Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905399
Identifier: 220905399
GI number: 220905399
Start: 2574519
End: 2575304
Strand: Reverse
Name: 220905399
Synonym: Ddes_2137
Alternate gene names: NA
Gene position: 2575304-2574519 (Counterclockwise)
Preceding gene: 220905400
Following gene: 220905398
Centisome position: 89.62
GC content: 65.01
Gene sequence:
>786_bases ATGATTTCACAAGATATGTCCTCACCCCTTGAAGCTCCTGTCTGCCGTCGTTGCGGCATGTGCTGTCTGCGTGGCGGCCC CACCCTCATGCAGGCGGATCTGCCGCGCCTCACAGGAGGTGTACTTACCCTTGAGACGCTTATATGCCTGCGCGCGGGGG AGTGGGCGCGTGACGATGCGCGGGGCGAGCTGCGCCCGCTTGACCGGGAGTGCATCAAGGTGGCAGGGCTTGGCGGCCAG GCACACCCCTGGCGTTGCCGTTTTTACCGCGACGCTTCGGGCTGCGCCATTTACGCCCACCGCCCGGTGCAGTGCTCGGC TCTGTTCTGCATGAATACGGACCCGCTGGAAGACCTGCTGGCCCGCGAGCCTCTGCTTGACCGCGCAAAGGCTCTGGAGG CGCTGGCCTCTCTGGCGCATATACCAGGTTTTTACGGAATGCCCGATGGGACCCGCGCCCTTCTGCCCGACCTTGTGACC GCCCACGAAGAGCAGAATCCCGTGGCTCCCGTACTTGAGGCTGCGGTGCGTCTTGGCTTCGCGCCCAAGGGGGCGAGCGG CGTAACCGGGGAAGAGACCACGATGGAAGAGAGCGAACGCCAAAACCTGCTGGACGGTATCAGCAAGGCCGTGCGCACAG AGGCGGCTTTTCGCGATCTGTGTGTGGAGCGCGCAGGCATACCCGCCGCCATGCTGCCTTTTCTTTTGGGGCGGCCCATG GCCGATCTGCTGGCCGAGGTCGGGCTGCGCCCGGCGGCTACTACCCCGGAGCGGTCTCTGCTGTAA
Upstream 100 bases:
>100_bases TCCAAGCGCGCGGCGTCCGGTAAAAACAGCATCCGCCCGCGCCTTGCGCATTGTGTACCGGCGGCATGAAAGCCCGGCGG CATGCCGCAATGGAGACCGC
Downstream 100 bases:
>100_bases GGTGCATGCGGCGGCAGCGTCGCGCGAGTTTCACCGTAGCAGCCAGCCCGGTGTATACCCGCTTTCTGTGCGGCGGATCA TGCGATTACTGCGCGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MISQDMSSPLEAPVCRRCGMCCLRGGPTLMQADLPRLTGGVLTLETLICLRAGEWARDDARGELRPLDRECIKVAGLGGQ AHPWRCRFYRDASGCAIYAHRPVQCSALFCMNTDPLEDLLAREPLLDRAKALEALASLAHIPGFYGMPDGTRALLPDLVT AHEEQNPVAPVLEAAVRLGFAPKGASGVTGEETTMEESERQNLLDGISKAVRTEAAFRDLCVERAGIPAAMLPFLLGRPM ADLLAEVGLRPAATTPERSLL
Sequences:
>Translated_261_residues MISQDMSSPLEAPVCRRCGMCCLRGGPTLMQADLPRLTGGVLTLETLICLRAGEWARDDARGELRPLDRECIKVAGLGGQ AHPWRCRFYRDASGCAIYAHRPVQCSALFCMNTDPLEDLLAREPLLDRAKALEALASLAHIPGFYGMPDGTRALLPDLVT AHEEQNPVAPVLEAAVRLGFAPKGASGVTGEETTMEESERQNLLDGISKAVRTEAAFRDLCVERAGIPAAMLPFLLGRPM ADLLAEVGLRPAATTPERSLL >Mature_261_residues MISQDMSSPLEAPVCRRCGMCCLRGGPTLMQADLPRLTGGVLTLETLICLRAGEWARDDARGELRPLDRECIKVAGLGGQ AHPWRCRFYRDASGCAIYAHRPVQCSALFCMNTDPLEDLLAREPLLDRAKALEALASLAHIPGFYGMPDGTRALLPDLVT AHEEQNPVAPVLEAAVRLGFAPKGASGVTGEETTMEESERQNLLDGISKAVRTEAAFRDLCVERAGIPAAMLPFLLGRPM ADLLAEVGLRPAATTPERSLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28161; Mature: 28161
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQDMSSPLEAPVCRRCGMCCLRGGPTLMQADLPRLTGGVLTLETLICLRAGEWARDDA CCCCCCCCCCCCHHHHHHCHHHHCCCCCHHHHCCHHHHCHHHHHHHHHHHHCCCCCCCCC RGELRPLDRECIKVAGLGGQAHPWRCRFYRDASGCAIYAHRPVQCSALFCMNTDPLEDLL CCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHH AREPLLDRAKALEALASLAHIPGFYGMPDGTRALLPDLVTAHEEQNPVAPVLEAAVRLGF HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC APKGASGVTGEETTMEESERQNLLDGISKAVRTEAAFRDLCVERAGIPAAMLPFLLGRPM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCH ADLLAEVGLRPAATTPERSLL HHHHHHHCCCCCCCCCHHCCC >Mature Secondary Structure MISQDMSSPLEAPVCRRCGMCCLRGGPTLMQADLPRLTGGVLTLETLICLRAGEWARDDA CCCCCCCCCCCCHHHHHHCHHHHCCCCCHHHHCCHHHHCHHHHHHHHHHHHCCCCCCCCC RGELRPLDRECIKVAGLGGQAHPWRCRFYRDASGCAIYAHRPVQCSALFCMNTDPLEDLL CCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHH AREPLLDRAKALEALASLAHIPGFYGMPDGTRALLPDLVTAHEEQNPVAPVLEAAVRLGF HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC APKGASGVTGEETTMEESERQNLLDGISKAVRTEAAFRDLCVERAGIPAAMLPFLLGRPM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCH ADLLAEVGLRPAATTPERSLL HHHHHHHCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA