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The map label for this gene is glpB [H]

Identifier: 220904788

GI number: 220904788

Start: 1816153

End: 1817439

Strand: Reverse

Name: glpB [H]

Synonym: Ddes_1520

Alternate gene names: 220904788

Gene position: 1817439-1816153 (Counterclockwise)

Preceding gene: 220904789

Following gene: 220904787

Centisome position: 63.25

GC content: 61.62

Gene sequence:

>1287_bases
ATGAGCAGGATCGTTGACGTACTTGTGGCCGGTTCCGGCATGGCCGGGCTTGTGGCCGCCCTTACTGCCGCGAGCCAGGG
TAAAAAGGTCCGCATGCTTACCACGGGCATGGGATCTCTCGCCATAAGCGGCGGCAATGTTGATGTTCTGGCTTATGCTG
ACGGCAGGTATGTGTCCGACCCCTGGGCGGGGATGGCGCTTTTGCCTGCCGAACATCCGTACCGGCTTATGGGCGCGGAA
TGTGTACGCGAAGCCATAGCGTTTTTCCTGCGCCAGATGGAAGCCCGCCAGTGGCCCATGCAGGCCGCATCCACACCGTC
GGGGCAGGCCTGCAATGTGCAGATGCCCACTATTATGGGAACGCTCAAGCCGACCCACCTTTTGCCGGCAGGGGTGAACA
TCAAGGCCCTCAACGAGGCGCGGCGTATCCTCGTGGTCAGCGTGGAAGGACTGCGCGACTGCCGCCCGGCGCTTGTCATA
AGCCAGTTGCAGCGTTACAGGGCCTGGGCCGACAGGGAATTCGCCCAGTTGACCGTGTCTTCACCTCTGGGCGAAACGCA
TCGTAGTGCCACGGCTCTTGATCTTGCGCGCCTGATGGATAAGCCGCAAAGCCGTCAATGGCTGCTTGAGGCCCTGAAAT
CCCACGCAGGTTCCTGTGACCTTGTTCTTTTGCCGCCCGTCTGCGGGAGCAAGGCCCGGCCGGATACCTGGCAGGCCGTT
GAAGCCGCTGCGGAATGTCCTGTTGTGGAAATGCTGTCCATTCCTCCGGGAGTGGGGGGGCTGAGGCTGCGCGATGCGCT
TTTGCGGGCCTTACGGGAATATGATTTTGAACTTTTTGAAAATGCCAGGGTGCTTCACGCTGAAACTGCCGGTAAAAAAT
GCACGGCGCTTGTGGCTGAGGCCTCCGGCCAGGAGCGCCGCCACGAGGCCCGCACGTTTGTGCTTGCTACGGGCGGTATT
CTGGGGGGCGGACTTGACCTGGCTCCCGGTTCCGCGCGTGAAAGCATCATGGGGCTGGATATTGCCGTGCCGGATGATGT
GGAGCTGTGGTCGGAAGCCGAGCTTTTCGGCAAGCATCTGTTTGCCCGCATGGGGGTGCGTGTGGACAGCACCATGCGCC
CGGTAAGTTCCCAGGCCGCGGTTTGCTGGAATAACGTTTTTTTTGCGGGGCGCAGCCTGGGCGGCTACGATTACGCAACG
GAAAAGAGCGGTCACGGCGTTGCCGTCGCCACCGGCTGGCAGGCCGGACGTATGGCCGCGGCGGCAGCCTCGGAGGAAAG
TATATGA

Upstream 100 bases:

>100_bases
TGGGGCGGGCTGCGCTTTGCCCTATGGGGCATGCAGGCCCGTGAAATGGAACTGAGCCGTGCCATTTACGCTACTACCCT
CAACCTGGATGGAGCCGCTC

Downstream 100 bases:

>100_bases
GCACGCGCATAAATCCCGATCACTGCATCGCCTGCACCACCTGCGTTGTGCATTGTCCCGTGGCTGACGCTACTTCAAAG
TTTCTTGGTCCCCGCATGAT

Product: anaerobic glycerol-3-phosphate dehydrogenase subunit B

Products: NA

Alternate protein names: Anaerobic G-3-P dehydrogenase subunit B; Anaerobic G3Pdhase B [H]

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSRIVDVLVAGSGMAGLVAALTAASQGKKVRMLTTGMGSLAISGGNVDVLAYADGRYVSDPWAGMALLPAEHPYRLMGAE
CVREAIAFFLRQMEARQWPMQAASTPSGQACNVQMPTIMGTLKPTHLLPAGVNIKALNEARRILVVSVEGLRDCRPALVI
SQLQRYRAWADREFAQLTVSSPLGETHRSATALDLARLMDKPQSRQWLLEALKSHAGSCDLVLLPPVCGSKARPDTWQAV
EAAAECPVVEMLSIPPGVGGLRLRDALLRALREYDFELFENARVLHAETAGKKCTALVAEASGQERRHEARTFVLATGGI
LGGGLDLAPGSARESIMGLDIAVPDDVELWSEAELFGKHLFARMGVRVDSTMRPVSSQAAVCWNNVFFAGRSLGGYDYAT
EKSGHGVAVATGWQAGRMAAAAASEESI

Sequences:

>Translated_428_residues
MSRIVDVLVAGSGMAGLVAALTAASQGKKVRMLTTGMGSLAISGGNVDVLAYADGRYVSDPWAGMALLPAEHPYRLMGAE
CVREAIAFFLRQMEARQWPMQAASTPSGQACNVQMPTIMGTLKPTHLLPAGVNIKALNEARRILVVSVEGLRDCRPALVI
SQLQRYRAWADREFAQLTVSSPLGETHRSATALDLARLMDKPQSRQWLLEALKSHAGSCDLVLLPPVCGSKARPDTWQAV
EAAAECPVVEMLSIPPGVGGLRLRDALLRALREYDFELFENARVLHAETAGKKCTALVAEASGQERRHEARTFVLATGGI
LGGGLDLAPGSARESIMGLDIAVPDDVELWSEAELFGKHLFARMGVRVDSTMRPVSSQAAVCWNNVFFAGRSLGGYDYAT
EKSGHGVAVATGWQAGRMAAAAASEESI
>Mature_427_residues
SRIVDVLVAGSGMAGLVAALTAASQGKKVRMLTTGMGSLAISGGNVDVLAYADGRYVSDPWAGMALLPAEHPYRLMGAEC
VREAIAFFLRQMEARQWPMQAASTPSGQACNVQMPTIMGTLKPTHLLPAGVNIKALNEARRILVVSVEGLRDCRPALVIS
QLQRYRAWADREFAQLTVSSPLGETHRSATALDLARLMDKPQSRQWLLEALKSHAGSCDLVLLPPVCGSKARPDTWQAVE
AAAECPVVEMLSIPPGVGGLRLRDALLRALREYDFELFENARVLHAETAGKKCTALVAEASGQERRHEARTFVLATGGIL
GGGLDLAPGSARESIMGLDIAVPDDVELWSEAELFGKHLFARMGVRVDSTMRPVSSQAAVCWNNVFFAGRSLGGYDYATE
KSGHGVAVATGWQAGRMAAAAASEESI

Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor [H]

COG id: COG3075

COG function: function code E; Anaerobic glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic G-3-P dehydrogenase subunit B family [H]

Homologues:

Organism=Escherichia coli, GI1788575, Length=413, Percent_Identity=26.8765133171913, Blast_Score=114, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR009158 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 45738; Mature: 45607

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIVDVLVAGSGMAGLVAALTAASQGKKVRMLTTGMGSLAISGGNVDVLAYADGRYVSD
CCHHEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEEEECCCCCCC
PWAGMALLPAEHPYRLMGAECVREAIAFFLRQMEARQWPMQAASTPSGQACNVQMPTIMG
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCHHHC
TLKPTHLLPAGVNIKALNEARRILVVSVEGLRDCRPALVISQLQRYRAWADREFAQLTVS
CCCCCEECCCCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEC
SPLGETHRSATALDLARLMDKPQSRQWLLEALKSHAGSCDLVLLPPVCGSKARPDTWQAV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHH
EAAAECPVVEMLSIPPGVGGLRLRDALLRALREYDFELFENARVLHAETAGKKCTALVAE
HHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCHHEEEEEC
ASGQERRHEARTFVLATGGILGGGLDLAPGSARESIMGLDIAVPDDVELWSEAELFGKHL
CCCHHHHHHHEEEEEEECCEECCCCCCCCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHH
FARMGVRVDSTMRPVSSQAAVCWNNVFFAGRSLGGYDYATEKSGHGVAVATGWQAGRMAA
HHHHCCCCCCCCCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHH
AAASEESI
HCCCCCCC
>Mature Secondary Structure 
SRIVDVLVAGSGMAGLVAALTAASQGKKVRMLTTGMGSLAISGGNVDVLAYADGRYVSD
CHHEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEEEECCCCCCC
PWAGMALLPAEHPYRLMGAECVREAIAFFLRQMEARQWPMQAASTPSGQACNVQMPTIMG
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCHHHC
TLKPTHLLPAGVNIKALNEARRILVVSVEGLRDCRPALVISQLQRYRAWADREFAQLTVS
CCCCCEECCCCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEC
SPLGETHRSATALDLARLMDKPQSRQWLLEALKSHAGSCDLVLLPPVCGSKARPDTWQAV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHH
EAAAECPVVEMLSIPPGVGGLRLRDALLRALREYDFELFENARVLHAETAGKKCTALVAE
HHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCHHEEEEEC
ASGQERRHEARTFVLATGGILGGGLDLAPGSARESIMGLDIAVPDDVELWSEAELFGKHL
CCCHHHHHHHEEEEEEECCEECCCCCCCCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHH
FARMGVRVDSTMRPVSSQAAVCWNNVFFAGRSLGGYDYATEKSGHGVAVATGWQAGRMAA
HHHHCCCCCCCCCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHH
AAASEESI
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA