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The map label for this gene is 220904780

Identifier: 220904780

GI number: 220904780

Start: 1805261

End: 1806211

Strand: Reverse

Name: 220904780

Synonym: Ddes_1512

Alternate gene names: NA

Gene position: 1806211-1805261 (Counterclockwise)

Preceding gene: 220904781

Following gene: 220904779

Centisome position: 62.86

GC content: 59.94

Gene sequence:

>951_bases
ATGAAGAGTTGCGGCGTTGCAGAAAAATCCCTCAGTATGGCCAGGACTGAACAGGTCTGCGTGAAAACGGTATTTCCCGG
CAACGTGGTATTTTTTCTGATTTCTTTGGCTCTGCATACTGCTGCGCTCGCTGCCTTGTGGTTTCTGGCCGTTCCTGCAG
CGGGCATAGGGCAAGGCGAGGGTGCGGGGGGATATATTACGGTCAGCCTGCTGCCCGGACCACCGGGCGATTCCGGCAGT
GGGGAATCTTCTGCCTCATCGCCGGATGCTGCTGACGGCGCATCCGCATCTGCACCGGCTACAGCCGACAGGGCCGTTGA
ACCTTCCGCTGCTCCTCCCGCCACGGATACCGTCCATGCCGCGGATATTGATCCGAAAAGGCCTGCTGCCGCCCCGGCAG
AGCCGGTGCCCCCTGTTCCTGCTGCCATTCCCGTGCGCAAGATAAAAGACGAACAGAAAGCCAAAGCCAAAAACCGAAAG
GCCGAGAGAACTGTCGTAGAAAAGGCCGCTCCCGAACATGCACGGCGCACCCTTGATGACAGGGAGCAAAAGAGCGGAAG
AGCCTCGGCCGCGGGCCGTGAACAAGCAGGTACGGCTGGGGGACGCGGCGGTCAGGGCGGAGAAAAAGGCGGCGCAGGCG
GAAAAAGCAGCGCTGCCGCGGCTGGAAGCTCCGCCGGATATCTGAAGGGAAATTACGAATATATCAAAAAACGCGTCAGG
CAGTATCTGGTGTACAACCCGCAGGCCAAGCGTATGGGCATTCAGGGTATGGTGACTGTAGCATTTACCATTCAGCAGGA
CGGCAGGGTCAGGGATGTTGCGGTCAGTAAAAGCAGCGGCCATTCCCTGCTGGACGAATCCGCCCTTGAGGCGGTGCGCA
GCGCAGCGCCTTTTGCAGCGCCACCGGAACCGGCGCGAGTGATCATGCCCGTGCAGTTCAGCCTGAGGTAG

Upstream 100 bases:

>100_bases
GTCCTGTGGCTTCGGTCATTACCGAGGAGCAGGTGCGGAAACTTTATGAACTGCCGCCCAAGGCTGAAGTATGGATGCGC
CTGACCGGGACGAGCACAGC

Downstream 100 bases:

>100_bases
TGAGGTGATCATGTTTTTTGCAAGACCCCTGTTTTTTCTTTTTCTGCTGTTTTGTACTGCGGTTCCGGCCCTGGCGGACA
TAAAAATATTTATCACCAAT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKSCGVAEKSLSMARTEQVCVKTVFPGNVVFFLISLALHTAALAALWFLAVPAAGIGQGEGAGGYITVSLLPGPPGDSGS
GESSASSPDAADGASASAPATADRAVEPSAAPPATDTVHAADIDPKRPAAAPAEPVPPVPAAIPVRKIKDEQKAKAKNRK
AERTVVEKAAPEHARRTLDDREQKSGRASAAGREQAGTAGGRGGQGGEKGGAGGKSSAAAAGSSAGYLKGNYEYIKKRVR
QYLVYNPQAKRMGIQGMVTVAFTIQQDGRVRDVAVSKSSGHSLLDESALEAVRSAAPFAAPPEPARVIMPVQFSLR

Sequences:

>Translated_316_residues
MKSCGVAEKSLSMARTEQVCVKTVFPGNVVFFLISLALHTAALAALWFLAVPAAGIGQGEGAGGYITVSLLPGPPGDSGS
GESSASSPDAADGASASAPATADRAVEPSAAPPATDTVHAADIDPKRPAAAPAEPVPPVPAAIPVRKIKDEQKAKAKNRK
AERTVVEKAAPEHARRTLDDREQKSGRASAAGREQAGTAGGRGGQGGEKGGAGGKSSAAAAGSSAGYLKGNYEYIKKRVR
QYLVYNPQAKRMGIQGMVTVAFTIQQDGRVRDVAVSKSSGHSLLDESALEAVRSAAPFAAPPEPARVIMPVQFSLR
>Mature_316_residues
MKSCGVAEKSLSMARTEQVCVKTVFPGNVVFFLISLALHTAALAALWFLAVPAAGIGQGEGAGGYITVSLLPGPPGDSGS
GESSASSPDAADGASASAPATADRAVEPSAAPPATDTVHAADIDPKRPAAAPAEPVPPVPAAIPVRKIKDEQKAKAKNRK
AERTVVEKAAPEHARRTLDDREQKSGRASAAGREQAGTAGGRGGQGGEKGGAGGKSSAAAAGSSAGYLKGNYEYIKKRVR
QYLVYNPQAKRMGIQGMVTVAFTIQQDGRVRDVAVSKSSGHSLLDESALEAVRSAAPFAAPPEPARVIMPVQFSLR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32287; Mature: 32287

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSCGVAEKSLSMARTEQVCVKTVFPGNVVFFLISLALHTAALAALWFLAVPAAGIGQGE
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GAGGYITVSLLPGPPGDSGSGESSASSPDAADGASASAPATADRAVEPSAAPPATDTVHA
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
ADIDPKRPAAAPAEPVPPVPAAIPVRKIKDEQKAKAKNRKAERTVVEKAAPEHARRTLDD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
REQKSGRASAAGREQAGTAGGRGGQGGEKGGAGGKSSAAAAGSSAGYLKGNYEYIKKRVR
HHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH
QYLVYNPQAKRMGIQGMVTVAFTIQQDGRVRDVAVSKSSGHSLLDESALEAVRSAAPFAA
HHHHCCCHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
PPEPARVIMPVQFSLR
CCCCCEEEEEEEEECC
>Mature Secondary Structure
MKSCGVAEKSLSMARTEQVCVKTVFPGNVVFFLISLALHTAALAALWFLAVPAAGIGQGE
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GAGGYITVSLLPGPPGDSGSGESSASSPDAADGASASAPATADRAVEPSAAPPATDTVHA
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
ADIDPKRPAAAPAEPVPPVPAAIPVRKIKDEQKAKAKNRKAERTVVEKAAPEHARRTLDD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
REQKSGRASAAGREQAGTAGGRGGQGGEKGGAGGKSSAAAAGSSAGYLKGNYEYIKKRVR
HHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH
QYLVYNPQAKRMGIQGMVTVAFTIQQDGRVRDVAVSKSSGHSLLDESALEAVRSAAPFAA
HHHHCCCHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
PPEPARVIMPVQFSLR
CCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA