| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is phoH [H]
Identifier: 220904825
GI number: 220904825
Start: 1872639
End: 1873637
Strand: Reverse
Name: phoH [H]
Synonym: Ddes_1558
Alternate gene names: 220904825
Gene position: 1873637-1872639 (Counterclockwise)
Preceding gene: 220904831
Following gene: 220904824
Centisome position: 65.21
GC content: 58.46
Gene sequence:
>999_bases ATGGCAGTACATTCTTCCACGCTCGAAACCGTTGAGTTCGACGATCCCGCCCTGGCAAATCAGCTTTTTGGGCCGCATAA TGCGCATCTGGATTTGCTGGCTGTGGCCAGCGGTGCGCATGTGTCCAGCCGGGGGGCCAGCGTTATCATTGAAAGCCCTG ACGAGCATGTGCGACAGATTCTGTGCAACGTTTTTGTACAACTTTACGGACTGTTGGGCGGTGGCACCATCCTGAGCCAG CAGGACATTACGCGGGCGTACGAGATGCTTCGGGCTGATCCCGGGCTGAATCTGGCCCAGATTTTCCGCGATGCGGTTTT TGTAAACACCCCCCGCAAAACAGTGACTGCCCGCAATGTGTCACAGCGCACATATCTTGATCTCCTGCGGCGTCATGAGC TGGTATTTGCCGTAGGACCGGCAGGCACGGGCAAGACGTATCTGGCCGTGGCCATGGCCCTTTCCATGTTTCAGCAGCAC AAGGTCAAGCGCATCGTGCTCACGCGCCCGGCGGTGGAAGCCGGAGAGCGGCTGGGATTTTTGCCGGGCGATCTGGCGGA CAAGGTAAACCCGTACCTTCGCCCCCTGTATGATGCCCTTCATGATATGATGCCGCAGCCCAAGGTGGCCTCCATGCTGG AGGTCGGCTCCATCGAGGTGGCCCCCCTTGCTTTCATGCGCGGGCGTACCCTGAACGATGCGTTCATTATTCTGGATGAA GCCCAGAACACCACTCGGGAACAGATGAAGATGTTTCTCACCCGCATGGGCTTCGGTTCGCGCATGGTGGTCACGGGTGA CACCACCCAGATTGACCTGCCGGTTCAACCCGGCGGCCAGCGTCCACGATCGGGCCTTATCCATGCGCTGAACATTCTTC CCCATGTGCCGGGCCTTGCCGTACACCGCTTCAGCAAAGCGGACGTTGTGCGCCATCCCCTGGTGGGAGCCATAGTAAAC GCTTATGATAACGCAGAAAAAGACGGCCAGACCAGCTAG
Upstream 100 bases:
>100_bases TTCATCAGTATGTTATTGTGTTCGTATGCTGAAAAAAATACTCATGAAACAAACCGTTCCCAAGATGGACAGGCCACATA AAATAGGCTAGAGAGCGAAC
Downstream 100 bases:
>100_bases CTTCCTGGCGCTTGTTCAGGCGCTGAGGGCGCGGCATCATTGTGGATGGGGGCTTGCGGCCCTCATTCTTACTCTTCTGG CTCTTTCGCTTCTGGCGGGA
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MAVHSSTLETVEFDDPALANQLFGPHNAHLDLLAVASGAHVSSRGASVIIESPDEHVRQILCNVFVQLYGLLGGGTILSQ QDITRAYEMLRADPGLNLAQIFRDAVFVNTPRKTVTARNVSQRTYLDLLRRHELVFAVGPAGTGKTYLAVAMALSMFQQH KVKRIVLTRPAVEAGERLGFLPGDLADKVNPYLRPLYDALHDMMPQPKVASMLEVGSIEVAPLAFMRGRTLNDAFIILDE AQNTTREQMKMFLTRMGFGSRMVVTGDTTQIDLPVQPGGQRPRSGLIHALNILPHVPGLAVHRFSKADVVRHPLVGAIVN AYDNAEKDGQTS
Sequences:
>Translated_332_residues MAVHSSTLETVEFDDPALANQLFGPHNAHLDLLAVASGAHVSSRGASVIIESPDEHVRQILCNVFVQLYGLLGGGTILSQ QDITRAYEMLRADPGLNLAQIFRDAVFVNTPRKTVTARNVSQRTYLDLLRRHELVFAVGPAGTGKTYLAVAMALSMFQQH KVKRIVLTRPAVEAGERLGFLPGDLADKVNPYLRPLYDALHDMMPQPKVASMLEVGSIEVAPLAFMRGRTLNDAFIILDE AQNTTREQMKMFLTRMGFGSRMVVTGDTTQIDLPVQPGGQRPRSGLIHALNILPHVPGLAVHRFSKADVVRHPLVGAIVN AYDNAEKDGQTS >Mature_331_residues AVHSSTLETVEFDDPALANQLFGPHNAHLDLLAVASGAHVSSRGASVIIESPDEHVRQILCNVFVQLYGLLGGGTILSQQ DITRAYEMLRADPGLNLAQIFRDAVFVNTPRKTVTARNVSQRTYLDLLRRHELVFAVGPAGTGKTYLAVAMALSMFQQHK VKRIVLTRPAVEAGERLGFLPGDLADKVNPYLRPLYDALHDMMPQPKVASMLEVGSIEVAPLAFMRGRTLNDAFIILDEA QNTTREQMKMFLTRMGFGSRMVVTGDTTQIDLPVQPGGQRPRSGLIHALNILPHVPGLAVHRFSKADVVRHPLVGAIVNA YDNAEKDGQTS
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=226, Percent_Identity=57.5221238938053, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI1787257, Length=210, Percent_Identity=44.2857142857143, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36316; Mature: 36185
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHSSTLETVEFDDPALANQLFGPHNAHLDLLAVASGAHVSSRGASVIIESPDEHVRQI CCCCCCCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHHH LCNVFVQLYGLLGGGTILSQQDITRAYEMLRADPGLNLAQIFRDAVFVNTPRKTVTARNV HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCHHHHHCCC SQRTYLDLLRRHELVFAVGPAGTGKTYLAVAMALSMFQQHKVKRIVLTRPAVEAGERLGF HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCC LPGDLADKVNPYLRPLYDALHDMMPQPKVASMLEVGSIEVAPLAFMRGRTLNDAFIILDE CCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEHHHHHHCCCCCCCEEEEEEC AQNTTREQMKMFLTRMGFGSRMVVTGDTTQIDLPVQPGGQRPRSGLIHALNILPHVPGLA CCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHH VHRFSKADVVRHPLVGAIVNAYDNAEKDGQTS HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AVHSSTLETVEFDDPALANQLFGPHNAHLDLLAVASGAHVSSRGASVIIESPDEHVRQI CCCCCCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHHH LCNVFVQLYGLLGGGTILSQQDITRAYEMLRADPGLNLAQIFRDAVFVNTPRKTVTARNV HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCHHHHHCCC SQRTYLDLLRRHELVFAVGPAGTGKTYLAVAMALSMFQQHKVKRIVLTRPAVEAGERLGF HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCC LPGDLADKVNPYLRPLYDALHDMMPQPKVASMLEVGSIEVAPLAFMRGRTLNDAFIILDE CCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEHHHHHHCCCCCCCEEEEEEC AQNTTREQMKMFLTRMGFGSRMVVTGDTTQIDLPVQPGGQRPRSGLIHALNILPHVPGLA CCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHH VHRFSKADVVRHPLVGAIVNAYDNAEKDGQTS HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]