Click here to switch to the map view.

The map label for this gene is crp [C]

Identifier: 220904679

GI number: 220904679

Start: 1686882

End: 1687727

Strand: Reverse

Name: crp [C]

Synonym: Ddes_1411

Alternate gene names: 220904679

Gene position: 1687727-1686882 (Counterclockwise)

Preceding gene: 220904681

Following gene: 220904670

Centisome position: 58.74

GC content: 51.42

Gene sequence:

>846_bases
ATGCACGCGGGAAAACGCGTGCTCTTTTTGTGGCGAATTTTTCTGTCCGCAAGCCAGGCCTGCCCGAGGGGGCGCTTTCA
TCGATCAGGCGGCTTGCCATCCGTTTTTTTTATCCGGTCAAAGTCTGGCAGGAATATAACCTCTTTATATAAGGGGAATG
CCGTGTCTTTTACAGAATTGGTCAAGCATAACGAATGCTGGCGTGATGTCGTTGCAGGCAGGCCGCGTCAGTGGAAAAAG
GGCTATAAATTCGCGGACGACACTGCGCGGATGTATTTTCTGGTCAGCGGCAGAGTCCGCCTGGTGGCTCTGGCGGCCGA
TGGCGGCGAAAAAACCCTCTGGTATCTGGGCGATGGGTGCTGCTTTAATGAAACGCCGCTTTTTGAGGACGATCAAGAGA
AAAATCTTATCCGGACGGGAGATGCAAGATTTTATCATGAGTGCATGGAAAATTGCTATCTGCACACATTTACCATGCAG
GATGTGAAAATGCTCGGCAAAGAGCGGCCTGAGCTGTTGCTCAATCTTTGTCAGAGCTATGCAACCAAGGTGACGCTGCT
TTCGCAGCACCTGGTGTCTCTAAGTCTGGAATCCCAACTGACCAGGGTGTGTAAATATCTTGCTTCACGTCTGGTTCCCG
GTTCTGTTCCCTTGCGGGCCAGGCGGGATCTTTCGTATCGGGAGATGGCCGACTTGCTTGGTATGCACCGCATTTCACTC
TACAAGGTCATGCGGCAGGCCCAGGATCAGGGTTTGTGGGACTTTGATAAAAACAGCGATGAAATTGTCATTCTGCAGCC
AGCGGTTTTTTTTGAAGAGGCGCATACCATGCCACCTTTGGCCTGA

Upstream 100 bases:

>100_bases
GCAGGGCGGCCATGAGATAAGTTTCTCAAGAACGGCGTGGTTCCACGGTGTTCGTGAAAAGATGTTGCAACAGCATGAAA
CTTGAAGCCGGAAAAATGTG

Downstream 100 bases:

>100_bases
ACCCGGCTGGATATTCGCCATCCACAACGCCCCCCGCAGGCATGCCTGCGGGGGGCGTTGTGGATGGCGTGCTGCACCCG
AAGTTATAGAGTATTACTTC

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator TrmB

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MHAGKRVLFLWRIFLSASQACPRGRFHRSGGLPSVFFIRSKSGRNITSLYKGNAVSFTELVKHNECWRDVVAGRPRQWKK
GYKFADDTARMYFLVSGRVRLVALAADGGEKTLWYLGDGCCFNETPLFEDDQEKNLIRTGDARFYHECMENCYLHTFTMQ
DVKMLGKERPELLLNLCQSYATKVTLLSQHLVSLSLESQLTRVCKYLASRLVPGSVPLRARRDLSYREMADLLGMHRISL
YKVMRQAQDQGLWDFDKNSDEIVILQPAVFFEEAHTMPPLA

Sequences:

>Translated_281_residues
MHAGKRVLFLWRIFLSASQACPRGRFHRSGGLPSVFFIRSKSGRNITSLYKGNAVSFTELVKHNECWRDVVAGRPRQWKK
GYKFADDTARMYFLVSGRVRLVALAADGGEKTLWYLGDGCCFNETPLFEDDQEKNLIRTGDARFYHECMENCYLHTFTMQ
DVKMLGKERPELLLNLCQSYATKVTLLSQHLVSLSLESQLTRVCKYLASRLVPGSVPLRARRDLSYREMADLLGMHRISL
YKVMRQAQDQGLWDFDKNSDEIVILQPAVFFEEAHTMPPLA
>Mature_281_residues
MHAGKRVLFLWRIFLSASQACPRGRFHRSGGLPSVFFIRSKSGRNITSLYKGNAVSFTELVKHNECWRDVVAGRPRQWKK
GYKFADDTARMYFLVSGRVRLVALAADGGEKTLWYLGDGCCFNETPLFEDDQEKNLIRTGDARFYHECMENCYLHTFTMQ
DVKMLGKERPELLLNLCQSYATKVTLLSQHLVSLSLESQLTRVCKYLASRLVPGSVPLRARRDLSYREMADLLGMHRISL
YKVMRQAQDQGLWDFDKNSDEIVILQPAVFFEEAHTMPPLA

Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32302; Mature: 32302

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAGKRVLFLWRIFLSASQACPRGRFHRSGGLPSVFFIRSKSGRNITSLYKGNAVSFTEL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHH
VKHNECWRDVVAGRPRQWKKGYKFADDTARMYFLVSGRVRLVALAADGGEKTLWYLGDGC
HHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEECCC
CFNETPLFEDDQEKNLIRTGDARFYHECMENCYLHTFTMQDVKMLGKERPELLLNLCQSY
CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEEEEEHHHHHHHHHCCCHHHHHHHHHHH
ATKVTLLSQHLVSLSLESQLTRVCKYLASRLVPGSVPLRARRDLSYREMADLLGMHRISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH
YKVMRQAQDQGLWDFDKNSDEIVILQPAVFFEEAHTMPPLA
HHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCC
>Mature Secondary Structure
MHAGKRVLFLWRIFLSASQACPRGRFHRSGGLPSVFFIRSKSGRNITSLYKGNAVSFTEL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHH
VKHNECWRDVVAGRPRQWKKGYKFADDTARMYFLVSGRVRLVALAADGGEKTLWYLGDGC
HHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEECCC
CFNETPLFEDDQEKNLIRTGDARFYHECMENCYLHTFTMQDVKMLGKERPELLLNLCQSY
CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEEEEEHHHHHHHHHCCCHHHHHHHHHHH
ATKVTLLSQHLVSLSLESQLTRVCKYLASRLVPGSVPLRARRDLSYREMADLLGMHRISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH
YKVMRQAQDQGLWDFDKNSDEIVILQPAVFFEEAHTMPPLA
HHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA