Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915346
Identifier: 220915346
GI number: 220915346
Start: 240632
End: 241321
Strand: Reverse
Name: 220915346
Synonym: A2cp1_0225
Alternate gene names: NA
Gene position: 241321-240632 (Counterclockwise)
Preceding gene: 220915347
Following gene: 220915345
Centisome position: 4.8
GC content: 80.14
Gene sequence:
>690_bases ATGCGCGCCGCCTTTGCAGCGGGGATGGCGCTGGCGGTCCTGGCGAGCTGCCGGACCGTCCAGACGCGGCAGGACTTCAC GCCGGTGTCCGACGCCGACTTCGGCCGGCTCGGGCCCGACCAGCTCGGGCCGGTGGGGCCGGCCCGCGCCGACGCGGCCG CCGCGCACGACGCGGTGGCCCGCGCCAAGCTGCGCCTGCAGGAGGCGAAGCGCGAGCAGGGCTACGCGGAGGCGGATCGC ACCGCCGCCGAGGCCGACCTGCAGCGCGCCGCCACCGAGGCGAAGGGCGCGAACTCGGCCGGCGACACCGCCTGGAAGGC GCGCGCCCAGGCGCTCGCCGACACCGCCGGGCTGCGCCGCCAGGCGGCCGACGCGCACCTCGTGTTCGCGAAGAGGCTGG CCGAGGCCCGCCAGGCGGATGTCGACGCCGCCGAGGCGCACGCCGACGCCGCGCAGGCGCGCCTGGAGCAGGCGAAGCTG CAGGCGCTCGCGAGGGCGGGCATCCCGGCCGCCGGCAAGTACGACGCGCGGCGCTTCGACGCGCACCTCGCGAAGGCGGT CGCCGCCGAGCGGGAGGCGCAGGCGCGCGCCGGGGAGACGGGGCGCGCCGCGGTGGCCGCCGAGGACGGCTGGCGGGCGC TGCAGCGGCGGTGGGAGGCGCGGAGCCAGGGGCGGGGCGGCACCGGGTAG
Upstream 100 bases:
>100_bases GGAGCCGGCGCGGCCCGGCGAGCCCGCCGACGAGGGCGAGTAGCGTCGGCGCGTGCCGCGCCCCACGCGCGGCCGCAGAT TTCCCGCCGGGGGAGTTGCC
Downstream 100 bases:
>100_bases CGACGGTCCCCGGCGGAGCCGTTGCGTTCGGGCGACGGGCGTGGTCTTCCGTGCGGCATGAAGGCCTTCGCCCGCTTCGC CTGGTCGGTGCTCGCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRAAFAAGMALAVLASCRTVQTRQDFTPVSDADFGRLGPDQLGPVGPARADAAAAHDAVARAKLRLQEAKREQGYAEADR TAAEADLQRAATEAKGANSAGDTAWKARAQALADTAGLRRQAADAHLVFAKRLAEARQADVDAAEAHADAAQARLEQAKL QALARAGIPAAGKYDARRFDAHLAKAVAAEREAQARAGETGRAAVAAEDGWRALQRRWEARSQGRGGTG
Sequences:
>Translated_229_residues MRAAFAAGMALAVLASCRTVQTRQDFTPVSDADFGRLGPDQLGPVGPARADAAAAHDAVARAKLRLQEAKREQGYAEADR TAAEADLQRAATEAKGANSAGDTAWKARAQALADTAGLRRQAADAHLVFAKRLAEARQADVDAAEAHADAAQARLEQAKL QALARAGIPAAGKYDARRFDAHLAKAVAAEREAQARAGETGRAAVAAEDGWRALQRRWEARSQGRGGTG >Mature_229_residues MRAAFAAGMALAVLASCRTVQTRQDFTPVSDADFGRLGPDQLGPVGPARADAAAAHDAVARAKLRLQEAKREQGYAEADR TAAEADLQRAATEAKGANSAGDTAWKARAQALADTAGLRRQAADAHLVFAKRLAEARQADVDAAEAHADAAQARLEQAKL QALARAGIPAAGKYDARRFDAHLAKAVAAEREAQARAGETGRAAVAAEDGWRALQRRWEARSQGRGGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23958; Mature: 23958
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAFAAGMALAVLASCRTVQTRQDFTPVSDADFGRLGPDQLGPVGPARADAAAAHDAVA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHH RAKLRLQEAKREQGYAEADRTAAEADLQRAATEAKGANSAGDTAWKARAQALADTAGLRR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QAADAHLVFAKRLAEARQADVDAAEAHADAAQARLEQAKLQALARAGIPAAGKYDARRFD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AHLAKAVAAEREAQARAGETGRAAVAAEDGWRALQRRWEARSQGRGGTG HHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRAAFAAGMALAVLASCRTVQTRQDFTPVSDADFGRLGPDQLGPVGPARADAAAAHDAVA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHH RAKLRLQEAKREQGYAEADRTAAEADLQRAATEAKGANSAGDTAWKARAQALADTAGLRR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QAADAHLVFAKRLAEARQADVDAAEAHADAAQARLEQAKLQALARAGIPAAGKYDARRFD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AHLAKAVAAEREAQARAGETGRAAVAAEDGWRALQRRWEARSQGRGGTG HHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA