Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905350
Identifier: 220905350
GI number: 220905350
Start: 2515972
End: 2516409
Strand: Reverse
Name: 220905350
Synonym: Ddes_2088
Alternate gene names: NA
Gene position: 2516409-2515972 (Counterclockwise)
Preceding gene: 220905354
Following gene: 220905341
Centisome position: 87.57
GC content: 61.19
Gene sequence:
>438_bases ATGCGTTTTGATATTCTCGGCAAAGCCGTGCGCGTCCTGATGCCCGCGCTGTGCGCGGCCCTGCTGTTGCCCGCCTGCTC CACCAAGGAGCCGGAAGCCGCACCCAGCGGCATGACCCTTACGGTAAACCTGCGCGACGTTCACCGCTGCTCGCGTATTT CGCCTGAAATAACGGTGCTCCAGGCTCCCAACGGTACGGATTATTTTGATGTGCGCCTGGTGGAATACACCGGCGACGCC CAGGAGCTTTTCCTTGGCGGCGGCCTGTGGGATAATGACAGTTCGGGCGTTATACCTGAAGGTGGCCTGACGCGCCACTA TCGCGGTCCCTGCCCGCCTGTCGGACAGGCCAGGGACTATGCCTTTGTGGTTGCAGCCATGAACAGAAGCAGCATGCAGC CGCTGGCCGTTCGCCTGCACCGCTTTACGCAGGAATAA
Upstream 100 bases:
>100_bases AGAATAGACATAAAACGACTCCCAGTGGTTGTTGTATTCGCCATGACTATTGGTTATGCTTCCAAAAGCCGCATAAAGCA ATTGTCATTTGGAGGCTCTG
Downstream 100 bases:
>100_bases ACGCCGCGGTCTGCCCGCCCTGCATTGTGAAAGCCAAGAAAAACCGCCGCCGGGTCACCCGGCGGCGGTTTTTGTGTATC TGTTTTTCAGGGTATTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MRFDILGKAVRVLMPALCAALLLPACSTKEPEAAPSGMTLTVNLRDVHRCSRISPEITVLQAPNGTDYFDVRLVEYTGDA QELFLGGGLWDNDSSGVIPEGGLTRHYRGPCPPVGQARDYAFVVAAMNRSSMQPLAVRLHRFTQE
Sequences:
>Translated_145_residues MRFDILGKAVRVLMPALCAALLLPACSTKEPEAAPSGMTLTVNLRDVHRCSRISPEITVLQAPNGTDYFDVRLVEYTGDA QELFLGGGLWDNDSSGVIPEGGLTRHYRGPCPPVGQARDYAFVVAAMNRSSMQPLAVRLHRFTQE >Mature_145_residues MRFDILGKAVRVLMPALCAALLLPACSTKEPEAAPSGMTLTVNLRDVHRCSRISPEITVLQAPNGTDYFDVRLVEYTGDA QELFLGGGLWDNDSSGVIPEGGLTRHYRGPCPPVGQARDYAFVVAAMNRSSMQPLAVRLHRFTQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15831; Mature: 15831
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDILGKAVRVLMPALCAALLLPACSTKEPEAAPSGMTLTVNLRDVHRCSRISPEITVL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEE QAPNGTDYFDVRLVEYTGDAQELFLGGGLWDNDSSGVIPEGGLTRHYRGPCPPVGQARDY ECCCCCCEEEEEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE AFVVAAMNRSSMQPLAVRLHRFTQE EEEEEECCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRFDILGKAVRVLMPALCAALLLPACSTKEPEAAPSGMTLTVNLRDVHRCSRISPEITVL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEE QAPNGTDYFDVRLVEYTGDAQELFLGGGLWDNDSSGVIPEGGLTRHYRGPCPPVGQARDY ECCCCCCEEEEEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE AFVVAAMNRSSMQPLAVRLHRFTQE EEEEEECCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA