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The map label for this gene is rpmB

Identifier: 220904652

GI number: 220904652

Start: 1659255

End: 1659464

Strand: Direct

Name: rpmB

Synonym: Ddes_1384

Alternate gene names: 220904652

Gene position: 1659255-1659464 (Clockwise)

Preceding gene: 220904651

Following gene: 220904653

Centisome position: 57.74

GC content: 56.19

Gene sequence:

>210_bases
ATGAGCAAGGAATGCATTTTCTGCGGCAAAAAGCCCCAGGTTGGTAACCTCGTCAGCCATTCCAATATCAAGACCAAGCG
TCGCTTCAACCCCAACCTCCAGCGTGTGCGCCACCAGTTTGCCGACGGCAGTGTGCGGACTCTTACTGTGTGCACCCGCT
GCCTGCGCTCTGGTGTTGTGACCAAACCCCTGGTGCGTAAGCAGGGTTAA

Upstream 100 bases:

>100_bases
CGCGGTTACGCCCTCATCATACGCTGTACATCTTCCGGCGCTGGGCTTTATTTTTGCCGCATGTGAAGTGAACTGTTTTT
TTGCATATACGGAGGATAGT

Downstream 100 bases:

>100_bases
TCAGCAGCCGCTTTGAGCTCAAGGCCCCGCAGTCTCTGTTGGGGCCTTTTTTACTATATGCGCTCTCCCTACAGCAGCAA
TCCGCCCGTCACCAACGGGC

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MSKECIFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQFADGSVRTLTVCTRCLRSGVVTKPLVRKQG

Sequences:

>Translated_69_residues
MSKECIFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQFADGSVRTLTVCTRCLRSGVVTKPLVRKQG
>Mature_68_residues
SKECIFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQFADGSVRTLTVCTRCLRSGVVTKPLVRKQG

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_DESDA (B8J0K9)

Other databases:

- EMBL:   CP001358
- RefSeq:   YP_002479964.1
- ProteinModelPortal:   B8J0K9
- GeneID:   7285079
- GenomeReviews:   CP001358_GR
- KEGG:   dds:Ddes_1384
- HOGENOM:   HBG597003
- ProtClustDB:   PRK00359
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 7811; Mature: 7680

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKECIFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQFADGSVRTLTVCTRCLRSGVV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCC
TKPLVRKQG
CCCHHCCCC
>Mature Secondary Structure 
SKECIFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQFADGSVRTLTVCTRCLRSGVV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCC
TKPLVRKQG
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA