Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
---|---|
Accession | NC_011883 |
Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904668
Identifier: 220904668
GI number: 220904668
Start: 1676047
End: 1677102
Strand: Reverse
Name: 220904668
Synonym: Ddes_1400
Alternate gene names: NA
Gene position: 1677102-1676047 (Counterclockwise)
Preceding gene: 220904670
Following gene: 220904664
Centisome position: 58.37
GC content: 61.65
Gene sequence:
>1056_bases ATGAAGTGTCACATAAAGAAATTATCCACCTTTCTGATGGGTTGTACCCTGCTTCTGATGACAGCCGCCGACTTTTGTGC CGCGACGAACCACGATCTGCCCGTTTCTGATACTGGGATCATGAGGCAGGACGGCCCCTTGCCCGCCGGCTTTCGTGTGC CATGCGCCAGCGGTCCGGCTGTGCCGCCGGAGGCGTGGCCGGAGGAACAGTTGGGTGGGCCGTCTGATGCGTTGCCGGAG GGTCTGGATGACGCCGCGCGTCTGGATGTGTACTGTCTGCGGGCTTCCTATCCGGAAATTGCCGGAATGGTTACGGACGA CAGCGGTTTGTGGCTGCTTGTGGGTGGTGGCCGCCGGGTGCTTTATGCGCGGCATGCCGACAGCGGATCGGCATTGAGCC ATGCGGGTTCCGGCAATGGCGAAAAGGGCTGGGCCGTGGATGTGCGCTCCAGTATGGCAGACGCGTATCCCCTTGAGCCG GAGCGGCCGGACACGCCCTACGGTGTTTCGCCGGGGCGGCGGCGTTCCTATGATCTTTTGGGTGCGATTTACGGGCATAA TGCTTCTGAGGTGGGCAGGCAGGTCCGTCAGACAACACTGCTCGGGCAGCCCTTGCGTCTTTCCGCTTCGGCGGCCCGGG CGCTGGGTCGGGCCGATGCGCGCCTTGCCGTTGCCGTAGGTGCAGAGCCACATTTAAAAGATTACCTGAAGGTGCACGGC GGTTTTGTGTGGCGGCGTATAGCGGGCGAGACTCGATTGAGTCCGCATGCTTATGGCATTGCTGTAGATTTGAGCCCGCG GCTGGCCCCGTACTGGCGCTGGAACAAGCTGCGCCCCCACCCCATGCAGCACGGATATCCTTTCGCCATCGTGGATGCTA TGGAGCAGGCGGGTTTCATATGGGGCGGCAAGTGGCATGAATACGATATCATGCATTTTGAATATCGGCCGGAAATCATC TGCAAGGCGCGCATGCTTCAGGCCCGGCGCGGGCAGGGAGGCGCAGGTGATGGCCCGGCGCATGCGGCAGGTGCGGTACT TTTTCCGGCAGACTGA
Upstream 100 bases:
>100_bases TTGCAGCCGAACGTGACCAAAAAGAAATTCCAGACAGACATGGCGCTGGTGTACGCAAAAGCGCTTGCCTTGACAAGCGG AGCGCGGGTAGGCTTGGTAC
Downstream 100 bases:
>100_bases TTCTTTTGTGTGCTATTCCTTGCTTTTGTCGGTAGTGAGCAGCAGGACGGCCCCAAGCACCAGCGCACCACCAAGCCAGC CCAGCGGAGTAAAGTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKCHIKKLSTFLMGCTLLLMTAADFCAATNHDLPVSDTGIMRQDGPLPAGFRVPCASGPAVPPEAWPEEQLGGPSDALPE GLDDAARLDVYCLRASYPEIAGMVTDDSGLWLLVGGGRRVLYARHADSGSALSHAGSGNGEKGWAVDVRSSMADAYPLEP ERPDTPYGVSPGRRRSYDLLGAIYGHNASEVGRQVRQTTLLGQPLRLSASAARALGRADARLAVAVGAEPHLKDYLKVHG GFVWRRIAGETRLSPHAYGIAVDLSPRLAPYWRWNKLRPHPMQHGYPFAIVDAMEQAGFIWGGKWHEYDIMHFEYRPEII CKARMLQARRGQGGAGDGPAHAAGAVLFPAD
Sequences:
>Translated_351_residues MKCHIKKLSTFLMGCTLLLMTAADFCAATNHDLPVSDTGIMRQDGPLPAGFRVPCASGPAVPPEAWPEEQLGGPSDALPE GLDDAARLDVYCLRASYPEIAGMVTDDSGLWLLVGGGRRVLYARHADSGSALSHAGSGNGEKGWAVDVRSSMADAYPLEP ERPDTPYGVSPGRRRSYDLLGAIYGHNASEVGRQVRQTTLLGQPLRLSASAARALGRADARLAVAVGAEPHLKDYLKVHG GFVWRRIAGETRLSPHAYGIAVDLSPRLAPYWRWNKLRPHPMQHGYPFAIVDAMEQAGFIWGGKWHEYDIMHFEYRPEII CKARMLQARRGQGGAGDGPAHAAGAVLFPAD >Mature_351_residues MKCHIKKLSTFLMGCTLLLMTAADFCAATNHDLPVSDTGIMRQDGPLPAGFRVPCASGPAVPPEAWPEEQLGGPSDALPE GLDDAARLDVYCLRASYPEIAGMVTDDSGLWLLVGGGRRVLYARHADSGSALSHAGSGNGEKGWAVDVRSSMADAYPLEP ERPDTPYGVSPGRRRSYDLLGAIYGHNASEVGRQVRQTTLLGQPLRLSASAARALGRADARLAVAVGAEPHLKDYLKVHG GFVWRRIAGETRLSPHAYGIAVDLSPRLAPYWRWNKLRPHPMQHGYPFAIVDAMEQAGFIWGGKWHEYDIMHFEYRPEII CKARMLQARRGQGGAGDGPAHAAGAVLFPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37941; Mature: 37941
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCHIKKLSTFLMGCTLLLMTAADFCAATNHDLPVSDTGIMRQDGPLPAGFRVPCASGPA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC VPPEAWPEEQLGGPSDALPEGLDDAARLDVYCLRASYPEIAGMVTDDSGLWLLVGGGRRV CCCCCCCHHHCCCCCCCCCCCCCCHHHEEEEEEECCCCHHCEEEECCCCEEEEECCCCEE LYARHADSGSALSHAGSGNGEKGWAVDVRSSMADAYPLEPERPDTPYGVSPGRRRSYDLL EEEEECCCCCHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH GAIYGHNASEVGRQVRQTTLLGQPLRLSASAARALGRADARLAVAVGAEPHLKDYLKVHG HHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHC GFVWRRIAGETRLSPHAYGIAVDLSPRLAPYWRWNKLRPHPMQHGYPFAIVDAMEQAGFI CEEEEECCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCE WGGKWHEYDIMHFEYRPEIICKARMLQARRGQGGAGDGPAHAAGAVLFPAD ECCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEECCC >Mature Secondary Structure MKCHIKKLSTFLMGCTLLLMTAADFCAATNHDLPVSDTGIMRQDGPLPAGFRVPCASGPA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC VPPEAWPEEQLGGPSDALPEGLDDAARLDVYCLRASYPEIAGMVTDDSGLWLLVGGGRRV CCCCCCCHHHCCCCCCCCCCCCCCHHHEEEEEEECCCCHHCEEEECCCCEEEEECCCCEE LYARHADSGSALSHAGSGNGEKGWAVDVRSSMADAYPLEPERPDTPYGVSPGRRRSYDLL EEEEECCCCCHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH GAIYGHNASEVGRQVRQTTLLGQPLRLSASAARALGRADARLAVAVGAEPHLKDYLKVHG HHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHC GFVWRRIAGETRLSPHAYGIAVDLSPRLAPYWRWNKLRPHPMQHGYPFAIVDAMEQAGFI CEEEEECCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCE WGGKWHEYDIMHFEYRPEIICKARMLQARRGQGGAGDGPAHAAGAVLFPAD ECCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA