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The map label for this gene is yloC [H]

Identifier: 220904672

GI number: 220904672

Start: 1680217

End: 1681098

Strand: Direct

Name: yloC [H]

Synonym: Ddes_1404

Alternate gene names: 220904672

Gene position: 1680217-1681098 (Clockwise)

Preceding gene: 220904671

Following gene: 220904673

Centisome position: 58.47

GC content: 57.6

Gene sequence:

>882_bases
ATGCTCCGCAGCATGACCGGCTTTGGCCGCTGCCTCGTTGAAAATACCCGCACGATCCAGCAATGGGAAGTCAAAAGCGT
CAACAGCCGCCATCTTGATCTCAAATGGCGTCTCCCCCTGCCTGTGCGCAGCCTCGAACCCCGCCTTGAAAAGGTCGTTC
GCCGCTTCGCCTCGCGTGGGCGGGTAGACATAAGCCTGACCTTGCAATACGCCCCGGGCGAAGTTCCTGTGGCGCGCTTT
GATGCCGGGCAGGCCAATGCCATGCTCGACAGCCTGCACGATCTGGCCCTGGCCCGTGGCGATGATTTTATGCCGGACTA
CAGCGCGCTCATGCAGATTTCCTCGCTCTGGAATGACACCAGCGAAGAAATGGATGAGGATGTGACAACCAGCCTTGAAG
AAGGGCTTGCTCTCGCCCTTGAAGACTGGAACGAGGCCCGCGCCGCCGAAGGCCGTGCTCTGGCCACAGACATGCACTCA
CGCATTCTGCGCATGGAAGAATGGACCGGCCTTATCGCCGAACGTGCTCCGGCCATAAAAGAAGAGCGTGCCAATATCAT
GCGTGAACGCCTGGGCGAGGCCCTGGCGCAGAACGGGCAAGAACTGGAAGAAGGCCGTTTTTTACAAGAAATTGTAGTAC
TTGCCGACCGGCTGGATGTGAGCGAAGAGCTTACCCGCCTTTCGACCCATCTTGAACGGCTGCATGATCTTTTGCAGGCG
GGACGCGATGCGGGCCGCCGCCTCGACTTCACCCTTCAGGAATGCTTTCGCGAAATCAACACATGCGGCAACAAACTGCC
TGATGTGCAGTTATCGCGCCTTGTTGTAGACTTCAAGAATGAACTGGAAAAATGCCGCGAGCAGGTCCAGAATCTGGAAT
AG

Upstream 100 bases:

>100_bases
AAAATATTCAGCCCTTGGCCCGGCGTGCCAAGGGCTTTCTTGCATTCGTCAAGGCCTTGCTCTACACTCGCCCCAATACT
CTATATATGGGAAGGAACCT

Downstream 100 bases:

>100_bases
GTCATGTCTCGCGAACGACTCATCAATATCGGTTTCGGAAACTATGTGCTGGCGGGCCGGGTTGTAGGCATTGTCAGCCC
CGCGTCTTCTCCCATGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLRSMTGFGRCLVENTRTIQQWEVKSVNSRHLDLKWRLPLPVRSLEPRLEKVVRRFASRGRVDISLTLQYAPGEVPVARF
DAGQANAMLDSLHDLALARGDDFMPDYSALMQISSLWNDTSEEMDEDVTTSLEEGLALALEDWNEARAAEGRALATDMHS
RILRMEEWTGLIAERAPAIKEERANIMRERLGEALAQNGQELEEGRFLQEIVVLADRLDVSEELTRLSTHLERLHDLLQA
GRDAGRRLDFTLQECFREINTCGNKLPDVQLSRLVVDFKNELEKCREQVQNLE

Sequences:

>Translated_293_residues
MLRSMTGFGRCLVENTRTIQQWEVKSVNSRHLDLKWRLPLPVRSLEPRLEKVVRRFASRGRVDISLTLQYAPGEVPVARF
DAGQANAMLDSLHDLALARGDDFMPDYSALMQISSLWNDTSEEMDEDVTTSLEEGLALALEDWNEARAAEGRALATDMHS
RILRMEEWTGLIAERAPAIKEERANIMRERLGEALAQNGQELEEGRFLQEIVVLADRLDVSEELTRLSTHLERLHDLLQA
GRDAGRRLDFTLQECFREINTCGNKLPDVQLSRLVVDFKNELEKCREQVQNLE
>Mature_293_residues
MLRSMTGFGRCLVENTRTIQQWEVKSVNSRHLDLKWRLPLPVRSLEPRLEKVVRRFASRGRVDISLTLQYAPGEVPVARF
DAGQANAMLDSLHDLALARGDDFMPDYSALMQISSLWNDTSEEMDEDVTTSLEEGLALALEDWNEARAAEGRALATDMHS
RILRMEEWTGLIAERAPAIKEERANIMRERLGEALAQNGQELEEGRFLQEIVVLADRLDVSEELTRLSTHLERLHDLLQA
GRDAGRRLDFTLQECFREINTCGNKLPDVQLSRLVVDFKNELEKCREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=303, Percent_Identity=31.6831683168317, Blast_Score=121, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33528; Mature: 33528

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSMTGFGRCLVENTRTIQQWEVKSVNSRHLDLKWRLPLPVRSLEPRLEKVVRRFASRG
CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHCC
RVDISLTLQYAPGEVPVARFDAGQANAMLDSLHDLALARGDDFMPDYSALMQISSLWNDT
CEEEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
SEEMDEDVTTSLEEGLALALEDWNEARAAEGRALATDMHSRILRMEEWTGLIAERAPAIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EERANIMRERLGEALAQNGQELEEGRFLQEIVVLADRLDVSEELTRLSTHLERLHDLLQA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GRDAGRRLDFTLQECFREINTCGNKLPDVQLSRLVVDFKNELEKCREQVQNLE
HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRSMTGFGRCLVENTRTIQQWEVKSVNSRHLDLKWRLPLPVRSLEPRLEKVVRRFASRG
CCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHCC
RVDISLTLQYAPGEVPVARFDAGQANAMLDSLHDLALARGDDFMPDYSALMQISSLWNDT
CEEEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
SEEMDEDVTTSLEEGLALALEDWNEARAAEGRALATDMHSRILRMEEWTGLIAERAPAIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EERANIMRERLGEALAQNGQELEEGRFLQEIVVLADRLDVSEELTRLSTHLERLHDLLQA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GRDAGRRLDFTLQECFREINTCGNKLPDVQLSRLVVDFKNELEKCREQVQNLE
HHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]