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The map label for this gene is dedA [H]

Identifier: 220905249

GI number: 220905249

Start: 2393318

End: 2393986

Strand: Reverse

Name: dedA [H]

Synonym: Ddes_1987

Alternate gene names: 220905249

Gene position: 2393986-2393318 (Counterclockwise)

Preceding gene: 220905253

Following gene: 220905244

Centisome position: 83.31

GC content: 52.77

Gene sequence:

>669_bases
ATGGATATGGTAAGTTATTTTATTGACTTTGTGCTGCACATTGATGTGCATCTTTTTGAACTGGTTGAACAGTATGGCCT
TTGGATTTACGCCATACTGTTTATTATTGTTTTTTGCGAAACAGGGCTTGTGGTCACTCCGTTTTTACCCGGTGATTCCC
TGCTGTTTGCTGCAGGCGTGGTGGCCGGAACGGGCCTTATGGGCTATGCTGAAGTGATGCTGGTGCTGCTGGCGGCGGGC
ATTCTGGGGGATGCCGTCAACTACTGCATTGGCCGCCATGTAGGCCCGGCCATCTTTTCGCGGGACAGTCGCTTCATCAA
GAAAGAACATCTGCTCAAGGCCCACCATTTTTACGAACGCCACGGCGGCAAGGCCATTGTGCTGGCGCGTTTTGTACCTA
TTGTGCGCACTTTTGCGCCTTTTGTGGCGGGCATCGCCCTCATGCATCCCCGTACGTTTTTTTTCTTTAACGTGACCGGG
TGCATCCTGTGGGTGGGCAGTCTCGTTTCCGCAGGGTTTTTTCTGGGCAACCTTGAGTGGGTGCGCCAGAATTTCAGCAT
TATCGTTTATGGTATTGTTATTGTATCCGTGCTGCCTGTGGTCATCGAAGTGCTGCGCTCCCGTCTGGGCAAGGGGAAAG
GCAGCTCCGGCGAAGGCGGCGGGGAATAG

Upstream 100 bases:

>100_bases
TTCTGTCGCATGCCTGTGTTGTGCCACAAGCGGGCTTGGGGTACAAGGGCGTTCGGGCGGGTTCATGCCGCCACGATACG
GGCCGGGAGCATATGAACGT

Downstream 100 bases:

>100_bases
GCATTTCGAGAGTTTTTTACGTGCCGTTTATACAGAAAATCCCGCCATAAGCGGGATTTTCTGTTTCTGGAACCGGCTGC
GGTTTTACATGACAACGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDMVSYFIDFVLHIDVHLFELVEQYGLWIYAILFIIVFCETGLVVTPFLPGDSLLFAAGVVAGTGLMGYAEVMLVLLAAG
ILGDAVNYCIGRHVGPAIFSRDSRFIKKEHLLKAHHFYERHGGKAIVLARFVPIVRTFAPFVAGIALMHPRTFFFFNVTG
CILWVGSLVSAGFFLGNLEWVRQNFSIIVYGIVIVSVLPVVIEVLRSRLGKGKGSSGEGGGE

Sequences:

>Translated_222_residues
MDMVSYFIDFVLHIDVHLFELVEQYGLWIYAILFIIVFCETGLVVTPFLPGDSLLFAAGVVAGTGLMGYAEVMLVLLAAG
ILGDAVNYCIGRHVGPAIFSRDSRFIKKEHLLKAHHFYERHGGKAIVLARFVPIVRTFAPFVAGIALMHPRTFFFFNVTG
CILWVGSLVSAGFFLGNLEWVRQNFSIIVYGIVIVSVLPVVIEVLRSRLGKGKGSSGEGGGE
>Mature_222_residues
MDMVSYFIDFVLHIDVHLFELVEQYGLWIYAILFIIVFCETGLVVTPFLPGDSLLFAAGVVAGTGLMGYAEVMLVLLAAG
ILGDAVNYCIGRHVGPAIFSRDSRFIKKEHLLKAHHFYERHGGKAIVLARFVPIVRTFAPFVAGIALMHPRTFFFFNVTG
CILWVGSLVSAGFFLGNLEWVRQNFSIIVYGIVIVSVLPVVIEVLRSRLGKGKGSSGEGGGE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=209, Percent_Identity=55.5023923444976, Blast_Score=234, Evalue=5e-63,
Organism=Escherichia coli, GI1789481, Length=156, Percent_Identity=38.4615384615385, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1789384, Length=191, Percent_Identity=31.9371727748691, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24370; Mature: 24370

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMVSYFIDFVLHIDVHLFELVEQYGLWIYAILFIIVFCETGLVVTPFLPGDSLLFAAGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
VAGTGLMGYAEVMLVLLAAGILGDAVNYCIGRHVGPAIFSRDSRFIKKEHLLKAHHFYER
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
HGGKAIVLARFVPIVRTFAPFVAGIALMHPRTFFFFNVTGCILWVGSLVSAGFFLGNLEW
CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQNFSIIVYGIVIVSVLPVVIEVLRSRLGKGKGSSGEGGGE
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDMVSYFIDFVLHIDVHLFELVEQYGLWIYAILFIIVFCETGLVVTPFLPGDSLLFAAGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
VAGTGLMGYAEVMLVLLAAGILGDAVNYCIGRHVGPAIFSRDSRFIKKEHLLKAHHFYER
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
HGGKAIVLARFVPIVRTFAPFVAGIALMHPRTFFFFNVTGCILWVGSLVSAGFFLGNLEW
CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQNFSIIVYGIVIVSVLPVVIEVLRSRLGKGKGSSGEGGGE
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]