| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904917
Identifier: 220904917
GI number: 220904917
Start: 1988384
End: 1988692
Strand: Reverse
Name: 220904917
Synonym: Ddes_1652
Alternate gene names: NA
Gene position: 1988692-1988384 (Counterclockwise)
Preceding gene: 220904918
Following gene: 220904907
Centisome position: 69.21
GC content: 52.75
Gene sequence:
>309_bases ATGGCCACACGATTTGGCACTACGCCGGAAATGATCATTCAAAGCATTGAGGAAAATGATACGACTTTTCTGCTGGCTAT TGACAGCACCGGTCTGTACATGACGACCCACAATTACGTGGGCAAACATCTTGCAGACCGTAACCGCTATAGCAACGCCG CCCGCCAGGATGTTGCCGCCCGTCTTGATGCTCTGGGACTGAATGCTGAAGAACTCTGGAAAAACAACCAGCATCTGATC CAGAGCGAAACGGCTTCTGCCAAAAAGGTGAACCCGCTCAAGGCGTCCAAGCGCGGCTCCAAGGGCTAG
Upstream 100 bases:
>100_bases TTGCAGCCGTTGTGATAGGGGGATATATTGACATTGAATTTCAATTTCATATAATACGGTTTCTGCCATAACGCCTTTTC CCGCATTGCAAGGAGAATCC
Downstream 100 bases:
>100_bases ATGTAGTGTTCCAATAGGTTTTCACCCTTTCCCTCATTCGGTTTGCTGTTGTCTGGTAACTCCAGCTTTACCGATTTTGG GAGGGTGAACAACCTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MATRFGTTPEMIIQSIEENDTTFLLAIDSTGLYMTTHNYVGKHLADRNRYSNAARQDVAARLDALGLNAEELWKNNQHLI QSETASAKKVNPLKASKRGSKG
Sequences:
>Translated_102_residues MATRFGTTPEMIIQSIEENDTTFLLAIDSTGLYMTTHNYVGKHLADRNRYSNAARQDVAARLDALGLNAEELWKNNQHLI QSETASAKKVNPLKASKRGSKG >Mature_101_residues ATRFGTTPEMIIQSIEENDTTFLLAIDSTGLYMTTHNYVGKHLADRNRYSNAARQDVAARLDALGLNAEELWKNNQHLIQ SETASAKKVNPLKASKRGSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11307; Mature: 11176
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRFGTTPEMIIQSIEENDTTFLLAIDSTGLYMTTHNYVGKHLADRNRYSNAARQDVAA CCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH RLDALGLNAEELWKNNQHLIQSETASAKKVNPLKASKRGSKG HHHHCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATRFGTTPEMIIQSIEENDTTFLLAIDSTGLYMTTHNYVGKHLADRNRYSNAARQDVAA CCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH RLDALGLNAEELWKNNQHLIQSETASAKKVNPLKASKRGSKG HHHHCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA