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The map label for this gene is fadF [H]

Identifier: 220915131

GI number: 220915131

Start: 9583

End: 11718

Strand: Reverse

Name: fadF [H]

Synonym: A2cp1_0008

Alternate gene names: 220915131

Gene position: 11718-9583 (Counterclockwise)

Preceding gene: 220915132

Following gene: NA

Centisome position: 0.23

GC content: 72.99

Gene sequence:

>2136_bases
ATGAATCCAGCCCTCACCAGCGCGATGCTCCTCGTCGCGGCCGCGGTCTTCACCTTCACGATGACCCGCCGCGTCATGCC
GCTCTTCGCGCTGCGGCGCGACGTGCGCACCGACCGCCCGGGGGAGCGCATCCGGGCGCTCCTCCGCTTCGGCCTCGGCC
AGCGGCGCCTCGTCGATCCGGAGGAGCGCCGCCCGGGCCTGCTCCACGTCGTCATCTTCGCCGCGTTCCTGGTCCTCGCG
ATCCGCACCGTCACGATGTTCGGCATGGGCTTCTCGGCGGGCTTCCACCTGCCGCTGCTCGCGCCGGACTCCGGGCTGGG
CCGCGCCTACGGGCTGGTGAAGGACGTGATGGTGCTGCTCGCGCTGTTCGCGGTGCTGGGCTTCCTGTGGCGGCGCCTCG
TCACGCGGCCGGACCGGGTCACGCGCTCGACCGAGGGCGTGGTGATCCTGTTCTTCATCGCCGGCCTCATGATCACCGAC
GTCCTGTTCGACGGCGCGCTGCACCTGCTGCGCGAGGACCCGCTCGGCCTCGGCGACCTGCTCGCCGGCGCCGGCTTCGA
GCTCCCCGCGCCGCGCTTCGACTGGCTCGCGCCGGCCGGCTCGCTCGGCGCCGCGCTCTACCACGCGTCCGGCGCGTCGG
CCGGGACGGTGAGCGCGGTGGGCGAGGCGTCGTTCTGGCTCCACCTCGCGCTCATCCTCGTGTTCGGCAACGTGCTCCCC
TACGGCAAGCACTTCCACATCATCACCGGCCTGCCGAACGTGTTCTTCGCGCGGCTCCCGCCGGCGGGCGCGCTCCGCAA
GCTCGACCTCGAGGCGGAGGACGCGAGCTACGGCGCCGCCACGGTGAAGGACCTGTCGTGGAAGGAGGCGTGGGACGTCT
ACAGCTGCACCGAGTGCGGGCGCTGCCAGACCCACTGCCCGACCTACGTCACCGGCAAGCCGCTCAGCCACAAGGAGGTG
AACCGCTCCATCCGCCACCACCTCGCCGAGGTGGCGCCGGCGCTCACCGCGCTGGCGCGCGCGAAGGACCCCGCCGTCCG
CGAGGCGGCGGCCGGCGCCCTCCCGCCCATCTCCGAGGTGATCCCGCCGGAGACGTTCTGGGCCTGCACCACCTGCGGCT
GGTGCGAGACCGCCTGCCCGGTGCTCATCGAGAACGTGCCGCGCCTGGTGGACATGCGGCGGCAGGCGGTGCAGGTGGAC
TCGGTCTTCCCCGACGAGGCGCAGCGCGTGTTCAAGGGGATCGAGACGCAGGGCAACCCGTGGGGCATCGGCTCGAACAA
GCGCACCGAGTGGTGCGAGGACCTCGCGGTGCCGCGCGCCGCCGACGGCGGCGACTACGAGTGGCTGTTCTTCGTGGGCT
GCGCCGGCGCGTTCGACGACCGGCAGAAGAAGGTCTCGCGCGCCATCGTGCGGATCCTGCGCGAGGCGAAGGTGTCGTTC
GCGATCCTCGGCGAGGAGGAGACCTGCACCGGCGACGCCGCCCGGCGGCTCGGCAACGAGTACCTGTTCCAGATGCAGGC
CACCGCGCTCACCGAGACGCTGAACGGCCATGGGGTGAAGAAGATCCTGGTGCAGTGCCCGCACTGCCTCAACTCCATCG
CGAACGAGCTGCCGCAGTTCGGCGGCCGCTACGAGGTGGTGCACCACGCCGAGCTCATCGCGCGGCTGGTGAAGGACGGG
CGGCTCGCGCCCGGTGTGGCGGAGGGGCTCGGCCAGGTGACGTTCCACGACCCCTGCTACCTGGCGCGCTGGAACGGCGT
CACCGAGGCGCCGCGCGAGGCGCTCGCCGCGGCCGGCGTGCAGGTGGCGGAGATGCCGCGGAACCGCCGCCAGGGCTTCT
GCTGCGGCGCCGGCGGCGGCCGCTTCTGGCTGGAGGAGAAGCTCGGCGCCCGGGTGAACCAGAACCGGGTGGACGAGGCC
GCCGCCACGCTCGGCAAGGCGGGCGGCGTCATCGCCACCGGCTGCCCGTTCTGCCTCACCATGATGAAGGACGGCGTGAA
CGAGACCGGCCGCGAGGAGACGCTGCGGGTGCTGGACGTCGCCGAGATCGTGGCGCTCGGGCTGCCGAAGCGCGCCGAGT
CCGCGCCCGCGGCGGCGCCCGAGCACACCCCGGCCGCGCCGCAGGGCGAGGCCTAG

Upstream 100 bases:

>100_bases
CTTCCGGGAGGGCCGCCCTTCAGCCGGGCGGCCCTCTTCGTTCGTGGCACCTGACGGGTAACTTGCCCTCCCGCGCGGGA
CGCGGATAGCGTCCTGCGTC

Downstream 100 bases:

>100_bases
CCGGCGGGACGTGTCCCCCCGAACACCGCCGCGCAGGCATCGAGGCGCCGCCGCACCTCGGCCTCGAGCGCCTCGAGGTC
GTTGCCCGAGCGCGGGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 711

Protein sequence:

>711_residues
MNPALTSAMLLVAAAVFTFTMTRRVMPLFALRRDVRTDRPGERIRALLRFGLGQRRLVDPEERRPGLLHVVIFAAFLVLA
IRTVTMFGMGFSAGFHLPLLAPDSGLGRAYGLVKDVMVLLALFAVLGFLWRRLVTRPDRVTRSTEGVVILFFIAGLMITD
VLFDGALHLLREDPLGLGDLLAGAGFELPAPRFDWLAPAGSLGAALYHASGASAGTVSAVGEASFWLHLALILVFGNVLP
YGKHFHIITGLPNVFFARLPPAGALRKLDLEAEDASYGAATVKDLSWKEAWDVYSCTECGRCQTHCPTYVTGKPLSHKEV
NRSIRHHLAEVAPALTALARAKDPAVREAAAGALPPISEVIPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQVD
SVFPDEAQRVFKGIETQGNPWGIGSNKRTEWCEDLAVPRAADGGDYEWLFFVGCAGAFDDRQKKVSRAIVRILREAKVSF
AILGEEETCTGDAARRLGNEYLFQMQATALTETLNGHGVKKILVQCPHCLNSIANELPQFGGRYEVVHHAELIARLVKDG
RLAPGVAEGLGQVTFHDPCYLARWNGVTEAPREALAAAGVQVAEMPRNRRQGFCCGAGGGRFWLEEKLGARVNQNRVDEA
AATLGKAGGVIATGCPFCLTMMKDGVNETGREETLRVLDVAEIVALGLPKRAESAPAAAPEHTPAAPQGEA

Sequences:

>Translated_711_residues
MNPALTSAMLLVAAAVFTFTMTRRVMPLFALRRDVRTDRPGERIRALLRFGLGQRRLVDPEERRPGLLHVVIFAAFLVLA
IRTVTMFGMGFSAGFHLPLLAPDSGLGRAYGLVKDVMVLLALFAVLGFLWRRLVTRPDRVTRSTEGVVILFFIAGLMITD
VLFDGALHLLREDPLGLGDLLAGAGFELPAPRFDWLAPAGSLGAALYHASGASAGTVSAVGEASFWLHLALILVFGNVLP
YGKHFHIITGLPNVFFARLPPAGALRKLDLEAEDASYGAATVKDLSWKEAWDVYSCTECGRCQTHCPTYVTGKPLSHKEV
NRSIRHHLAEVAPALTALARAKDPAVREAAAGALPPISEVIPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQVD
SVFPDEAQRVFKGIETQGNPWGIGSNKRTEWCEDLAVPRAADGGDYEWLFFVGCAGAFDDRQKKVSRAIVRILREAKVSF
AILGEEETCTGDAARRLGNEYLFQMQATALTETLNGHGVKKILVQCPHCLNSIANELPQFGGRYEVVHHAELIARLVKDG
RLAPGVAEGLGQVTFHDPCYLARWNGVTEAPREALAAAGVQVAEMPRNRRQGFCCGAGGGRFWLEEKLGARVNQNRVDEA
AATLGKAGGVIATGCPFCLTMMKDGVNETGREETLRVLDVAEIVALGLPKRAESAPAAAPEHTPAAPQGEA
>Mature_711_residues
MNPALTSAMLLVAAAVFTFTMTRRVMPLFALRRDVRTDRPGERIRALLRFGLGQRRLVDPEERRPGLLHVVIFAAFLVLA
IRTVTMFGMGFSAGFHLPLLAPDSGLGRAYGLVKDVMVLLALFAVLGFLWRRLVTRPDRVTRSTEGVVILFFIAGLMITD
VLFDGALHLLREDPLGLGDLLAGAGFELPAPRFDWLAPAGSLGAALYHASGASAGTVSAVGEASFWLHLALILVFGNVLP
YGKHFHIITGLPNVFFARLPPAGALRKLDLEAEDASYGAATVKDLSWKEAWDVYSCTECGRCQTHCPTYVTGKPLSHKEV
NRSIRHHLAEVAPALTALARAKDPAVREAAAGALPPISEVIPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQVD
SVFPDEAQRVFKGIETQGNPWGIGSNKRTEWCEDLAVPRAADGGDYEWLFFVGCAGAFDDRQKKVSRAIVRILREAKVSF
AILGEEETCTGDAARRLGNEYLFQMQATALTETLNGHGVKKILVQCPHCLNSIANELPQFGGRYEVVHHAELIARLVKDG
RLAPGVAEGLGQVTFHDPCYLARWNGVTEAPREALAAAGVQVAEMPRNRRQGFCCGAGGGRFWLEEKLGARVNQNRVDEA
AATLGKAGGVIATGCPFCLTMMKDGVNETGREETLRVLDVAEIVALGLPKRAESAPAAAPEHTPAAPQGEA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 76978; Mature: 76978

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS50077 HEAT_REPEAT ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPALTSAMLLVAAAVFTFTMTRRVMPLFALRRDVRTDRPGERIRALLRFGLGQRRLVDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCH
EERRPGLLHVVIFAAFLVLAIRTVTMFGMGFSAGFHLPLLAPDSGLGRAYGLVKDVMVLL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
ALFAVLGFLWRRLVTRPDRVTRSTEGVVILFFIAGLMITDVLFDGALHLLREDPLGLGDL
HHHHHHHHHHHHHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LAGAGFELPAPRFDWLAPAGSLGAALYHASGASAGTVSAVGEASFWLHLALILVFGNVLP
HHCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
YGKHFHIITGLPNVFFARLPPAGALRKLDLEAEDASYGAATVKDLSWKEAWDVYSCTECG
CCCCEEEEECCCHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCC
RCQTHCPTYVTGKPLSHKEVNRSIRHHLAEVAPALTALARAKDPAVREAAAGALPPISEV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHH
IPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQVDSVFPDEAQRVFKGIETQGNP
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
WGIGSNKRTEWCEDLAVPRAADGGDYEWLFFVGCAGAFDDRQKKVSRAIVRILREAKVSF
CCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEE
AILGEEETCTGDAARRLGNEYLFQMQATALTETLNGHGVKKILVQCPHCLNSIANELPQF
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHC
GGRYEVVHHAELIARLVKDGRLAPGVAEGLGQVTFHDPCYLARWNGVTEAPREALAAAGV
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEECCCEEEEECCCCCHHHHHHHHHCCC
QVAEMPRNRRQGFCCGAGGGRFWLEEKLGARVNQNRVDEAAATLGKAGGVIATGCPFCLT
HHHHCCCHHCCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHH
MMKDGVNETGREETLRVLDVAEIVALGLPKRAESAPAAAPEHTPAAPQGEA
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPALTSAMLLVAAAVFTFTMTRRVMPLFALRRDVRTDRPGERIRALLRFGLGQRRLVDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCH
EERRPGLLHVVIFAAFLVLAIRTVTMFGMGFSAGFHLPLLAPDSGLGRAYGLVKDVMVLL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
ALFAVLGFLWRRLVTRPDRVTRSTEGVVILFFIAGLMITDVLFDGALHLLREDPLGLGDL
HHHHHHHHHHHHHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LAGAGFELPAPRFDWLAPAGSLGAALYHASGASAGTVSAVGEASFWLHLALILVFGNVLP
HHCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
YGKHFHIITGLPNVFFARLPPAGALRKLDLEAEDASYGAATVKDLSWKEAWDVYSCTECG
CCCCEEEEECCCHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCC
RCQTHCPTYVTGKPLSHKEVNRSIRHHLAEVAPALTALARAKDPAVREAAAGALPPISEV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHH
IPPETFWACTTCGWCETACPVLIENVPRLVDMRRQAVQVDSVFPDEAQRVFKGIETQGNP
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
WGIGSNKRTEWCEDLAVPRAADGGDYEWLFFVGCAGAFDDRQKKVSRAIVRILREAKVSF
CCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEE
AILGEEETCTGDAARRLGNEYLFQMQATALTETLNGHGVKKILVQCPHCLNSIANELPQF
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHC
GGRYEVVHHAELIARLVKDGRLAPGVAEGLGQVTFHDPCYLARWNGVTEAPREALAAAGV
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEECCCEEEEECCCCCHHHHHHHHHCCC
QVAEMPRNRRQGFCCGAGGGRFWLEEKLGARVNQNRVDEAAATLGKAGGVIATGCPFCLT
HHHHCCCHHCCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHH
MMKDGVNETGREETLRVLDVAEIVALGLPKRAESAPAAAPEHTPAAPQGEA
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]