Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is fusA [H]
Identifier: 220905331
GI number: 220905331
Start: 2489647
End: 2491725
Strand: Reverse
Name: fusA [H]
Synonym: Ddes_2069
Alternate gene names: 220905331
Gene position: 2491725-2489647 (Counterclockwise)
Preceding gene: 220905332
Following gene: 220905330
Centisome position: 86.72
GC content: 59.64
Gene sequence:
>2079_bases GTGTCCCGCACCGTTCCTGTAGACAAACAGCGCAATATCGGCATCATGGCCCATATTGACGCCGGCAAAACCACCACCAC CGAGCGCATTCTTTTCTATACCGGCGTGAGCCACAAGATTGGCGAAACGCACGAAGGCCAGGCCACCATGGACTGGATGG AGCAGGAACAGGAGCGTGGCATCACCATTACCTCCGCTGCCACCACCTGCTTCTGGAAAGACTGCCGCATCAACATCATC GACACCCCGGGCCACGTTGACTTCACTATTGAAGTGGAACGTTCGCTGCGTGTGCTTGACGGCGCCATCTGCGTGTTTGA CGCCGTGGCCGGTGTTGAACCCCAGTCTGAAACCGTGTGGCGCCAGGCCGACCACTACGGTGTGCCCCGCATCTGCTTTG TGAACAAGATGGACCGCATCGGCGCCAACTTCTTCCGCTGCGTGGGCATGATCCATGACCGCCTGGGCGCCAAGGCGGTG CCGCTGGAACTGCCCATCGGCGCTGAAGACAAGTTTGAAGGCGTCGTGGACCTCGTGCGCGGCAAGGCCATCCGCTTTGA CAAGCTCAGCAAGGGTCAGGAATTTCTGGTTGAAGACGTGCCCGCCGACATGAAAGACCTCTTTGAGGAAAAGCGGCACG AACTGCTTGAAGCCGTGGCGGAAGAAGATGAAGTACTGCTCGAAAAGTACCTGAGCGGCGAAACCCTTACGGAAGAGGAA ATAGTTTCCTGCATCCGCAAGGCCACCATTGCCCGCTCCATCGTTCCTGTCATGTGCGGCTCGGCTTTCCGCAACATGGG TGTGCAGCCCCTGCTGGACGCCGTGGTGGACTATCTGCCTTCACCTGTGGACATTCCGCCCATGCCCGGTCATGTGCCCG GCAAGGAAGATGAAATCATCGAATGCCACTGCACCGACAAGGAACCCCTGGCCGGCCTGCTGTTCAAGCTGTTCTCCGAC CCCTTCATCGGGCATCTTTCGTTCTTCCGCATTTACTCGGGCTTCCTTGAGTCCGGCAGCACGGTGTACAACTCCAACAC CGGCAAGCGCGAGCGCATCGGCCGCATCCTCAAGATGCACGCCAATAAGCGTGAAGACGTGAAATGGGCCGGCGCGGGCG ACATTGTGGCTCTTGTGGGCCTCAAGAACGCCGCCACCGGCGACACCCTGTGCGATGAAAAGCGCCCGGTCATTCTGGAG TCACTGAATATTCCCGAGCCGGTCATTGAAGTGGCCATTGAGCCCAAGACCAAGGCTGACCGCGACGCCCTTTCCGCCGC GCTCAACAAGCTCGCCAAGGAAGACCCCTCTTTCCGCGTCAAGGGCGACGAAGAAACCAACCAGACCCTCATCGCCGGCA TGGGCGAACTGCATCTGGAAATCATCGTTGACCGCCTGACCCGTGAATTCAACGTGAACGCCAACGTGGGCAAGCCTCAG GTGGCCTATCGCGAAACCATTTCCAAGCCCGCCAAGTCCGACCTCAAGCACGCCAAGCAGTCCGGCGGGCGCGGCCAGTA CGGCCACGTTGTTATCGAGATCGAGCCAAACCCGGGCAATGGCTATGAGTTCATCAACTCCATCACCGGCGGCGTCATTC CCAAGGAATACATCACCCCGGTGGACAAGGGTATCAACGATGCCCTGAAGTCCGGTGTTCTGGCCGGTTTCCCCGTGGTG GACGTGAAGGTCAATCTGGTCTTCGGTTCCTACCACGAAGTGGACTCGTCGGAACAGGCCTTCTACGTGGCAGGCTCCAT GGCCATCAAGGACGCCATGCACAAGGCCAGCCCCGTGCTGCTTGAACCCATAATGGACGTGGAAGTGGTGACGCCCGAGG AATACCTCGGCGACGTCATGGGTGACCTCAACGGCCGCCGCGGCCGTGTGCAGAGCATGGAAGCCCGCGCCGGCGGTGCG CAGAGCGTGCGCGCTCAGGTGCCGCTGTCCGCCATGTTCGGCTACGCCACTGACCTGCGCTCGCGCACTCAGGGCCGCGC CACCTTCACCATGCAGTTTGACCATTACGAAAAAGTGCCCCAGGCCATTTCTGAAGAAATTCAGAAAAGCAGGACATAG
Upstream 100 bases:
>100_bases CCCGATTTTCTCATGAATGTATCCCGACGCCGCATCCGTAAGGAAGCGGCGTCGGTTTTGCACCACACCACACCGCATCC GCAGTATGGAGGATAACCCC
Downstream 100 bases:
>100_bases GCATTATGCGGGCGGGCGTTCCTCGGAGCGCCCGCCCTTGTCCTTCGCGTCACGGGCAGGCTGCTGCCGCCCATTGGCAG CGAAGGCCGGGGAAGGATAT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSRTVPVDKQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGETHEGQATMDWMEQEQERGITITSAATTCFWKDCRINII DTPGHVDFTIEVERSLRVLDGAICVFDAVAGVEPQSETVWRQADHYGVPRICFVNKMDRIGANFFRCVGMIHDRLGAKAV PLELPIGAEDKFEGVVDLVRGKAIRFDKLSKGQEFLVEDVPADMKDLFEEKRHELLEAVAEEDEVLLEKYLSGETLTEEE IVSCIRKATIARSIVPVMCGSAFRNMGVQPLLDAVVDYLPSPVDIPPMPGHVPGKEDEIIECHCTDKEPLAGLLFKLFSD PFIGHLSFFRIYSGFLESGSTVYNSNTGKRERIGRILKMHANKREDVKWAGAGDIVALVGLKNAATGDTLCDEKRPVILE SLNIPEPVIEVAIEPKTKADRDALSAALNKLAKEDPSFRVKGDEETNQTLIAGMGELHLEIIVDRLTREFNVNANVGKPQ VAYRETISKPAKSDLKHAKQSGGRGQYGHVVIEIEPNPGNGYEFINSITGGVIPKEYITPVDKGINDALKSGVLAGFPVV DVKVNLVFGSYHEVDSSEQAFYVAGSMAIKDAMHKASPVLLEPIMDVEVVTPEEYLGDVMGDLNGRRGRVQSMEARAGGA QSVRAQVPLSAMFGYATDLRSRTQGRATFTMQFDHYEKVPQAISEEIQKSRT
Sequences:
>Translated_692_residues MSRTVPVDKQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGETHEGQATMDWMEQEQERGITITSAATTCFWKDCRINII DTPGHVDFTIEVERSLRVLDGAICVFDAVAGVEPQSETVWRQADHYGVPRICFVNKMDRIGANFFRCVGMIHDRLGAKAV PLELPIGAEDKFEGVVDLVRGKAIRFDKLSKGQEFLVEDVPADMKDLFEEKRHELLEAVAEEDEVLLEKYLSGETLTEEE IVSCIRKATIARSIVPVMCGSAFRNMGVQPLLDAVVDYLPSPVDIPPMPGHVPGKEDEIIECHCTDKEPLAGLLFKLFSD PFIGHLSFFRIYSGFLESGSTVYNSNTGKRERIGRILKMHANKREDVKWAGAGDIVALVGLKNAATGDTLCDEKRPVILE SLNIPEPVIEVAIEPKTKADRDALSAALNKLAKEDPSFRVKGDEETNQTLIAGMGELHLEIIVDRLTREFNVNANVGKPQ VAYRETISKPAKSDLKHAKQSGGRGQYGHVVIEIEPNPGNGYEFINSITGGVIPKEYITPVDKGINDALKSGVLAGFPVV DVKVNLVFGSYHEVDSSEQAFYVAGSMAIKDAMHKASPVLLEPIMDVEVVTPEEYLGDVMGDLNGRRGRVQSMEARAGGA QSVRAQVPLSAMFGYATDLRSRTQGRATFTMQFDHYEKVPQAISEEIQKSRT >Mature_691_residues SRTVPVDKQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGETHEGQATMDWMEQEQERGITITSAATTCFWKDCRINIID TPGHVDFTIEVERSLRVLDGAICVFDAVAGVEPQSETVWRQADHYGVPRICFVNKMDRIGANFFRCVGMIHDRLGAKAVP LELPIGAEDKFEGVVDLVRGKAIRFDKLSKGQEFLVEDVPADMKDLFEEKRHELLEAVAEEDEVLLEKYLSGETLTEEEI VSCIRKATIARSIVPVMCGSAFRNMGVQPLLDAVVDYLPSPVDIPPMPGHVPGKEDEIIECHCTDKEPLAGLLFKLFSDP FIGHLSFFRIYSGFLESGSTVYNSNTGKRERIGRILKMHANKREDVKWAGAGDIVALVGLKNAATGDTLCDEKRPVILES LNIPEPVIEVAIEPKTKADRDALSAALNKLAKEDPSFRVKGDEETNQTLIAGMGELHLEIIVDRLTREFNVNANVGKPQV AYRETISKPAKSDLKHAKQSGGRGQYGHVVIEIEPNPGNGYEFINSITGGVIPKEYITPVDKGINDALKSGVLAGFPVVD VKVNLVFGSYHEVDSSEQAFYVAGSMAIKDAMHKASPVLLEPIMDVEVVTPEEYLGDVMGDLNGRRGRVQSMEARAGGAQ SVRAQVPLSAMFGYATDLRSRTQGRATFTMQFDHYEKVPQAISEEIQKSRT
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=43.5277382645804, Blast_Score=559, Evalue=1e-159, Organism=Homo sapiens, GI19923640, Length=717, Percent_Identity=40.1673640167364, Blast_Score=477, Evalue=1e-134, Organism=Homo sapiens, GI25306283, Length=461, Percent_Identity=42.9501084598698, Blast_Score=332, Evalue=9e-91, Organism=Homo sapiens, GI25306287, Length=287, Percent_Identity=52.2648083623693, Blast_Score=281, Evalue=2e-75, Organism=Homo sapiens, GI4503483, Length=483, Percent_Identity=28.1573498964803, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI94966754, Length=135, Percent_Identity=41.4814814814815, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI157426893, Length=147, Percent_Identity=38.0952380952381, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI310132016, Length=117, Percent_Identity=41.8803418803419, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI310110807, Length=117, Percent_Identity=41.8803418803419, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI310123363, Length=117, Percent_Identity=41.8803418803419, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI94966752, Length=64, Percent_Identity=50, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1789738, Length=703, Percent_Identity=62.1621621621622, Blast_Score=882, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=489, Percent_Identity=28.6298568507157, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=40.5714285714286, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788922, Length=177, Percent_Identity=36.1581920903955, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17533571, Length=700, Percent_Identity=41.1428571428571, Blast_Score=521, Evalue=1e-148, Organism=Caenorhabditis elegans, GI17556745, Length=698, Percent_Identity=29.512893982808, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17506493, Length=480, Percent_Identity=28.125, Blast_Score=107, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17557151, Length=138, Percent_Identity=39.1304347826087, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71988819, Length=138, Percent_Identity=36.231884057971, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71988811, Length=138, Percent_Identity=36.231884057971, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17552882, Length=135, Percent_Identity=32.5925925925926, Blast_Score=69, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323098, Length=694, Percent_Identity=43.6599423631124, Blast_Score=566, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6322359, Length=781, Percent_Identity=34.0588988476312, Blast_Score=417, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6324707, Length=807, Percent_Identity=26.1462205700124, Blast_Score=171, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6320593, Length=807, Percent_Identity=26.1462205700124, Blast_Score=171, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6323320, Length=140, Percent_Identity=37.8571428571429, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=35.8620689655172, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324761, Length=130, Percent_Identity=35.3846153846154, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24582462, Length=697, Percent_Identity=44.6197991391679, Blast_Score=586, Evalue=1e-167, Organism=Drosophila melanogaster, GI221458488, Length=719, Percent_Identity=33.7969401947149, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI24585709, Length=492, Percent_Identity=28.0487804878049, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24585711, Length=495, Percent_Identity=27.6767676767677, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24585713, Length=495, Percent_Identity=27.6767676767677, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI78706572, Length=143, Percent_Identity=37.0629370629371, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI28574573, Length=238, Percent_Identity=30.672268907563, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357743, Length=135, Percent_Identity=31.1111111111111, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76333; Mature: 76202
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTVPVDKQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGETHEGQATMDWMEQEQERG CCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWKDCRINIIDTPGHVDFTIEVERSLRVLDGAICVFDAVAGVEPQSETVW EEEEECCCEEEEECCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHH RQADHYGVPRICFVNKMDRIGANFFRCVGMIHDRLGAKAVPLELPIGAEDKFEGVVDLVR HHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHC GKAIRFDKLSKGQEFLVEDVPADMKDLFEEKRHELLEAVAEEDEVLLEKYLSGETLTEEE CCCEEEHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IVSCIRKATIARSIVPVMCGSAFRNMGVQPLLDAVVDYLPSPVDIPPMPGHVPGKEDEII HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE ECHCTDKEPLAGLLFKLFSDPFIGHLSFFRIYSGFLESGSTVYNSNTGKRERIGRILKMH EEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH ANKREDVKWAGAGDIVALVGLKNAATGDTLCDEKRPVILESLNIPEPVIEVAIEPKTKAD CCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHEEECCCCCCH RDALSAALNKLAKEDPSFRVKGDEETNQTLIAGMGELHLEIIVDRLTREFNVNANVGKPQ HHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCH VAYRETISKPAKSDLKHAKQSGGRGQYGHVVIEIEPNPGNGYEFINSITGGVIPKEYITP HHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHCH VDKGINDALKSGVLAGFPVVDVKVNLVFGSYHEVDSSEQAFYVAGSMAIKDAMHKASPVL HHCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHCCCHH LEPIMDVEVVTPEEYLGDVMGDLNGRRGRVQSMEARAGGAQSVRAQVPLSAMFGYATDLR CCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHH SRTQGRATFTMQFDHYEKVPQAISEEIQKSRT HCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRTVPVDKQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGETHEGQATMDWMEQEQERG CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWKDCRINIIDTPGHVDFTIEVERSLRVLDGAICVFDAVAGVEPQSETVW EEEEECCCEEEEECCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHH RQADHYGVPRICFVNKMDRIGANFFRCVGMIHDRLGAKAVPLELPIGAEDKFEGVVDLVR HHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHC GKAIRFDKLSKGQEFLVEDVPADMKDLFEEKRHELLEAVAEEDEVLLEKYLSGETLTEEE CCCEEEHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IVSCIRKATIARSIVPVMCGSAFRNMGVQPLLDAVVDYLPSPVDIPPMPGHVPGKEDEII HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE ECHCTDKEPLAGLLFKLFSDPFIGHLSFFRIYSGFLESGSTVYNSNTGKRERIGRILKMH EEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH ANKREDVKWAGAGDIVALVGLKNAATGDTLCDEKRPVILESLNIPEPVIEVAIEPKTKAD CCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHEEECCCCCCH RDALSAALNKLAKEDPSFRVKGDEETNQTLIAGMGELHLEIIVDRLTREFNVNANVGKPQ HHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCH VAYRETISKPAKSDLKHAKQSGGRGQYGHVVIEIEPNPGNGYEFINSITGGVIPKEYITP HHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHCH VDKGINDALKSGVLAGFPVVDVKVNLVFGSYHEVDSSEQAFYVAGSMAIKDAMHKASPVL HHCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHCCCHH LEPIMDVEVVTPEEYLGDVMGDLNGRRGRVQSMEARAGGAQSVRAQVPLSAMFGYATDLR CCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHH SRTQGRATFTMQFDHYEKVPQAISEEIQKSRT HCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA