| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904705
Identifier: 220904705
GI number: 220904705
Start: 1722037
End: 1722870
Strand: Direct
Name: 220904705
Synonym: Ddes_1437
Alternate gene names: NA
Gene position: 1722037-1722870 (Clockwise)
Preceding gene: 220904695
Following gene: 220904706
Centisome position: 59.93
GC content: 54.32
Gene sequence:
>834_bases ATGAAGGTAATAGATTTTCGTTTCCGTCCCAATACTCCCGAAATTATCGACGGCATCAAAAACAGCAGCATGTTCAAGGC TGCATGCAAGGCCATCGGTTTTGACCAGCGCAAGCCTCAGCCTCTGGAAGACATTGTGGCCGGCCTGGAACGTCTTGACG TGGAGCTTGGGGTCATCACCGGACGCGATTGTGAAACAACTTATGGTTTTCCTGCCAACAACCAGAGCGTGCTTGAATTC TGCCGGGCCTACCCACAAAAGTTTGTGGGGTTCTGGGGCATTGACCCGCACAAAAAAATGGCCGCCCTGCGCGAAATCGA GCTTGTATCCTCCGAATACGGCATGAAGGGCATCGCCATCGATCCGTATCTTGCCCACATTCCTGCATCTGAAGCACGCT TTTACCCTCTCTACGCCAAGTGCTGCGAACTGGGCCTGCCCGTATTCATCACAATGGCTCCACCGCCTCAGGTTCCCGGA GCCATTCTGGAATACGCCGACCCGCGCGATGTGGATAAGGTGGCCCGGGATTTTCCCGAGCTTACACTCATCATGAGCCA CGGCGGCTATCCATTTGTGAATGAAGCTGTTTATACCTGCCTTCGTAACGCCAACGTGTACATGGATATTTCAGAATATG AACGTGCGCCTATGGTGGATGTGTATGTGCAGGCCATGAACGGGCTGATCACGGACAAGGTGCTTTTTGCCAGCGCCCAC CCCTTTGTGGAACTGGCCGACGCCCTGGAAGCCTACCGCGAGTTTGACCTGACTGATGAGGCCCGCCGCAAAATCATGTA TGAAAACGCCCGCCGCGTGCTGGGCCTGGCATAA
Upstream 100 bases:
>100_bases TACATAACGTAAACGCTTCTTGCAGCCCGCACCTTCATAAACACCACAGGGCGTGCCGCAACGCCTTTACAGCAGATCAG GCACGCGGGGAGAGATGGAA
Downstream 100 bases:
>100_bases AGGAGAACGGTATGAGTGTTGCCGCCAATGACAAGCAGGCGCAAAAAAACCTGCGCCGCGTGGTGATTTCCTCCCTTATG GGCGCGGTTATCGAATGGTA
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Hydrolase; PE-PGRS Family Protein; Antibiotic-Resistance Protein; Amidohydrolase Family
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKVIDFRFRPNTPEIIDGIKNSSMFKAACKAIGFDQRKPQPLEDIVAGLERLDVELGVITGRDCETTYGFPANNQSVLEF CRAYPQKFVGFWGIDPHKKMAALREIELVSSEYGMKGIAIDPYLAHIPASEARFYPLYAKCCELGLPVFITMAPPPQVPG AILEYADPRDVDKVARDFPELTLIMSHGGYPFVNEAVYTCLRNANVYMDISEYERAPMVDVYVQAMNGLITDKVLFASAH PFVELADALEAYREFDLTDEARRKIMYENARRVLGLA
Sequences:
>Translated_277_residues MKVIDFRFRPNTPEIIDGIKNSSMFKAACKAIGFDQRKPQPLEDIVAGLERLDVELGVITGRDCETTYGFPANNQSVLEF CRAYPQKFVGFWGIDPHKKMAALREIELVSSEYGMKGIAIDPYLAHIPASEARFYPLYAKCCELGLPVFITMAPPPQVPG AILEYADPRDVDKVARDFPELTLIMSHGGYPFVNEAVYTCLRNANVYMDISEYERAPMVDVYVQAMNGLITDKVLFASAH PFVELADALEAYREFDLTDEARRKIMYENARRVLGLA >Mature_277_residues MKVIDFRFRPNTPEIIDGIKNSSMFKAACKAIGFDQRKPQPLEDIVAGLERLDVELGVITGRDCETTYGFPANNQSVLEF CRAYPQKFVGFWGIDPHKKMAALREIELVSSEYGMKGIAIDPYLAHIPASEARFYPLYAKCCELGLPVFITMAPPPQVPG AILEYADPRDVDKVARDFPELTLIMSHGGYPFVNEAVYTCLRNANVYMDISEYERAPMVDVYVQAMNGLITDKVLFASAH PFVELADALEAYREFDLTDEARRKIMYENARRVLGLA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31195; Mature: 31195
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIDFRFRPNTPEIIDGIKNSSMFKAACKAIGFDQRKPQPLEDIVAGLERLDVELGVIT CCEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCEEEEEEE GRDCETTYGFPANNQSVLEFCRAYPQKFVGFWGIDPHKKMAALREIELVSSEYGMKGIAI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE DPYLAHIPASEARFYPLYAKCCELGLPVFITMAPPPQVPGAILEYADPRDVDKVARDFPE CCHHHHCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHCCCC LTLIMSHGGYPFVNEAVYTCLRNANVYMDISEYERAPMVDVYVQAMNGLITDKVLFASAH EEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCC PFVELADALEAYREFDLTDEARRKIMYENARRVLGLA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVIDFRFRPNTPEIIDGIKNSSMFKAACKAIGFDQRKPQPLEDIVAGLERLDVELGVIT CCEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCEEEEEEE GRDCETTYGFPANNQSVLEFCRAYPQKFVGFWGIDPHKKMAALREIELVSSEYGMKGIAI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE DPYLAHIPASEARFYPLYAKCCELGLPVFITMAPPPQVPGAILEYADPRDVDKVARDFPE CCHHHHCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHCCCC LTLIMSHGGYPFVNEAVYTCLRNANVYMDISEYERAPMVDVYVQAMNGLITDKVLFASAH EEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCC PFVELADALEAYREFDLTDEARRKIMYENARRVLGLA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA