Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905287
Identifier: 220905287
GI number: 220905287
Start: 2437008
End: 2437907
Strand: Reverse
Name: 220905287
Synonym: Ddes_2025
Alternate gene names: NA
Gene position: 2437907-2437008 (Counterclockwise)
Preceding gene: 220905290
Following gene: 220905286
Centisome position: 84.84
GC content: 58.33
Gene sequence:
>900_bases ATGCTTTTCTTCAACCGTTTCAGGCATGCTCTGGGCCACACGGCCGTCAAGAAGCCCTCTATAGGAGCTGTACTTGACGC GGCCTTTGCGCATCAGGTTTGTGTAGAAATTCTCTTTATCAATCGCAATCGTCAGATGGACAACGTGTACTGCCGCATAC GCAAAATGCGGCGGTCCAGTGTGCTGCTTGTGTGCAGTGTCAATTTTTTGCCCGATGCGCTTAATGGCGAGCAGTGCCTC ATCCATTTCAATCTGCCGCGCGCACTGCTTGTACATACCTTCAAGATGTCGGCCGTTGAAGCCCGTCAGGGATTTTTGTG TAAGACACACATTATCCATAACCATGTGGACCCGGAAAGCCGGCAGTGCGAAATCGAGATCAGCAGGCCCGAGGCCTATG TGCAGCGGGAGCTGCGCAAGCACGAGCGGATCTTTCCGTCGGCAGGTATGGTGCGTTCCGTAGACCTGTGGCTTCGGGGC AGGCTGCCCGCCCATTGGCGCGACCTGGGGGGCCCTGATTTTACTTTTCGCGAAGACAGCCCCGGGCAGCTTCGGCTGGT TAATATCTCCGCAGGCGGGGCGCGTCTTGAAATGGGCGATGTGGAAGAAGCAGACCGTTACCACAGGCTTTCCGGCACGC AGATGCTGCTTTGCGTTGTGCTCAACAGGCCGGGGCGCAAGCGTTGTGTGGCCCCGGTGGTCTGTCAGTGCGTGGAGGGG CTTTACAGCGCCACCATGCGGCGGCTTGCCCTGCGGTTGCGCTTTATACAGGTGTGGCTGACAGACAGTGACGGGCAGGG CGCGTGGGCCAGGGTGGGGGATGAAGGCGTACAGTCCATCAATGACTGGATCGCCAACGACTACAGCCTGCTGGCCGAAA AACCCGCGCACCTGCCCTGA
Upstream 100 bases:
>100_bases ATCGTATGCCGGAATAAATGAATCTATTATCGGTAGAGCTATCTGTTCTGTCTTGCGCTTCCAGACACGAAAAAGGGGGC AGCCCCGCAAGAGGCAGGAA
Downstream 100 bases:
>100_bases TGCCGTGGCGGACGCCGGCACCGCGGCAAAAGGGCGACATGCCCCGGGGTATGTTTTTGCAGCATGGCGCGTGGGCGCAT TGCTCCTTGACAGGGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLFFNRFRHALGHTAVKKPSIGAVLDAAFAHQVCVEILFINRNRQMDNVYCRIRKMRRSSVLLVCSVNFLPDALNGEQCL IHFNLPRALLVHTFKMSAVEARQGFLCKTHIIHNHVDPESRQCEIEISRPEAYVQRELRKHERIFPSAGMVRSVDLWLRG RLPAHWRDLGGPDFTFREDSPGQLRLVNISAGGARLEMGDVEEADRYHRLSGTQMLLCVVLNRPGRKRCVAPVVCQCVEG LYSATMRRLALRLRFIQVWLTDSDGQGAWARVGDEGVQSINDWIANDYSLLAEKPAHLP
Sequences:
>Translated_299_residues MLFFNRFRHALGHTAVKKPSIGAVLDAAFAHQVCVEILFINRNRQMDNVYCRIRKMRRSSVLLVCSVNFLPDALNGEQCL IHFNLPRALLVHTFKMSAVEARQGFLCKTHIIHNHVDPESRQCEIEISRPEAYVQRELRKHERIFPSAGMVRSVDLWLRG RLPAHWRDLGGPDFTFREDSPGQLRLVNISAGGARLEMGDVEEADRYHRLSGTQMLLCVVLNRPGRKRCVAPVVCQCVEG LYSATMRRLALRLRFIQVWLTDSDGQGAWARVGDEGVQSINDWIANDYSLLAEKPAHLP >Mature_299_residues MLFFNRFRHALGHTAVKKPSIGAVLDAAFAHQVCVEILFINRNRQMDNVYCRIRKMRRSSVLLVCSVNFLPDALNGEQCL IHFNLPRALLVHTFKMSAVEARQGFLCKTHIIHNHVDPESRQCEIEISRPEAYVQRELRKHERIFPSAGMVRSVDLWLRG RLPAHWRDLGGPDFTFREDSPGQLRLVNISAGGARLEMGDVEEADRYHRLSGTQMLLCVVLNRPGRKRCVAPVVCQCVEG LYSATMRRLALRLRFIQVWLTDSDGQGAWARVGDEGVQSINDWIANDYSLLAEKPAHLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34078; Mature: 34078
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFNRFRHALGHTAVKKPSIGAVLDAAFAHQVCVEILFINRNRQMDNVYCRIRKMRRSS CCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCC VLLVCSVNFLPDALNGEQCLIHFNLPRALLVHTFKMSAVEARQGFLCKTHIIHNHVDPES EEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCC RQCEIEISRPEAYVQRELRKHERIFPSAGMVRSVDLWLRGRLPAHWRDLGGPDFTFREDS CEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHCCCCCCEECCCC PGQLRLVNISAGGARLEMGDVEEADRYHRLSGTQMLLCVVLNRPGRKRCVAPVVCQCVEG CCEEEEEEEECCCCEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH LYSATMRRLALRLRFIQVWLTDSDGQGAWARVGDEGVQSINDWIANDYSLLAEKPAHLP HHHHHHHHHHHHHHEEEEEEECCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC >Mature Secondary Structure MLFFNRFRHALGHTAVKKPSIGAVLDAAFAHQVCVEILFINRNRQMDNVYCRIRKMRRSS CCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCC VLLVCSVNFLPDALNGEQCLIHFNLPRALLVHTFKMSAVEARQGFLCKTHIIHNHVDPES EEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCC RQCEIEISRPEAYVQRELRKHERIFPSAGMVRSVDLWLRGRLPAHWRDLGGPDFTFREDS CEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHCCCCCCEECCCC PGQLRLVNISAGGARLEMGDVEEADRYHRLSGTQMLLCVVLNRPGRKRCVAPVVCQCVEG CCEEEEEEEECCCCEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH LYSATMRRLALRLRFIQVWLTDSDGQGAWARVGDEGVQSINDWIANDYSLLAEKPAHLP HHHHHHHHHHHHHHEEEEEEECCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA