| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904590
Identifier: 220904590
GI number: 220904590
Start: 1573086
End: 1573943
Strand: Direct
Name: 220904590
Synonym: Ddes_1322
Alternate gene names: NA
Gene position: 1573086-1573943 (Clockwise)
Preceding gene: 220904589
Following gene: 220904591
Centisome position: 54.75
GC content: 57.93
Gene sequence:
>858_bases ATGAGCAGACACGACATTTCCGATGAAAAGTGGGCCATAATCAGGCCTATGCTGGCGAAGACCGGTACTGAAACCAGAGG ACGCAAACGTAAAGACGACCGCCTGATATTTAATGCTATCCTGTGGATTATGAAAACAGGCGCACCGTGGCGGGACTTGC ATCCGGAGTTTGGGCCTTGGAACACAGTCAGCGCCGGCGCTGGCGGCCTTTCCATAACAGGAGGAAGCGCTTTTGCCGGA GTCCACGCGGAAAGCGGCGGCGCAAACGACATTATCAGCCATGGGGCCATAAATATCAAAGGACATCATGGCCTTCAGGC CGACGGAAGCAACAATCTTGTCACCGCTCACAACGGCGAGGTGACCATTTCCGGTTCGGGTGGGAGCTACGTCGACCCCG GTTCCGGCATACATGCCGCCAATGGTGGTACAAATACAATCACCGGAAACGCCCCGCTGACCGTTGCAATTACCACCACC GGGGCCACTGCTGAAAAGGCCATTGCCATGTGGGCCGATGGTGGCGGCTCTGTAAACTACATCACCGGCCATCCCCGGGC AGGAGGCCCGGGCGACAGCGTCACCCTCACCGCCAATAACGGCCAGGGCATCGCCATGCAGACTGAAAACGGCGGTAAAA ATATCATTACCACCGGCGCGGGCAACGACAGCGTGCTCATCAACGGCGCTGTCAAAGGCAACGGCAATGAAATCAATCTG GGCGGCGGCGACAACACCCTCACCATCAACGGCGCGGTGCAAACCGGCAGCCTGAACGTGATCGCTGCCGGTGGAACCTA CACCCTGGTACTTCAGGCATCCAATGCCGAAAACTTTGCCGCCCGCTACGGAGACTGA
Upstream 100 bases:
>100_bases CCGCCACTCAACATCTTTGCCTTGCGGCGCATGACGGCACTGCTAGGTGCTGTTTCTAAATAACATCTCGACTTTTCGTC GGTGCTGCTTTTGTTTTTCC
Downstream 100 bases:
>100_bases CTCAACGCCATTGGCTCTGACCCGCTTATTGCAGGCGGCATGACGGGCATCAGCTTTGAAGGTTTGAGCTTCTCCCCCCT GCCCACGGATTTTCTGTCAA
Product: transposase and inactivated derivatives-like protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives-Like Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSRHDISDEKWAIIRPMLAKTGTETRGRKRKDDRLIFNAILWIMKTGAPWRDLHPEFGPWNTVSAGAGGLSITGGSAFAG VHAESGGANDIISHGAINIKGHHGLQADGSNNLVTAHNGEVTISGSGGSYVDPGSGIHAANGGTNTITGNAPLTVAITTT GATAEKAIAMWADGGGSVNYITGHPRAGGPGDSVTLTANNGQGIAMQTENGGKNIITTGAGNDSVLINGAVKGNGNEINL GGGDNTLTINGAVQTGSLNVIAAGGTYTLVLQASNAENFAARYGD
Sequences:
>Translated_285_residues MSRHDISDEKWAIIRPMLAKTGTETRGRKRKDDRLIFNAILWIMKTGAPWRDLHPEFGPWNTVSAGAGGLSITGGSAFAG VHAESGGANDIISHGAINIKGHHGLQADGSNNLVTAHNGEVTISGSGGSYVDPGSGIHAANGGTNTITGNAPLTVAITTT GATAEKAIAMWADGGGSVNYITGHPRAGGPGDSVTLTANNGQGIAMQTENGGKNIITTGAGNDSVLINGAVKGNGNEINL GGGDNTLTINGAVQTGSLNVIAAGGTYTLVLQASNAENFAARYGD >Mature_284_residues SRHDISDEKWAIIRPMLAKTGTETRGRKRKDDRLIFNAILWIMKTGAPWRDLHPEFGPWNTVSAGAGGLSITGGSAFAGV HAESGGANDIISHGAINIKGHHGLQADGSNNLVTAHNGEVTISGSGGSYVDPGSGIHAANGGTNTITGNAPLTVAITTTG ATAEKAIAMWADGGGSVNYITGHPRAGGPGDSVTLTANNGQGIAMQTENGGKNIITTGAGNDSVLINGAVKGNGNEINLG GGDNTLTINGAVQTGSLNVIAAGGTYTLVLQASNAENFAARYGD
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28750; Mature: 28619
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHDISDEKWAIIRPMLAKTGTETRGRKRKDDRLIFNAILWIMKTGAPWRDLHPEFGPW CCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC NTVSAGAGGLSITGGSAFAGVHAESGGANDIISHGAINIKGHHGLQADGSNNLVTAHNGE CCCCCCCCCEEEECCCEEEEEEECCCCCCHHHCCCEEEECCCCCCCCCCCCCEEEEECCE VTISGSGGSYVDPGSGIHAANGGTNTITGNAPLTVAITTTGATAEKAIAMWADGGGSVNY EEEECCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEEE ITGHPRAGGPGDSVTLTANNGQGIAMQTENGGKNIITTGAGNDSVLINGAVKGNGNEINL EECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCEEEE GGGDNTLTINGAVQTGSLNVIAAGGTYTLVLQASNAENFAARYGD CCCCCEEEEECEEEECCEEEEEECCEEEEEEEECCCCCEEEECCC >Mature Secondary Structure SRHDISDEKWAIIRPMLAKTGTETRGRKRKDDRLIFNAILWIMKTGAPWRDLHPEFGPW CCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC NTVSAGAGGLSITGGSAFAGVHAESGGANDIISHGAINIKGHHGLQADGSNNLVTAHNGE CCCCCCCCCEEEECCCEEEEEEECCCCCCHHHCCCEEEECCCCCCCCCCCCCEEEEECCE VTISGSGGSYVDPGSGIHAANGGTNTITGNAPLTVAITTTGATAEKAIAMWADGGGSVNY EEEECCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEEE ITGHPRAGGPGDSVTLTANNGQGIAMQTENGGKNIITTGAGNDSVLINGAVKGNGNEINL EECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCEEEE GGGDNTLTINGAVQTGSLNVIAAGGTYTLVLQASNAENFAARYGD CCCCCEEEEECEEEECCEEEEEECCEEEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA