALAGCTGKQRIATETSIASVLIPTEQEKQLGLQVKEQLETKEHV
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
QYLEDPAVNAYVQGVTGKILASAKKERPDVDWSVKVINDPKTVNAFATPGGFLYVYSGLL
HHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHCCEE
LAADDTAEVAGVLGHEAGHVVARHSARQMVNAMGLETVMGIALGKNPNGAAQLAAGLAGK
EECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
GTLLAYGRADESEADEYGARYAAAAGYDPHGIATFFQKLEKGEGKQPGWTTYLSTHPATP
CCEEEECCCCCCHHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
DRIEKVDRYIAEHHLTGLGGRSGAELAKVKERLKAIPPPPAPPAQGAGK
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]