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The map label for this gene is dsvB [H]

Identifier: 220905555

GI number: 220905555

Start: 2761523

End: 2762668

Strand: Reverse

Name: dsvB [H]

Synonym: Ddes_2294

Alternate gene names: 220905555

Gene position: 2762668-2761523 (Counterclockwise)

Preceding gene: 220905556

Following gene: 220905554

Centisome position: 96.15

GC content: 60.21

Gene sequence:

>1146_bases
ATGGCATTTATTTCTTCCGGGTACAATCCCGCAAAACCGATGGAAGGCCGTATCACTGACATCGGCCCCCACAAGTATGA
TGAATACTTTCCGCCGATCATCAAAAACAACTTCGGCAAGTGGCTCTATCATGAGATTCTTGAGCCGGGCGTGCTGCTGC
ACGTGGCCGAAAGCGGCGACAAGTGCTACACCGTCCGCGTGGGCGGCACCCGCACCATGTCCATCACGCTGATCCGTGAA
CTGTGCGACATCGCCGACAAGTACTGCGGCGGCTACCTGCGCTGGACCACGCGTAACAACATTGAATTCATGGTGGACAG
CGAAGACGGCATGAAGGCCCTGCGCGATGACCTGAACAGCCGCAAGTTTGACGGCGGCTCGTTCAAGTTCCCCGTGGGCG
GCACCGGCGCCGGCATCAGCAACATGGTGCACACCCAGGGCTGGGTGCACTGTCATACGCCTGCCACCGACGCCTCCGGC
CCGGTCAAGGCTGTGATGGACGTTGTGTTTGAGGACTTTAAGTCCATGCGTCTGCCCGCCCCCGTGCGCATAGCCCTGGC
CTGCTGCATCAACATGTGCGGCGCGGTGCACTGTTCCGACATCGGCCTTGTGGGTATCCACCGCAAGCCGCCCATGATCG
ACCACGAGTGGACCGACCAGCTGTGCGAAATTCCCCTGGCCGTGGCCGCTTGCCCCACTGCCGCCGTGCGCCCCACCAAG
GTGGAGCTTGACGGCAAGAAGGTGAACTCCATCGCCATCAAGAACGAACGCTGCATGTACTGCGGTAACTGCTACACCAT
GTGCCCTGCGCTGCCCATCTCGGACGGCGAAGGCGACGGCATTGCCATCATGGTGGGCGGCAAGGTTTCCAACCGCATCA
GCATGCCCAAGTTCTCCAAGGTCGTTGTGGGCTACATCCCCAACGAACCGCCCCGCTGGCCTTCGCTGACCAAGACCGTG
AAGCACATCGTTGAAGTGTACGCGGCCAATGCCAACAAGTACGAACGCCTGGGCGACTGGGCCGAGCGCATCGGCTGGGA
AACTTTCTTCAAGATGACCGGCCTTGAGTTCACCCACCACCTTATCGACGACTTCCGTGACCCTGCCTACTACACCTGGC
GGCAGAGCACGCAGTTCAAGTTCTAG

Upstream 100 bases:

>100_bases
GTACATCTTCTTCAAGGAAGAAGAAGTTACCGGTGGCTGGGACCGTGACCTCGCCGCTTACCGCAAACGCCATCAACGCT
AGTCAAAGGGGGAGAAAAAC

Downstream 100 bases:

>100_bases
GACTATCTTGTTTAACCCCGGCGGCGCTGATGCGCCGCCGGGACAGGAGAATCACCATGGCTGACGACAAAGATATTGTT
GTTGATTTTCTGAACAGCAA

Product: sulfite reductase, dissimilatory-type beta subunit

Products: NA

Alternate protein names: Desulfoviridin subunit beta; Hydrogensulfite reductase subunit beta [H]

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAFISSGYNPAKPMEGRITDIGPHKYDEYFPPIIKNNFGKWLYHEILEPGVLLHVAESGDKCYTVRVGGTRTMSITLIRE
LCDIADKYCGGYLRWTTRNNIEFMVDSEDGMKALRDDLNSRKFDGGSFKFPVGGTGAGISNMVHTQGWVHCHTPATDASG
PVKAVMDVVFEDFKSMRLPAPVRIALACCINMCGAVHCSDIGLVGIHRKPPMIDHEWTDQLCEIPLAVAACPTAAVRPTK
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGIAIMVGGKVSNRISMPKFSKVVVGYIPNEPPRWPSLTKTV
KHIVEVYAANANKYERLGDWAERIGWETFFKMTGLEFTHHLIDDFRDPAYYTWRQSTQFKF

Sequences:

>Translated_381_residues
MAFISSGYNPAKPMEGRITDIGPHKYDEYFPPIIKNNFGKWLYHEILEPGVLLHVAESGDKCYTVRVGGTRTMSITLIRE
LCDIADKYCGGYLRWTTRNNIEFMVDSEDGMKALRDDLNSRKFDGGSFKFPVGGTGAGISNMVHTQGWVHCHTPATDASG
PVKAVMDVVFEDFKSMRLPAPVRIALACCINMCGAVHCSDIGLVGIHRKPPMIDHEWTDQLCEIPLAVAACPTAAVRPTK
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGIAIMVGGKVSNRISMPKFSKVVVGYIPNEPPRWPSLTKTV
KHIVEVYAANANKYERLGDWAERIGWETFFKMTGLEFTHHLIDDFRDPAYYTWRQSTQFKF
>Mature_380_residues
AFISSGYNPAKPMEGRITDIGPHKYDEYFPPIIKNNFGKWLYHEILEPGVLLHVAESGDKCYTVRVGGTRTMSITLIREL
CDIADKYCGGYLRWTTRNNIEFMVDSEDGMKALRDDLNSRKFDGGSFKFPVGGTGAGISNMVHTQGWVHCHTPATDASGP
VKAVMDVVFEDFKSMRLPAPVRIALACCINMCGAVHCSDIGLVGIHRKPPMIDHEWTDQLCEIPLAVAACPTAAVRPTKV
ELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGIAIMVGGKVSNRISMPKFSKVVVGYIPNEPPRWPSLTKTVK
HIVEVYAANANKYERLGDWAERIGWETFFKMTGLEFTHHLIDDFRDPAYYTWRQSTQFKF

Specific function: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria [H]

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011808
- InterPro:   IPR005117
- InterPro:   IPR006067 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.8.99.3 [H]

Molecular weight: Translated: 42550; Mature: 42419

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFISSGYNPAKPMEGRITDIGPHKYDEYFPPIIKNNFGKWLYHEILEPGVLLHVAESGD
CCCCCCCCCCCCCCCCCEECCCCCCCHHHCCCHHHCCCHHHHHHHHCCCCEEEEEECCCC
KCYTVRVGGTRTMSITLIRELCDIADKYCGGYLRWTTRNNIEFMVDSEDGMKALRDDLNS
EEEEEEECCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHHC
RKFDGGSFKFPVGGTGAGISNMVHTQGWVHCHTPATDASGPVKAVMDVVFEDFKSMRLPA
CCCCCCCEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
PVRIALACCINMCGAVHCSDIGLVGIHRKPPMIDHEWTDQLCEIPLAVAACPTAAVRPTK
HHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCEE
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGIAIMVGGKVSNRISMPKFSK
EEECCCEEEEEEEECCCEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
VVVGYIPNEPPRWPSLTKTVKHIVEVYAANANKYERLGDWAERIGWETFFKMTGLEFTHH
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCHHHHHH
LIDDFRDPAYYTWRQSTQFKF
HHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
AFISSGYNPAKPMEGRITDIGPHKYDEYFPPIIKNNFGKWLYHEILEPGVLLHVAESGD
CCCCCCCCCCCCCCCCEECCCCCCCHHHCCCHHHCCCHHHHHHHHCCCCEEEEEECCCC
KCYTVRVGGTRTMSITLIRELCDIADKYCGGYLRWTTRNNIEFMVDSEDGMKALRDDLNS
EEEEEEECCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHHC
RKFDGGSFKFPVGGTGAGISNMVHTQGWVHCHTPATDASGPVKAVMDVVFEDFKSMRLPA
CCCCCCCEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
PVRIALACCINMCGAVHCSDIGLVGIHRKPPMIDHEWTDQLCEIPLAVAACPTAAVRPTK
HHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCEE
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGIAIMVGGKVSNRISMPKFSK
EEECCCEEEEEEEECCCEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
VVVGYIPNEPPRWPSLTKTVKHIVEVYAANANKYERLGDWAERIGWETFFKMTGLEFTHH
EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCHHHHHH
LIDDFRDPAYYTWRQSTQFKF
HHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7887608; 1555572 [H]