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The map label for this gene is 220914949

Identifier: 220914949

GI number: 220914949

Start: 329659

End: 330075

Strand: Reverse

Name: 220914949

Synonym: Mnod_8106

Alternate gene names: NA

Gene position: 330075-329659 (Counterclockwise)

Preceding gene: 220914950

Following gene: 220914948

Centisome position: 72.06

GC content: 61.15

Gene sequence:

>417_bases
GTGGCAAGCCCTCGTTTCATGCTCGACACCAACATCTGCATCTTCCTGCGCAGGCAGAAATCGGCTTCCGTAACGGCCCG
GTTCGCCGCCCTCCAGCCGGGAGAGGCAGCCATGTCGATCATCACCTACGGGGAGCAACTCTACGGGGCCGAAAAGAGCC
AGGATCGCGCCAAGGCGATCGCACTCATCCAGCGGATCGCCGGGATGATCCCGGTCTTACCGATGGCGGTCGGGGTTGCA
GACTTCTATGGGAAGATCCGCAGCGACCTCGAAGAGAAGGGGCTCACAATCGGCAATAACGACCTCTGGATTGCCGCCCA
CGCGCTTCACGAGAACCTAATCCTCGTGACCAACAACCGACGCGAGTTCGACCGGGTAGGGATGGGACTTCAGGTCGAGG
ACTGGACGCAGCCCTGA

Upstream 100 bases:

>100_bases
AGCCGAAGAACATGCTGGACGCTTTGGCGTTGTTCCGGGAGCTTCCAGACGACATGGGCGATCGGGAAGACACCCCGCCT
CAAGCGCGCGAGGGCCTGTA

Downstream 100 bases:

>100_bases
GCGGGGCTTGTCACGTCGCCGGACGCGGCCGCAGGAATACCTACGCAGCTCAGCTTCAGGCCGCCACGTTTTGAACGCCT
CGGCTCGGAAGAGCCGGTAC

Product: PilT protein domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MASPRFMLDTNICIFLRRQKSASVTARFAALQPGEAAMSIITYGEQLYGAEKSQDRAKAIALIQRIAGMIPVLPMAVGVA
DFYGKIRSDLEEKGLTIGNNDLWIAAHALHENLILVTNNRREFDRVGMGLQVEDWTQP

Sequences:

>Translated_138_residues
MASPRFMLDTNICIFLRRQKSASVTARFAALQPGEAAMSIITYGEQLYGAEKSQDRAKAIALIQRIAGMIPVLPMAVGVA
DFYGKIRSDLEEKGLTIGNNDLWIAAHALHENLILVTNNRREFDRVGMGLQVEDWTQP
>Mature_137_residues
ASPRFMLDTNICIFLRRQKSASVTARFAALQPGEAAMSIITYGEQLYGAEKSQDRAKAIALIQRIAGMIPVLPMAVGVAD
FYGKIRSDLEEKGLTIGNNDLWIAAHALHENLILVTNNRREFDRVGMGLQVEDWTQP

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15320; Mature: 15189

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPRFMLDTNICIFLRRQKSASVTARFAALQPGEAAMSIITYGEQLYGAEKSQDRAKAI
CCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
ALIQRIAGMIPVLPMAVGVADFYGKIRSDLEEKGLTIGNNDLWIAAHALHENLILVTNNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCEEEEECCC
REFDRVGMGLQVEDWTQP
CHHHHHCCCCEECCCCCC
>Mature Secondary Structure 
ASPRFMLDTNICIFLRRQKSASVTARFAALQPGEAAMSIITYGEQLYGAEKSQDRAKAI
CCCCEEEECCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
ALIQRIAGMIPVLPMAVGVADFYGKIRSDLEEKGLTIGNNDLWIAAHALHENLILVTNNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCEEEEECCC
REFDRVGMGLQVEDWTQP
CHHHHHCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]