Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905319
Identifier: 220905319
GI number: 220905319
Start: 2473475
End: 2474500
Strand: Reverse
Name: 220905319
Synonym: Ddes_2057
Alternate gene names: NA
Gene position: 2474500-2473475 (Counterclockwise)
Preceding gene: 220905320
Following gene: 220905318
Centisome position: 86.12
GC content: 65.5
Gene sequence:
>1026_bases ATGAGCCGTCCGGATCTTTATCTTGCCGTCAGCCTTGATGTGGAAGAAGAAGGGCTGTTCGGCGGGCAGTACGCCCGCCG GGGCTGTTCCACTGCCAATACGGCCAGTCTGACGCGCCTTGCCCCCTTGTGCGAACGGGGGGTGCGGCCCACACTGTTCT GTGCGCACAGTGTGCTGGCCGATGCGGCTTCCCGCAGCGCTCTGGCTCATGCCCGCGACAGGTACGGGGCGGAAATCGGC GCGCATCTGCACCACTGGAACACGCCGCCTCTGACCCTTGACGGACCCGAGGCCGACGCCGCCCTTGCCGACAATGCCGC CAGTGTACCCGCGGCCGCAGTTCCCGGCCCTCTCATGGCTGCCAAGCTTGCAAGCCTCATGGCCGCCGGCCGGGATTTTC AGGGCGCAGCGCTGACATCGTTTCGTATGGGGCGCTGGGACCTGCACCGCGCCCTCTGGCCGTTGCTGGCCGAAGCCGGT ATCCTGGTGGATGCCTCGGTGCGTCCGCTGCATTGCGGGGCCACACCGCAGGCCGGGCCGGACCATTTTAGCGCACCGCG CGATCCGTACTGGGTATCCATGCCGGAGGGCCGGATTTTTGAAGTTCCCCTCAGCGTAACCCCGCTTTTGCCGTGCCTGC CCCGCCTGCTGGGCCGCGCTGTGCCGCGCCTGCGCCCCGGATTCAAAAACTGGGGTGCCCTGAGTCTTTTGCCCGTCTAT CATCCCTTGTGGGCCATGCAGGCCATAACCAGGCTGTTTGTGGCACGGGGCGGCCGGGTGTTGTCCCTTACGTGGCACTC TTCAGAAATGATGCCGGGCGGCACGCCGCATCTGCCCGATGCCGCCGCTGTGGACAGGCTTATGGGCAAAATACTGGCCT GGACAGACTGGCTCATGGCCCGCTGGAACGTGCGTTGCCTGACGATGGCACAGCTGCGCGAAATCCTGGGGCCAGTTGCT CCGGACAGCAGCAGTCTGCACCGGGCCGCAGACGGCAGTCCAAATGACTGGGCCTGCTTTTCATAA
Upstream 100 bases:
>100_bases TGTATGTAGCGGAATGCGCCCGCGCCGCCCGGAAACGGGACAATGGTCACGATGCAGCCGGCCGGAGCTTTGCCGTAACC GGCATGGCGGAAGAGGGCGC
Downstream 100 bases:
>100_bases ACTGTTGCGGGCAGGAAAATGTTCACGCACAGTTGCCACACAACGGAACAGCGCTGCCATGCTGTGCGTTTCAATGGCGT ATTCCATTTTTCAGGTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSRPDLYLAVSLDVEEEGLFGGQYARRGCSTANTASLTRLAPLCERGVRPTLFCAHSVLADAASRSALAHARDRYGAEIG AHLHHWNTPPLTLDGPEADAALADNAASVPAAAVPGPLMAAKLASLMAAGRDFQGAALTSFRMGRWDLHRALWPLLAEAG ILVDASVRPLHCGATPQAGPDHFSAPRDPYWVSMPEGRIFEVPLSVTPLLPCLPRLLGRAVPRLRPGFKNWGALSLLPVY HPLWAMQAITRLFVARGGRVLSLTWHSSEMMPGGTPHLPDAAAVDRLMGKILAWTDWLMARWNVRCLTMAQLREILGPVA PDSSSLHRAADGSPNDWACFS
Sequences:
>Translated_341_residues MSRPDLYLAVSLDVEEEGLFGGQYARRGCSTANTASLTRLAPLCERGVRPTLFCAHSVLADAASRSALAHARDRYGAEIG AHLHHWNTPPLTLDGPEADAALADNAASVPAAAVPGPLMAAKLASLMAAGRDFQGAALTSFRMGRWDLHRALWPLLAEAG ILVDASVRPLHCGATPQAGPDHFSAPRDPYWVSMPEGRIFEVPLSVTPLLPCLPRLLGRAVPRLRPGFKNWGALSLLPVY HPLWAMQAITRLFVARGGRVLSLTWHSSEMMPGGTPHLPDAAAVDRLMGKILAWTDWLMARWNVRCLTMAQLREILGPVA PDSSSLHRAADGSPNDWACFS >Mature_340_residues SRPDLYLAVSLDVEEEGLFGGQYARRGCSTANTASLTRLAPLCERGVRPTLFCAHSVLADAASRSALAHARDRYGAEIGA HLHHWNTPPLTLDGPEADAALADNAASVPAAAVPGPLMAAKLASLMAAGRDFQGAALTSFRMGRWDLHRALWPLLAEAGI LVDASVRPLHCGATPQAGPDHFSAPRDPYWVSMPEGRIFEVPLSVTPLLPCLPRLLGRAVPRLRPGFKNWGALSLLPVYH PLWAMQAITRLFVARGGRVLSLTWHSSEMMPGGTPHLPDAAAVDRLMGKILAWTDWLMARWNVRCLTMAQLREILGPVAP DSSSLHRAADGSPNDWACFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36773; Mature: 36642
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPDLYLAVSLDVEEEGLFGGQYARRGCSTANTASLTRLAPLCERGVRPTLFCAHSVLA CCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH DAASRSALAHARDRYGAEIGAHLHHWNTPPLTLDGPEADAALADNAASVPAAAVPGPLMA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCCCCCCCHHCCCHHHH AKLASLMAAGRDFQGAALTSFRMGRWDLHRALWPLLAEAGILVDASVRPLHCGATPQAGP HHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCC DHFSAPRDPYWVSMPEGRIFEVPLSVTPLLPCLPRLLGRAVPRLRPGFKNWGALSLLPVY CCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH HPLWAMQAITRLFVARGGRVLSLTWHSSEMMPGGTPHLPDAAAVDRLMGKILAWTDWLMA HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RWNVRCLTMAQLREILGPVAPDSSSLHRAADGSPNDWACFS HCCCCEEEHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRPDLYLAVSLDVEEEGLFGGQYARRGCSTANTASLTRLAPLCERGVRPTLFCAHSVLA CCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH DAASRSALAHARDRYGAEIGAHLHHWNTPPLTLDGPEADAALADNAASVPAAAVPGPLMA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCCCCCCCHHCCCHHHH AKLASLMAAGRDFQGAALTSFRMGRWDLHRALWPLLAEAGILVDASVRPLHCGATPQAGP HHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCC DHFSAPRDPYWVSMPEGRIFEVPLSVTPLLPCLPRLLGRAVPRLRPGFKNWGALSLLPVY CCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH HPLWAMQAITRLFVARGGRVLSLTWHSSEMMPGGTPHLPDAAAVDRLMGKILAWTDWLMA HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RWNVRCLTMAQLREILGPVAPDSSSLHRAADGSPNDWACFS HCCCCEEEHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA