Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905471
Identifier: 220905471
GI number: 220905471
Start: 2664775
End: 2665461
Strand: Reverse
Name: 220905471
Synonym: Ddes_2209
Alternate gene names: NA
Gene position: 2665461-2664775 (Counterclockwise)
Preceding gene: 220905472
Following gene: 220905467
Centisome position: 92.76
GC content: 61.72
Gene sequence:
>687_bases ATGACCAGCAAAGGCAAGGTTGTCGCCATAGTACAGGCCCGGCTGGGTTCAAGCCGCCTGCCGCTGAAATCCCTGCTCTG CCTGCGTGATCTGCCGGTTATCGATTGGGTGGCGCGCCGCCTTGCCGCGGCAAGCCGTCTGGATGGCATCATGGTGGCCG TGCCCGATACTCCGCTGGATGTGGTGCTGCTGGAGCACCTGCGCCGCCGGGGCATACCCTGCATGGCCGGGCCGGAAGAC GATGTGCTGGCGCGTTTTTGCCAGGCGGCGAAACTGGCAGATGCCGGGCTTGTGGTGCGCGTATGTGCAGACAACCCCCT TATCTGGGGCGGTGCCGTGGACAGGCTGGTGGATTTTTACTGCGCGGGCCGGTGGGATTACGCCTATAACCACATTCCAC GCAACAATCTCTGGCCGGACGGGCTTGGGGCAGAGGTGCTTTCGCGCGAGCTGCTTGAGAGCCTGGACCAGAAGGCCGTG GAGCCTTCGCAGCGCGAGCACTGCCTCAACTATATATGGGACAATGCCAAAAAATTCCGCATCGGTACATTTGACCCCGA TGAGGAATGGCTGTGCCGCCCGGATCTGCGGCTGGATATGGACAGGCCCGACGATTTCCGCCGTCTGGCACTGCGCCCCA TCAGCCCTGATATGGACGCGAGAGCCATTGTGGATATTTTTGGCTAG
Upstream 100 bases:
>100_bases CTTCGGGCAGACAATATTGTCTCAAGGGTACGCTGTTCCAGATGCAGGGCGCCATGCCGTTCAGGAATACCCACTATCGC CGGACACGGCGGAGGAAAAT
Downstream 100 bases:
>100_bases AGCAATTAACGCTTCAAATGATTGTTTAACGATCGGCGAAGCCGCCCTATAATCATTTGGCGACAAGAAATTGGAGACAA ATCCTTGTAGGGCATTTCAA
Product: acylneuraminate cytidylyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLDVVLLEHLRRRGIPCMAGPED DVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFYCAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAV EPSQREHCLNYIWDNAKKFRIGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG
Sequences:
>Translated_228_residues MTSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLDVVLLEHLRRRGIPCMAGPED DVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFYCAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAV EPSQREHCLNYIWDNAKKFRIGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG >Mature_227_residues TSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLDVVLLEHLRRRGIPCMAGPEDD VLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFYCAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAVE PSQREHCLNYIWDNAKKFRIGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG
Specific function: Unknown
COG id: COG1861
COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003329 [H]
Pfam domain/function: PF02348 CTP_transf_3 [H]
EC number: NA
Molecular weight: Translated: 25687; Mature: 25556
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLD CCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH VVLLEHLRRRGIPCMAGPEDDVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFY HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECHHHHHHHHHH CAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAVEPSQREHCLNYIWDNAKKFR HCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEE IGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG ECCCCCCCCCEECCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHEECC >Mature Secondary Structure TSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLD CCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH VVLLEHLRRRGIPCMAGPEDDVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFY HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECHHHHHHHHHH CAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAVEPSQREHCLNYIWDNAKKFR HCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEE IGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG ECCCCCCCCCEECCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]