Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905471

Identifier: 220905471

GI number: 220905471

Start: 2664775

End: 2665461

Strand: Reverse

Name: 220905471

Synonym: Ddes_2209

Alternate gene names: NA

Gene position: 2665461-2664775 (Counterclockwise)

Preceding gene: 220905472

Following gene: 220905467

Centisome position: 92.76

GC content: 61.72

Gene sequence:

>687_bases
ATGACCAGCAAAGGCAAGGTTGTCGCCATAGTACAGGCCCGGCTGGGTTCAAGCCGCCTGCCGCTGAAATCCCTGCTCTG
CCTGCGTGATCTGCCGGTTATCGATTGGGTGGCGCGCCGCCTTGCCGCGGCAAGCCGTCTGGATGGCATCATGGTGGCCG
TGCCCGATACTCCGCTGGATGTGGTGCTGCTGGAGCACCTGCGCCGCCGGGGCATACCCTGCATGGCCGGGCCGGAAGAC
GATGTGCTGGCGCGTTTTTGCCAGGCGGCGAAACTGGCAGATGCCGGGCTTGTGGTGCGCGTATGTGCAGACAACCCCCT
TATCTGGGGCGGTGCCGTGGACAGGCTGGTGGATTTTTACTGCGCGGGCCGGTGGGATTACGCCTATAACCACATTCCAC
GCAACAATCTCTGGCCGGACGGGCTTGGGGCAGAGGTGCTTTCGCGCGAGCTGCTTGAGAGCCTGGACCAGAAGGCCGTG
GAGCCTTCGCAGCGCGAGCACTGCCTCAACTATATATGGGACAATGCCAAAAAATTCCGCATCGGTACATTTGACCCCGA
TGAGGAATGGCTGTGCCGCCCGGATCTGCGGCTGGATATGGACAGGCCCGACGATTTCCGCCGTCTGGCACTGCGCCCCA
TCAGCCCTGATATGGACGCGAGAGCCATTGTGGATATTTTTGGCTAG

Upstream 100 bases:

>100_bases
CTTCGGGCAGACAATATTGTCTCAAGGGTACGCTGTTCCAGATGCAGGGCGCCATGCCGTTCAGGAATACCCACTATCGC
CGGACACGGCGGAGGAAAAT

Downstream 100 bases:

>100_bases
AGCAATTAACGCTTCAAATGATTGTTTAACGATCGGCGAAGCCGCCCTATAATCATTTGGCGACAAGAAATTGGAGACAA
ATCCTTGTAGGGCATTTCAA

Product: acylneuraminate cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLDVVLLEHLRRRGIPCMAGPED
DVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFYCAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAV
EPSQREHCLNYIWDNAKKFRIGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG

Sequences:

>Translated_228_residues
MTSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLDVVLLEHLRRRGIPCMAGPED
DVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFYCAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAV
EPSQREHCLNYIWDNAKKFRIGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG
>Mature_227_residues
TSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLDVVLLEHLRRRGIPCMAGPEDD
VLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFYCAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAVE
PSQREHCLNYIWDNAKKFRIGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG

Specific function: Unknown

COG id: COG1861

COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: NA

Molecular weight: Translated: 25687; Mature: 25556

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLD
CCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH
VVLLEHLRRRGIPCMAGPEDDVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFY
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECHHHHHHHHHH
CAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAVEPSQREHCLNYIWDNAKKFR
HCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEE
IGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG
ECCCCCCCCCEECCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHEECC
>Mature Secondary Structure 
TSKGKVVAIVQARLGSSRLPLKSLLCLRDLPVIDWVARRLAAASRLDGIMVAVPDTPLD
CCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH
VVLLEHLRRRGIPCMAGPEDDVLARFCQAAKLADAGLVVRVCADNPLIWGGAVDRLVDFY
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECHHHHHHHHHH
CAGRWDYAYNHIPRNNLWPDGLGAEVLSRELLESLDQKAVEPSQREHCLNYIWDNAKKFR
HCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEE
IGTFDPDEEWLCRPDLRLDMDRPDDFRRLALRPISPDMDARAIVDIFG
ECCCCCCCCCEECCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]