Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915248
Identifier: 220915248
GI number: 220915248
Start: 143011
End: 144711
Strand: Reverse
Name: 220915248
Synonym: A2cp1_0127
Alternate gene names: NA
Gene position: 144711-143011 (Counterclockwise)
Preceding gene: 220915249
Following gene: 220915247
Centisome position: 2.88
GC content: 69.96
Gene sequence:
>1701_bases ATGCGAGCCACCCTCCTTGCGATTGCGCTTCTCCTCTCGACCGCTGCCCGCGCCGAGGAGGCGAAGCCCGCCCCGGCGCT GCCGGCCGACGCCGAGTCCTGCCTCATGTGCCACGACAAGGGCGGCGGCGCGCCCGAGGTCGACTTCAAGGCCTTCCCCG GCTCGGTCCACGGCCAGAACGAGGTGGGCTGCACCGACTGCCATGCCGGCTACAAGGAGGGCCCGCACGAGGGCGAGCTT CCCGCGCTCTCCGCCGCCGAGCAGGCGACCGTGGCGCGCCTGGCGAAGGGCGCCTGGGGCGAGGGCGAGGCGAAGCACGG CGTGACCGCGCCGCGCGCCTACCTCGCCTGCCAGAACTGCCACACCACCGAGGCCGAGGCGTTCGCGACGTCGGTCCACG GCAAGTGGCTCGCCGGCGACACCAGGGCGCCGGGCGCGACCTGCGCCTCCTGCCACGGTTCCCCGCACGCCATCCCGGCG AAGCTCGCCGAGTACGCGCCGAAGGACGGCAAGCGCGTGCCGGTGCCGGCCGACCGCCGCGAGATGACGAAGCGCTGCGA GGCCTGCCACGGGAACGAGGCGTTCGCCGAGGCCGCCGGGCTCGACCCGGAGGCGGTGATCACGTACCACGACTCGATCC ACGGCCGCCTGACGCGAGTCGGCAACGCGGCCGCGCCGACGTGCGTGAGCTGCCACGCGGCCGCGAAGGACGCGGGCGGC ACGCACGCGATCGTCTCGAAGACCGATCCGGCCTCCACGGTGAGCGCGGCCAACAAGAAGCAGGCGTGCGCGCGCTGCCA CGCCGGCGCGACCGACACGTTCGCCGGCCTGGTGGCCCACAAGCCGCTGCACGAGACCGGCGGGAGCGTCATCCCGCACA TCGTCCACGTGGCGTTCTCCTGGCTCACCACGCTCACGCTGCTGTTCTTCGCCTTCCACGTGCTGGTGGACTTCATCTAC GAGCTGCGCAGCCGGCTCGCGAAGAAGGCCGGCCACGGCCCGAGCGCCGACGCGATCCGCTCGGTGATCCGGTTCGACCT CCACCAGCGCATCCAGCACTGGTTCATGCTCTCGGGCGTCATCCTGCTCGGCATCACCGGCTGGCCGCTGCGCGGCGCCG GAGACGCCGAGGCGGCCGCCTACTCGCGCGCGTTCATGAAGGTGTTCGGCGGCGCGGAGGGCGCGGCGACCTGGCACCGG GTGGGCGCGGTGCTCATCATCATCTCGTCCGTCTACCACCTGTTCTACCTGACGTTCCTCGCCTCCAAGAAGCGGCTCCC GCTGTCGATGCTCCCCGTCCCGAAGGACGCGCTCGACATGCGCGACAACCTCCTCTTCATGATGGGCGTGAAGAAGGAGC GGCCGAAGTTCGACCGGTACATGTACCTGGAGAAGTTCGACTACTGGGCCGTGTTCTGGGGCATCGTGATGATGGTCGGC ACCGGGTTCATCTTCTGGTTCCCGGTCTGGTTCGCGAGCTGGGCGCCGGGCTGGCTCATCACCGCCGCGCAGATCATCCA TGGCGAGGAGGCGACGCTCGCCATCCTGTTCCTCTTCACGGTCCACTTCTACAACGTGCACCTGAAGCCCTCGATCTTCC CGATGAACTGGGCCTGGCTGAACGGGCGCATCTCGATCGAGGCGATGAAGCACGAGCATCCGCTGGAGTACGACCGGCTC AAGGACGAGCAGAACGGCTAG
Upstream 100 bases:
>100_bases CCGTCCCTTGACCTCACGCAAACCAGAGTCGTTTCCGCTGGTTGAGTCTTCGACCCGGCACAGGACCGGGGCACATCGGT TGCACACGCGGACCACGCCT
Downstream 100 bases:
>100_bases CCGGCCGCTCGCCGGCTCGAGCTGACGGGGGGGCCGCACGGGATGCCGTGCGGCCCCTTCCGTTTCCGGCGCCAGGCTCC GGGAAAACGGCGGAACGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome B Subunit Of Formate Dehydrogenase-Like Protein; Deca-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome-Like Protein; Cytochrome B/B6 Domain; Multiheme C-Type Cytochrome; Cytochrome B Subunit Of Formate Dehydrogenase-Like; Deca-Heme C-Type Cytochrome-Like; FfdnI Cytochromesubunit B Of Formate Dehydrogenase; Cytochrome C
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MRATLLAIALLLSTAARAEEAKPAPALPADAESCLMCHDKGGGAPEVDFKAFPGSVHGQNEVGCTDCHAGYKEGPHEGEL PALSAAEQATVARLAKGAWGEGEAKHGVTAPRAYLACQNCHTTEAEAFATSVHGKWLAGDTRAPGATCASCHGSPHAIPA KLAEYAPKDGKRVPVPADRREMTKRCEACHGNEAFAEAAGLDPEAVITYHDSIHGRLTRVGNAAAPTCVSCHAAAKDAGG THAIVSKTDPASTVSAANKKQACARCHAGATDTFAGLVAHKPLHETGGSVIPHIVHVAFSWLTTLTLLFFAFHVLVDFIY ELRSRLAKKAGHGPSADAIRSVIRFDLHQRIQHWFMLSGVILLGITGWPLRGAGDAEAAAYSRAFMKVFGGAEGAATWHR VGAVLIIISSVYHLFYLTFLASKKRLPLSMLPVPKDALDMRDNLLFMMGVKKERPKFDRYMYLEKFDYWAVFWGIVMMVG TGFIFWFPVWFASWAPGWLITAAQIIHGEEATLAILFLFTVHFYNVHLKPSIFPMNWAWLNGRISIEAMKHEHPLEYDRL KDEQNG
Sequences:
>Translated_566_residues MRATLLAIALLLSTAARAEEAKPAPALPADAESCLMCHDKGGGAPEVDFKAFPGSVHGQNEVGCTDCHAGYKEGPHEGEL PALSAAEQATVARLAKGAWGEGEAKHGVTAPRAYLACQNCHTTEAEAFATSVHGKWLAGDTRAPGATCASCHGSPHAIPA KLAEYAPKDGKRVPVPADRREMTKRCEACHGNEAFAEAAGLDPEAVITYHDSIHGRLTRVGNAAAPTCVSCHAAAKDAGG THAIVSKTDPASTVSAANKKQACARCHAGATDTFAGLVAHKPLHETGGSVIPHIVHVAFSWLTTLTLLFFAFHVLVDFIY ELRSRLAKKAGHGPSADAIRSVIRFDLHQRIQHWFMLSGVILLGITGWPLRGAGDAEAAAYSRAFMKVFGGAEGAATWHR VGAVLIIISSVYHLFYLTFLASKKRLPLSMLPVPKDALDMRDNLLFMMGVKKERPKFDRYMYLEKFDYWAVFWGIVMMVG TGFIFWFPVWFASWAPGWLITAAQIIHGEEATLAILFLFTVHFYNVHLKPSIFPMNWAWLNGRISIEAMKHEHPLEYDRL KDEQNG >Mature_566_residues MRATLLAIALLLSTAARAEEAKPAPALPADAESCLMCHDKGGGAPEVDFKAFPGSVHGQNEVGCTDCHAGYKEGPHEGEL PALSAAEQATVARLAKGAWGEGEAKHGVTAPRAYLACQNCHTTEAEAFATSVHGKWLAGDTRAPGATCASCHGSPHAIPA KLAEYAPKDGKRVPVPADRREMTKRCEACHGNEAFAEAAGLDPEAVITYHDSIHGRLTRVGNAAAPTCVSCHAAAKDAGG THAIVSKTDPASTVSAANKKQACARCHAGATDTFAGLVAHKPLHETGGSVIPHIVHVAFSWLTTLTLLFFAFHVLVDFIY ELRSRLAKKAGHGPSADAIRSVIRFDLHQRIQHWFMLSGVILLGITGWPLRGAGDAEAAAYSRAFMKVFGGAEGAATWHR VGAVLIIISSVYHLFYLTFLASKKRLPLSMLPVPKDALDMRDNLLFMMGVKKERPKFDRYMYLEKFDYWAVFWGIVMMVG TGFIFWFPVWFASWAPGWLITAAQIIHGEEATLAILFLFTVHFYNVHLKPSIFPMNWAWLNGRISIEAMKHEHPLEYDRL KDEQNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61464; Mature: 61464
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATLLAIALLLSTAARAEEAKPAPALPADAESCLMCHDKGGGAPEVDFKAFPGSVHGQN CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCC EVGCTDCHAGYKEGPHEGELPALSAAEQATVARLAKGAWGEGEAKHGVTAPRAYLACQNC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC HTTEAEAFATSVHGKWLAGDTRAPGATCASCHGSPHAIPAKLAEYAPKDGKRVPVPADRR CCCHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHH EMTKRCEACHGNEAFAEAAGLDPEAVITYHDSIHGRLTRVGNAAAPTCVSCHAAAKDAGG HHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHCCCCC THAIVSKTDPASTVSAANKKQACARCHAGATDTFAGLVAHKPLHETGGSVIPHIVHVAFS CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHH WLTTLTLLFFAFHVLVDFIYELRSRLAKKAGHGPSADAIRSVIRFDLHQRIQHWFMLSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILLGITGWPLRGAGDAEAAAYSRAFMKVFGGAEGAATWHRVGAVLIIISSVYHLFYLTFL HHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASKKRLPLSMLPVPKDALDMRDNLLFMMGVKKERPKFDRYMYLEKFDYWAVFWGIVMMVG HCCCCCCEEECCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TGFIFWFPVWFASWAPGWLITAAQIIHGEEATLAILFLFTVHFYNVHLKPSIFPMNWAWL HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCEECCEEEEE NGRISIEAMKHEHPLEYDRLKDEQNG CCEEEEEEECCCCCCCHHHCCCCCCC >Mature Secondary Structure MRATLLAIALLLSTAARAEEAKPAPALPADAESCLMCHDKGGGAPEVDFKAFPGSVHGQN CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCC EVGCTDCHAGYKEGPHEGELPALSAAEQATVARLAKGAWGEGEAKHGVTAPRAYLACQNC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC HTTEAEAFATSVHGKWLAGDTRAPGATCASCHGSPHAIPAKLAEYAPKDGKRVPVPADRR CCCHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHH EMTKRCEACHGNEAFAEAAGLDPEAVITYHDSIHGRLTRVGNAAAPTCVSCHAAAKDAGG HHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHCCCCC THAIVSKTDPASTVSAANKKQACARCHAGATDTFAGLVAHKPLHETGGSVIPHIVHVAFS CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHH WLTTLTLLFFAFHVLVDFIYELRSRLAKKAGHGPSADAIRSVIRFDLHQRIQHWFMLSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILLGITGWPLRGAGDAEAAAYSRAFMKVFGGAEGAATWHRVGAVLIIISSVYHLFYLTFL HHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASKKRLPLSMLPVPKDALDMRDNLLFMMGVKKERPKFDRYMYLEKFDYWAVFWGIVMMVG HCCCCCCEEECCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TGFIFWFPVWFASWAPGWLITAAQIIHGEEATLAILFLFTVHFYNVHLKPSIFPMNWAWL HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCEECCEEEEE NGRISIEAMKHEHPLEYDRLKDEQNG CCEEEEEEECCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA