Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 220905930

GI number:

Start: 288567

End: 291866

Strand: Reverse

Name: rpoB

Synonym: Cyan7425_0488

Alternate gene names: NA

Gene position: NA

Preceding gene: 220905931

Following gene: 220905929

Centisome position: NA

GC content: NA

Gene sequence:

>3300_bases
ATGACTAATACGATTTATACCCCACCCGCCTTTACTCTCCCTGACCTGGTTGAGATTCAGCGGGAGAGCTTCCGTTGGTT
CCTGGAAGAAGGATTAATTGAGGAACTCGAAAGTTTTTCACCTATTACTGACTATACAGGCAAAATTGAACTACACATCC
TGGCGAAGGACTATAAGCTCAAGCGTCCCAAGTACAGCGTCGATGAAGCCAAGCGCCGAGACAGCACCTATGCTGTGCAA
ATGTACGTTCCGACGCGTCTGATCAATAAAGAAACTGGGGAAATTAAAGAGCAGGACGTTTTCATCGGTGATCTTCCCCT
CATGACCGATCGGGGCACCTTCATTATCAACGGTGCTGAACGGGTGATCGTCAACCAGATCGTCCGTAGCCCTGGGGTGT
ATTACAAGTCAGAAGTCGATAAAAATGGTCGGCGCACTTACAATGCCAGCCTGATTCCCAACCGGGGAGCCTGGTTAAAG
TTTGAAACTGACAAAAATGACCTGGTTTGGGTGCGGATTGATAAAACCCGTAAACTGTCTGCTCAGGTTTTACTGAAGGC
TCTGGGGCTGAGTGATGCAGAAATTTTTGACCGACTGCGCCACCCCGAATACTACCAAAAAACGATCGACAAGGAAGGGC
AGTTCAACGAAGAAGATGCCCTGATGGAGCTTTACCGCAAATTGCGTCCCGGTGAACCTCCCACGGTGTCTGGGGGGCAG
CAATTGCTAGACTCCCGCTTTTTTGACCCTAAACGCTACGACCTGGGCCGGGTGGGTCGTTACAAGCTGAACAAGAAATT
GCGGCTGAATGTCCCCGAAACCACGCGGGTACTCACCTCTGAAGATATTCTGGCGGCGATCGACTACCTGATCAACCTGG
AATACGACATCGGCATGATTGACGACATTGACCACCTGGGTAACCGCCGGGTGCGCTCTGTCGGTGAACTGCTGCAAAAT
CAGGTGCGGGTGGGCTTAAATCGGTTAGAGCGGATTATTCGGGAGCGTATGACGGTTTCCGATACGGATGCCCTCACCCC
TGCTTCTCTGGTCAACCCCAAACCCCTGGTCGCTGCGATCAAAGAATTCTTTGGCTCCAGCCAGTTGTCCCAGTTCATGG
ATCAAACCAATCCGCTGGCAGAATTGACTCACAAACGTCGTCTCAGTGCGCTTGGTCCTGGCGGTCTGACGCGGGAACGG
GCAGGCTTTGCGGTACGGGATATTCACCCCAGCCATTATGGGCGGATCTGTCCGATTGAAACCCCAGAAGGTCCCAACGC
TGGCTTGATCGGCTCTCTGGCAACCCATGCTCGCGTCAACGAGTACGGCTTTATTGAAACCCCTTTCTATCCGGTTAAAG
ATGGACGGGTGCTCAAGGATCAAGCCCCGGTTTACATGACTGCGGATGAAGAAGATGACAAACGGGTAGCTCCTGGGGAT
GTTTCCACCGATGCCGATGGCCATATTCTCGGTGAAGTGGTACCTGTGCGCTATCGACGGGACTTTACCACCACCACCCC
GGATCAGGTGGATTTTGTCGCCGTTTCCCCGGTGCAGATTATCTCTGTTGCCACCTCTCTGATTCCCTTCCTGGAGCACG
ACGATGCCAACCGGGCCCTGATGGGTTCCAACATGCAACGGCAGGCCGTACCTCTACTGCGTCCCCACCGTCCTCTCGTT
GGAACGGGCTTGGAAGCTCAGGCAGCGCGTGACTCCGGCATGGTGGTGACTACCCGATCGGATGGAGAAGTGAGCTATGT
TTCAGCGGATGTAATTCGAGTTCGCGCTACTCAGGGGCATGAAATTGAATATCCGTTGCAAAAATACCAGCGATCGAACC
AGGATACCTGTCTGAACCAGCGCCCGATCGTCTTTGCCGGTGACAAGGTCACAGCCGGCCAGGTCATTGCTGACGGTTCT
GCTACCGAAGGCGGTGAACTTGCCCTGGGTCAGAACGTCCTGATCGCTTATATGCCCTGGGAAGGCTACAACTACGAAGA
TGCCATTCTGATCAGTGAGCGTCTGGTCTACGATGATGTCTACACCTCAATCCACGTGGAAAAATATGAGATTGAGGCCC
GGCAGACCAAACTAGGACCAGAAGAAATTACACGGGAAATTCCCAACGTTGGGGAAGATGCCCTGCGCCAACTGAACGAA
AACGGCATTATCCGGACTGGAGCCTGGGTGGAAGCTGGAGACATTCTGGTCGGCAAAGTGACCCCCAAAGGGGAATCAGA
TCAGCCTCCGGAAGAAAAATTGCTGCGAGCGATCTTCGGTGAAAAGGCCCGGGACGTGCGGGATAACTCCCTACGAGTGC
CCAACGGTGAAAAAGGCCGGGTGGTGGATGTGCGGGTGTTTACCCGGGAACAGGGGGATGAACTACCACCGGGAGCCAAC
ATGGTGGTGCGAGTCTACGTCGCCCAAAAACGCAAGATCCAGGTTGGGGACAAGATGGCGGGTCGCCACGGTAATAAGGG
GATTATCTCCAGGATTCTGCCCCAGGAAGATATGCCCTACCTGCCAGATGGCACGCCCGTCGATGTGGTGTTGAACCCCC
TGGGGGTACCCTCGCGGATGAATGTCGGCCAGGTGTTCGAGTGTTTGCTCGGTTGGGCCGGTTATCATCTGGGAGCCCGG
TTTAAGATCACGCCCTTTGATGAAATGCACGGGGCCGAAGCCTCTCGCCTCACTGTTCACGGCAAGCTGGATGAAGCCAA
AGAACTCACCGGGCGGGATTGGGTGTTTGATCCAGACAATCCTGGTAAAACTCAAATTTTTGATGGTCGTACGGGAGAAG
CTTTCGATCGCCCGGTCACGGTTGGCAAAGCCTACATGCTCAAACTCGTCCACCTGGTAGATGACAAGATCCATGCCCGT
TCAACTGGTCCCTACTCGCTGGTGACTCAGCAACCTCTGGGTGGTAAAGCCCAACAGGGGGGTCAGCGGTTCGGAGAAAT
GGAAGTCTGGGCCCTGGAAGCCTACGGAGCTGCCTACACCCTGCAGGAACTGCTAACGGTGAAATCCGATGATATGCAGG
GTCGCAACGAAGCGCTCAATGCGATCGTCAAAGGTCAGGCCATTCCCCGCCCCGGCACACCCGAGTCCTTTAAGGTGCTG
ATGCGAGAGTTGCAATCCCTCTGTCTGGATATTGGGGTACACAAAGTTGAAGCTACGGAAGATGGTAGCAACCGGGATGT
GGAAGTGGATTTGATGGCCGATGTCAACAATCGCCGTACCCCCTCCCGTCCCACCTACGAATCCTTCTCCAGAGCTGATA
TGGAGGATGGAGATTTTTAA

Upstream 100 bases:

>100_bases
GCTAAGCCAAGTGCAGCCAGGGGCTTATTGGCTTGACATTAACCGTGCCAATGATTTACACTGTAAGACCCGCGCCAAGC
GTGACCTCTAGAGGAGACGC

Downstream 100 bases:

>100_bases
GCCGGGGCTGCGTGGGAATGGTCTGCTCGACTCTGGCTACCCCCCTGCGGTTAACTTCTGATGCGGTTAACCTCAGCCCC
AACCCCTACAGGCAATTAAA

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1099_residues
MTNTIYTPPAFTLPDLVEIQRESFRWFLEEGLIEELESFSPITDYTGKIELHILAKDYKLKRPKYSVDEAKRRDSTYAVQ
MYVPTRLINKETGEIKEQDVFIGDLPLMTDRGTFIINGAERVIVNQIVRSPGVYYKSEVDKNGRRTYNASLIPNRGAWLK
FETDKNDLVWVRIDKTRKLSAQVLLKALGLSDAEIFDRLRHPEYYQKTIDKEGQFNEEDALMELYRKLRPGEPPTVSGGQ
QLLDSRFFDPKRYDLGRVGRYKLNKKLRLNVPETTRVLTSEDILAAIDYLINLEYDIGMIDDIDHLGNRRVRSVGELLQN
QVRVGLNRLERIIRERMTVSDTDALTPASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRER
AGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLATHARVNEYGFIETPFYPVKDGRVLKDQAPVYMTADEEDDKRVAPGD
VSTDADGHILGEVVPVRYRRDFTTTTPDQVDFVAVSPVQIISVATSLIPFLEHDDANRALMGSNMQRQAVPLLRPHRPLV
GTGLEAQAARDSGMVVTTRSDGEVSYVSADVIRVRATQGHEIEYPLQKYQRSNQDTCLNQRPIVFAGDKVTAGQVIADGS
ATEGGELALGQNVLIAYMPWEGYNYEDAILISERLVYDDVYTSIHVEKYEIEARQTKLGPEEITREIPNVGEDALRQLNE
NGIIRTGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVDVRVFTREQGDELPPGAN
MVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPQEDMPYLPDGTPVDVVLNPLGVPSRMNVGQVFECLLGWAGYHLGAR
FKITPFDEMHGAEASRLTVHGKLDEAKELTGRDWVFDPDNPGKTQIFDGRTGEAFDRPVTVGKAYMLKLVHLVDDKIHAR
STGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNEALNAIVKGQAIPRPGTPESFKVL
MRELQSLCLDIGVHKVEATEDGSNRDVEVDLMADVNNRRTPSRPTYESFSRADMEDGDF

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA